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7KTD
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DNA Polymerase Mu, 8-oxodGTP:Ct Product State Ternary Complex, 10 mM Mn2+ (960min)
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Jamsen, J.A, Wilson, S.H.
登録日2020-11-24
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide.
Nat Commun, 12, 2021
7KTM
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DNA Polymerase Mu (K438D), 8-oxodGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (30min)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Jamsen, J.A, Wilson, S.H.
登録日2020-11-24
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide.
Nat Commun, 12, 2021
7KTJ
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DNA Polymerase Mu (K438D), 8-oxodGTP:Ct Pre-Catalytic Ground State Ternary Complex, 20 mM Ca2+ (120min)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Jamsen, J.A, Wilson, S.H.
登録日2020-11-24
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide.
Nat Commun, 12, 2021
7KTL
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BU of 7ktl by Molmil
DNA Polymerase Mu (K438D), 8-oxodGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (90min)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*CP*GP*GP*CP*CP*TP*AP*CP*G)-3'), ...
著者Jamsen, J.A, Wilson, S.H.
登録日2020-11-24
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.421 Å)
主引用文献Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide.
Nat Commun, 12, 2021
4LB2
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BU of 4lb2 by Molmil
X-ray study of human serum albumin complexed with idarubicin
分子名称: IDARUBICIN, SERUM ALBUMIN
著者Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
登録日2013-06-20
公開日2013-07-24
最終更新日2014-02-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
4PW8
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BU of 4pw8 by Molmil
Human tryptophan 2,3-dioxygenase
分子名称: COBALT (II) ION, Tryptophan 2,3-dioxygenase
著者Meng, B, Wu, D, Gu, J.H, Ouyang, S.Y, Ding, W, Liu, Z.J.
登録日2014-03-19
公開日2014-08-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural and functional analyses of human tryptophan 2,3-dioxygenase
Proteins, 82, 2014
4LB9
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BU of 4lb9 by Molmil
X-ray study of human serum albumin complexed with etoposide
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol-5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, MYRISTIC ACID, SERUM ALBUMIN
著者Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
登録日2013-06-20
公開日2013-07-24
最終更新日2014-02-19
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
5C1E
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BU of 5c1e by Molmil
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHLORIDE ION, ...
著者Jameson, G.B, Williams, M.A.K, Loo, T.S, Kent, L.M, Melton, L.D, Mercadante, D.
登録日2015-06-13
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Properties of a Non-processive, Salt-requiring, and Acidophilic Pectin Methylesterase from Aspergillus niger Provide Insights into the Key Determinants of Processivity Control.
J.Biol.Chem., 291, 2016
5C0Q
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BU of 5c0q by Molmil
Crystal structure of Zn bound CbsA from Thermotoga neapolitana
分子名称: Beta-N-acetylhexosaminidase, ZINC ION
著者Ha, N.C, Kim, J.S, Yoon, B.Y.
登録日2015-06-12
公開日2015-09-16
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
8GEW
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BU of 8gew by Molmil
H-FABP crystal soaked in a bromo palmitic acid solution
分子名称: 2-Bromopalmitic acid, Fatty acid-binding protein, heart, ...
著者Howard, E, Cousido-Siah, A, Alvarez, A, Espinosa, Y, Podjarny, A, Mitschler, A, Carlevaro, M.
登録日2023-03-07
公開日2023-08-30
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Lipid exchange in crystal-confined fatty acid binding proteins: X-ray evidence and molecular dynamics explanation.
Proteins, 91, 2023
6K1J
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BU of 6k1j by Molmil
Human nucleosome core particle with H2A.X variant
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2AX, ...
著者Sharma, D, De Falco, L, Davey, C.A.
登録日2019-05-10
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
1BW3
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BU of 1bw3 by Molmil
THREE-DIMENSIONAL STRUCTURE IN SOLUTION OF BARWIN, A PROTEIN FROM BARLEY SEED
分子名称: BARWIN, BASIC BARLEY SEED PROTEIN
著者Poulsen, F.M.
登録日1992-07-06
公開日1993-10-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Three-dimensional structure in solution of barwin, a protein from barley seed.
Biochemistry, 31, 1992
4QC9
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BU of 4qc9 by Molmil
Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant 3GD4
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Uracil-DNA glycosylase
著者Sartmatova, D, Nash, T, Schormann, N, Nuth, M, Ricciardi, R, Banerjee, S, Chattopadhyay, D.
登録日2014-05-09
公開日2015-05-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.259 Å)
主引用文献Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant 3GD4
To be Published
5CGB
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BU of 5cgb by Molmil
Crystal structure of FimH in complex with heptyl alpha-D-septanoside
分子名称: (6R)-1,6-anhydro-2-O-heptyl-6-(hydroxymethyl)-D-galactitol, Protein FimH, SULFATE ION
著者Jakob, R.P, Preston, R.P, Zihlmann, P, Fiege, B, Sager, C.P, Vannam, R, Rabbani, S, Zalewski, A, Maier, T, Ernst, B, Peczuh, M.
登録日2015-07-09
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The price of flexibility - a case study on septanoses as pyranose mimetics.
Chem Sci, 9, 2018
4QF3
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BU of 4qf3 by Molmil
Crystal structure of human BAZ2B PHD zinc finger in the free form
分子名称: Bromodomain adjacent to zinc finger domain protein 2B, ZINC ION
著者Tallant, C, Van Molle, I, Chirgadze, D.Y, Ciulli, A.
登録日2014-05-19
公開日2014-07-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC.
Structure, 23, 2015
8AXB
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BU of 8axb by Molmil
Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
分子名称: Cas12k, sgRNA
著者Tenjo-Castano, F, Sofos, N, Stella, S, Molina, R, Pape, T, Lopez-Mendez, B, Stutzke, L.S, Temperini, P, Montoya, G.
登録日2022-08-31
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Structural prediction of the Cas12k interaction with the transposon pre-integration complex
To Be Published
4QKR
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BU of 4qkr by Molmil
Crystal Structure of 6xTyr/PV2: de novo designed beta-trefoil architecture with symmetric primary structure (L22Y/L44Y/L64Y/L85Y/L108Y/L132Y, Primitive Version 2)
分子名称: DE NOVO PROTEIN 6XTYR/PV2, IMIDAZOLE
著者Longo, L.M, Blaber, M, Tenorio, C.A.
登録日2014-06-09
公開日2015-01-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.
Protein Sci., 24, 2015
5UWW
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BU of 5uww by Molmil
Crystal Structure of DEAF1 Peptide in complex with CRM1 K579A mutant-Ran-RanBP1
分子名称: Deformed epidermal autoregulatory factor 1 homolog, Exportin-1, GLYCEROL, ...
著者Fung, H.Y.J, Chook, Y.M.
登録日2017-02-21
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.152 Å)
主引用文献Nuclear export receptor CRM1 recognizes diverse conformations in nuclear export signals.
Elife, 6, 2017
4L8U
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BU of 4l8u by Molmil
X-ray study of human serum albumin complexed with 9 amino camptothecin
分子名称: (2S)-2-[1-amino-8-(hydroxymethyl)-9-oxo-9,11-dihydroindolizino[1,2-b]quinolin-7-yl]-2-hydroxybutanoic acid, MYRISTIC ACID, Serum albumin
著者Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
登録日2013-06-17
公開日2013-07-24
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
4LA0
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BU of 4la0 by Molmil
X-ray study of human serum albumin complexed with bicalutamide
分子名称: R-BICALUTAMIDE, SERUM ALBUMIN
著者Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
登録日2013-06-18
公開日2013-07-24
最終更新日2014-02-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
1YJ5
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BU of 1yj5 by Molmil
Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme
分子名称: 5' polynucleotide kinase-3' phosphatase FHA domain, 5' polynucleotide kinase-3' phosphatase catalytic domain, SULFATE ION
著者Bernstein, N.K, Williams, R.S, Rakovszky, M.L, Cui, D, Green, R, Karimi-Busheri, F, Mani, R.S, Galicia, S, Koch, C.A, Cass, C.E, Durocher, D, Weinfeld, M, Glover, J.N.M.
登録日2005-01-13
公開日2005-03-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The molecular architecture of the mammalian DNA repair enzyme, polynucleotide kinase.
Mol.Cell, 17, 2005
4Q5U
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BU of 4q5u by Molmil
Structure of calmodulin bound to its recognition site from calcineurin
分子名称: CALCIUM ION, Calmodulin, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
著者Guo, H, Dunlap, T.B, Creamer, T.P, Vander Kooi, C.W.
登録日2014-04-17
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Stoichiometry of the calcineurin regulatory domain-calmodulin complex.
Biochemistry, 53, 2014
1YJM
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BU of 1yjm by Molmil
Crystal structure of the FHA domain of mouse polynucleotide kinase in complex with an XRCC4-derived phosphopeptide.
分子名称: 12-mer peptide from DNA-repair protein XRCC4, Polynucleotide 5'-hydroxyl-kinase
著者Bernstein, N.K, Williams, R.S, Rakovszky, M.L, Cui, D, Green, R, Karimi-Busheri, F, Mani, R.S, Galicia, S, Koch, C.A, Cass, C.E, Durocher, D, Weinfeld, M, Glover, J.N.M.
登録日2005-01-14
公開日2005-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The molecular architecture of the mammalian DNA repair enzyme, polynucleotide kinase.
Mol.Cell, 17, 2005
2NLI
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BU of 2nli by Molmil
Crystal Structure of the complex between L-lactate oxidase and a substrate analogue at 1.59 angstrom resolution
分子名称: FLAVIN MONONUCLEOTIDE, HYDROGEN PEROXIDE, LACTIC ACID, ...
著者Furuichi, M, Suzuki, N, Balasundaresan, D, Yoshida, Y, Minagawa, H, Watanabe, Y, Kaneko, H, Waga, I, Kumar, P.K.R, Mizuno, H.
登録日2006-10-20
公開日2007-10-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献X-ray structures of Aerococcus viridans lactate oxidase and its complex with D-lactate at pH 4.5 show an alpha-hydroxyacid oxidation mechanism
J.Mol.Biol., 378, 2008
5UWJ
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BU of 5uwj by Molmil
Crystal Structure of FMRP NES Peptide in complex with CRM1-Ran-RanBP1
分子名称: Exportin-1, GLYCEROL, GTP-binding nuclear protein Ran, ...
著者Fung, H.Y.J, Chook, Y.M.
登録日2017-02-21
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.221 Å)
主引用文献Nuclear export receptor CRM1 recognizes diverse conformations in nuclear export signals.
Elife, 6, 2017

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