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5UM6
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BU of 5um6 by Molmil
Crystal Structure of S. pombe Uba1 in a closed conformation
分子名称: 2-(decylamino)ethane-1-thiol, N-(2-{[(4-chlorophenyl)methyl]disulfanyl}ethyl)decan-1-amine, SULFATE ION, ...
著者Lv, Z, Yuan, L, Aldana-Masangkay, G, Atkison, J.H, Chen, Y, Olsen, S.K.
登録日2017-01-26
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Domain alternation and active site remodeling are conserved structural features of ubiquitin E1.
J. Biol. Chem., 292, 2017
1ZJW
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BU of 1zjw by Molmil
Glutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNA
分子名称: ADENOSINE MONOPHOSPHATE, GLUTAMINE, Glutaminyl-tRNA, ...
著者Gruic-Sovulj, I, Uter, N, Bullock, T, Perona, J.J.
登録日2005-05-01
公開日2005-06-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献tRNA-dependent Aminoacyl-adenylate Hydrolysis by a Nonediting Class I Aminoacyl-tRNA Synthetase.
J.Biol.Chem., 280, 2005
8CVT
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BU of 8cvt by Molmil
Human 19S-20S proteasome, state SD2
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
著者Zhao, J.
登録日2022-05-18
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
3JBX
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BU of 3jbx by Molmil
Cryo-electron microscopy structure of RAG Signal End Complex (C2 symmetry)
分子名称: 5'-D(*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3', 5'-D(*GP*CP*GP*AP*TP*GP*GP*TP*TP*AP*AP*CP*CP*A)-3', 5'-D(P*GP*TP*CP*TP*GP*TP*AP*GP*CP*AP*CP*TP*GP*TP*G)-3', ...
著者Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
登録日2015-10-22
公開日2015-12-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
7BHP
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BU of 7bhp by Molmil
Cryo-EM structure of the human Ebp1 - 80S ribosome
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Desogus, J, Bhaskar, V, Chao, J.A.
登録日2021-01-11
公開日2021-02-03
最終更新日2021-03-31
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Dynamic association of human Ebp1 with the ribosome.
Rna, 27, 2021
2LAS
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BU of 2las by Molmil
Molecular Determinants of Paralogue-Specific SUMO-SIM Recognition
分子名称: M-IR2_peptide, Small ubiquitin-related modifier 1
著者Namanja, A, Li, Y, Su, Y, Wong, S, Lu, J, Colson, L, Wu, C, Li, S, Chen, Y.
登録日2011-03-20
公開日2011-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into High Affinity Small Ubiquitin-like Modifier (SUMO) Recognition by SUMO-interacting Motifs (SIMs) Revealed by a Combination of NMR and Peptide Array Analysis.
J.Biol.Chem., 287, 2012
2N1V
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BU of 2n1v by Molmil
Solution structure of human SUMO1
分子名称: Small ubiquitin-related modifier 1
著者Naik, M.T, Naik, N, Shih, H, Huang, T.
登録日2015-04-24
公開日2016-04-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of human SUMO
To Be Published
2N1A
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BU of 2n1a by Molmil
Docked structure between SUMO1 and ZZ-domain from CBP
分子名称: CREB-binding protein, Small ubiquitin-related modifier 1, ZINC ION
著者Diehl, C.
登録日2015-03-26
公開日2016-05-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Analysis of a Complex between Small Ubiquitin-like Modifier 1 (SUMO1) and the ZZ Domain of CREB-binding Protein (CBP/p300) Reveals a New Interaction Surface on SUMO.
J.Biol.Chem., 291, 2016
2MW5
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BU of 2mw5 by Molmil
Backbone fold of Human Small Ubiquitin like Modifier protein-1 (SUMO-1) based on Prot3D-NMR approach.
分子名称: Small ubiquitin-related modifier 1
著者Kumar, D, Jaiswal, N, Raikwal, N, Shukla, V, Arora, A.
登録日2014-10-28
公開日2014-12-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prot3DNMR: A simple and swift NMR strategy for Three-Dimentional structutral determination of proteins.
To be Published
2BYT
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BU of 2byt by Molmil
Thermus thermophilus Leucyl-tRNA synthetase complexed with a tRNAleu transcript in the post-editing conformation
分子名称: LEUCINE, LEUCYL-TRNA SYNTHETASE, MERCURY (II) ION, ...
著者Cusack, S, Tukalo, M, Yaremchuk, A, Fukunaga, R, Yokoyama, S.
登録日2005-08-04
公開日2005-09-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The Crystal Structure of Leucyl-tRNA Synthetase Complexed with tRNA(Leu) in the Post-Transfer-Editing Conformation.
Nat.Struct.Mol.Biol., 12, 2005
2KQS
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BU of 2kqs by Molmil
Phosphorylation of SUMO-interacting motif by CK2 enhances Daxx SUMO binding activity
分子名称: Death domain-associated protein 6, Small ubiquitin-related modifier 1
著者Naik, M.T, Huang, T.H, Shih, H.
登録日2009-11-17
公開日2010-12-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural and functional roles of Daxx SIM phosphorylation in SUMO paralog-selective binding and apoptosis modulation.
Mol.Cell, 42, 2011
3JBW
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BU of 3jbw by Molmil
Cryo-electron microscopy structure of RAG Paired Complex (with NBD, no symmetry)
分子名称: 12-RSS signal end forward strand, 5'-D(P*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3', Nicked 12-RSS intermediate reverse strand, ...
著者Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
登録日2015-10-21
公開日2015-12-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
8XN6
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BU of 8xn6 by Molmil
The Crystal Structure of GSK3b from Biortus.
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Glycogen synthase kinase-3 beta, ...
著者Wang, F, Cheng, W, Yuan, Z, Qi, J, Wu, B.
登録日2023-12-29
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of GSK3b from Biortus.
To Be Published
5VHH
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BU of 5vhh by Molmil
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 10, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-13
公開日2017-08-23
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
5VHI
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BU of 5vhi by Molmil
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 10, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-13
公開日2017-08-23
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
3RZW
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BU of 3rzw by Molmil
Crystal Structure of the Monobody ySMB-9 bound to human SUMO1
分子名称: GLYCEROL, Monobody ySMB-9, Small ubiquitin-related modifier 1
著者Gilbreth, R.N, Koide, S.
登録日2011-05-12
公開日2011-12-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold.
J.Mol.Biol., 415, 2012
8BPO
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BU of 8bpo by Molmil
Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER)
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Hopfler, M, Absmeier, E, Passmore, L.A, Hegde, R.S.
登録日2022-11-17
公開日2023-07-05
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Mechanism of ribosome-associated mRNA degradation during tubulin autoregulation.
Mol.Cell, 83, 2023
3JAG
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BU of 3jag by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
3JAH
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BU of 3jah by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
3JAI
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BU of 3jai by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
2DU7
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BU of 2du7 by Molmil
Crystal structure of Methanococcus jannacshii O-phosphoseryl-tRNA synthetase
分子名称: O-phosphoseryl-tRNA synthetase
著者Fukunaga, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-20
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea.
Nat.Struct.Mol.Biol., 14, 2007
1YVL
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BU of 1yvl by Molmil
Structure of Unphosphorylated STAT1
分子名称: 5-residue peptide, GOLD ION, Signal transducer and activator of transcription 1-alpha/beta
著者Mao, X, Ren, Z, Parker, G.N, Sondermann, H, Pastorello, M.A, Wang, W, McMurray, J.S, Demeler, B, Darnell Jr, J.E, Chen, X.
登録日2005-02-16
公開日2005-03-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural bases of unphosphorylated STAT1 association and receptor binding.
Mol.Cell, 17, 2005
3JBY
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BU of 3jby by Molmil
Cryo-electron microscopy structure of RAG Paired Complex (C2 symmetry)
分子名称: '-D(P*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3', 5'-D(P*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3', CALCIUM ION, ...
著者Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
登録日2015-10-22
公開日2015-12-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
7PZY
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BU of 7pzy by Molmil
Structure of the vacant Candida albicans 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-13
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0P
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BU of 7q0p by Molmil
Structure of the Candida albicans 80S ribosome in complex with anisomycin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-15
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022

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