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1JRW
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BU of 1jrw by Molmil
Solution Structure of dAATAA DNA Bulge
分子名称: 5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*TP*AP*AP*GP*CP*TP*AP*CP*G)-3'
著者Gollmick, F.A, Lorenz, M, Dornberger, U, von Langen, J, Diekmann, S, Fritzsche, H.
登録日2001-08-15
公開日2002-08-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of dAATAA and dAAUAA DNA bulges.
Nucleic Acids Res., 30, 2002
4UEU
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BU of 4ueu by Molmil
Tyrosine kinase AS - a common ancestor of Src and Abl
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, TYROSINE KINASE AS - A COMMON ANCESTOR OF SRC AND ABL
著者Kutter, S, Wilson, C, Agafonov, R.V, Hoemberger, M.S, Zorba, A, Halpin, J.C, Theobald, D.L, Kern, D.
登録日2014-12-18
公開日2015-02-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Kinase Dynamics. Using Ancient Protein Kinases to Unravel a Modern Cancer Drug'S Mechanism.
Science, 347, 2015
6JNA
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BU of 6jna by Molmil
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate dehydrogenase
著者Oide, M, Kato, T, Oroguchi, T, Nakasako, M.
登録日2019-03-14
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.
Febs J., 287, 2020
6JN9
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BU of 6jn9 by Molmil
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate dehydrogenase
著者Oide, M, Kato, T, Oroguchi, T, Nakasako, M.
登録日2019-03-14
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.
Febs J., 287, 2020
6JNC
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BU of 6jnc by Molmil
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate dehydrogenase
著者Oide, M, Kato, T, Oroguchi, T, Nakasako, M.
登録日2019-03-14
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.
Febs J., 287, 2020
6JND
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BU of 6jnd by Molmil
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate dehydrogenase
著者Oide, M, Kato, T, Oroguchi, T, Nakasako, M.
登録日2019-03-14
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.
Febs J., 287, 2020
8DZF
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BU of 8dzf by Molmil
Cryo-EM structure of bundle-forming pilus extension ATPase from E.coli in the presence of AMP-PNP (class-2)
分子名称: BfpD, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ZINC ION
著者Nayak, A.R, Zhao, J, Donnenberg, M.S, Samso, M.
登録日2022-08-07
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Cryo-EM Structure of the Type IV Pilus Extension ATPase from Enteropathogenic Escherichia coli.
Mbio, 13, 2022
8DZE
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BU of 8dze by Molmil
Cryo-EM structure of bundle-forming pilus extension ATPase from E. coli in the presence of AMP-PNP (class-1)
分子名称: BfpD, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ZINC ION
著者Nayak, A.R, Zhao, J, Donnenberg, M.S, Samso, M.
登録日2022-08-07
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Cryo-EM Structure of the Type IV Pilus Extension ATPase from Enteropathogenic Escherichia coli.
Mbio, 13, 2022
8DZG
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BU of 8dzg by Molmil
Cryo-EM structure of bundle-forming pilus extension ATPase from E.coli in the presence of ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, BfpD, MAGNESIUM ION, ...
著者Nayak, A.R, Zhao, J, Donnenberg, M.S, Samso, M.
登録日2022-08-07
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM Structure of the Type IV Pilus Extension ATPase from Enteropathogenic Escherichia coli.
Mbio, 13, 2022
2KEZ
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BU of 2kez by Molmil
NMR structure of U6 ISL at pH 8.0
分子名称: RNA (5'-R(*GP*GP*UP*UP*CP*CP*CP*CP*UP*GP*CP*AP*UP*AP*AP*GP*GP*AP*UP*GP*AP*AP*CP*C)-3')
著者Venditti, V, Butcher, S.E.
登録日2009-02-08
公開日2009-07-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping.
J.Mol.Biol., 391, 2009
1YUG
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BU of 1yug by Molmil
TYPE ALPHA TRANSFORMING GROWTH FACTOR, NMR, 15 MODELS AFTER ECEPP/3 ENERGY MINIMIZATION
分子名称: TRANSFORMING GROWTH FACTOR ALPHA
著者Moy, F.J, Montelione, G.T, Scheraga, H.A.
登録日1996-04-01
公開日1996-08-17
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of human type-alpha transforming growth factor determined by heteronuclear NMR spectroscopy and refined by energy minimization with restraints.
Biochemistry, 32, 1993
1YUF
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BU of 1yuf by Molmil
TYPE ALPHA TRANSFORMING GROWTH FACTOR, NMR, 16 MODELS WITHOUT ENERGY MINIMIZATION
分子名称: TRANSFORMING GROWTH FACTOR ALPHA
著者Moy, F.J, Montelione, G.T, Scheraga, H.A.
登録日1996-04-01
公開日1996-08-17
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of human type-alpha transforming growth factor determined by heteronuclear NMR spectroscopy and refined by energy minimization with restraints.
Biochemistry, 32, 1993
2KF0
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BU of 2kf0 by Molmil
NMR structure of U6 ISL at pH 7.0
分子名称: RNA (5'-R(*GP*GP*UP*UP*CP*CP*CP*CP*UP*GP*CP*AP*UP*AP*AP*GP*GP*AP*UP*GP*AP*AP*CP*C)-3')
著者Venditti, V, Butcher, S.E.
登録日2009-02-08
公開日2009-07-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping.
J.Mol.Biol., 391, 2009
5EHB
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BU of 5ehb by Molmil
A de novo designed hexameric coiled-coil peptide with iodotyrosine
分子名称: pHiosYI
著者Lizatovic, R, Aurelius, O, Stenstrom, O, Drakenberg, T, Akke, M, Logan, D.T, Andre, I.
登録日2015-10-28
公開日2016-06-15
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch.
Structure, 24, 2016
1KBH
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BU of 1kbh by Molmil
Mutual Synergistic Folding in the Interaction Between Nuclear Receptor Coactivators CBP and ACTR
分子名称: CREB-BINDING PROTEIN, nuclear receptor coactivator
著者Demarest, S.J, Martinez-Yamout, M, Chung, J, Chen, H, Xu, W, Dyson, H.J, Evans, R.M, Wright, P.E.
登録日2001-11-06
公開日2002-02-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators.
Nature, 415, 2002
8CE0
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BU of 8ce0 by Molmil
N-terminal domain of human apolipoprotein E
分子名称: GLYCEROL, Maltodextrin-binding protein,Apolipoprotein E
著者Marek, M, Nemergut, M.
登録日2023-02-01
公開日2023-07-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer's Disease drug candidate.
Mol Neurodegener, 18, 2023
8CDY
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BU of 8cdy by Molmil
N-terminal domain of human apolipoprotein E
分子名称: Maltodextrin-binding protein,Apolipoprotein E
著者Marek, M, Nemergut, M.
登録日2023-02-01
公開日2023-07-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer's Disease drug candidate.
Mol Neurodegener, 18, 2023
4WBB
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BU of 4wbb by Molmil
Single Turnover Autophosphorylation Cycle of the PKA RIIb Holoenzyme
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Zhang, P, Knape, M.J, Ahuja, L.G, Keshwani, M.M, King, C.C, Sastri, M, Herberg, F.W, Taylor, S.S.
登録日2014-09-02
公開日2015-05-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Single Turnover Autophosphorylation Cycle of the PKA RII beta Holoenzyme.
Plos Biol., 13, 2015
5A5B
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BU of 5a5b by Molmil
Structure of the 26S proteasome-Ubp6 complex
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
著者Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F.
登録日2015-06-17
公開日2015-07-22
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 112, 2015
7NAC
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BU of 7nac by Molmil
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
分子名称: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
著者Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P.
登録日2021-06-21
公開日2022-11-09
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Nat.Struct.Mol.Biol., 29, 2022
7NAD
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BU of 7nad by Molmil
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model
分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L17-A, ...
著者Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P.
登録日2021-06-21
公開日2022-11-09
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Nat.Struct.Mol.Biol., 29, 2022
7NAF
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BU of 7naf by Molmil
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb1-MTD local model
分子名称: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
著者Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P.
登録日2021-06-21
公開日2022-11-09
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Nat.Struct.Mol.Biol., 29, 2022
2GDA
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BU of 2gda by Molmil
REFINED SOLUTION STRUCTURE OF THE GLUCOCORTICOID RECEPTOR DNA-BINDING DOMAIN
分子名称: GLUCOCORTICOID RECEPTOR, ZINC ION
著者Baumann, H, Paulsen, K, Kovacs, H, Berglund, H, Wright, A.P.H, Gustafsson, J.-A, Hard, T.
登録日1994-03-15
公開日1994-06-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Refined solution structure of the glucocorticoid receptor DNA-binding domain.
Biochemistry, 32, 1993
8AXC
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BU of 8axc by Molmil
Crystal structure of mouse Ces2c
分子名称: Acylcarnitine hydrolase, CHLORIDE ION, NICOTINAMIDE, ...
著者Eisner, H, Riegler-Berket, L, Rodriguez Gamez, C, Sagmeister, T, Chalhoub, G, Darnhofer, B, Panikkaveetil Jawaharlal, J, Birner-Gruenberger, R, Pavkov-Keller, T, Haemmerle, G, Schoiswohl, G, Oberer, M.
登録日2022-08-31
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The Crystal Structure of Mouse Ces2c, a Potential Ortholog of Human CES2, Shows Structural Similarities in Substrate Regulation and Product Release to Human CES1.
Int J Mol Sci, 23, 2022
8PD3
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BU of 8pd3 by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 2
分子名称: Sperm-specific sodium proton exchanger
著者Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
登録日2023-06-11
公開日2023-11-08
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023

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