Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5I61
DownloadVisualize
BU of 5i61 by Molmil
Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus
分子名称: Potential RNA-dependent RNA polymerase
著者Collier, A.M, Guo, Y.R, Tao, Y.J.
登録日2016-02-15
公開日2016-03-16
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA Virus.
Plos Pathog., 12, 2016
3OL9
DownloadVisualize
BU of 3ol9 by Molmil
Poliovirus polymerase elongation complex with 3'-deoxy-CTP
分子名称: ISOPROPYL ALCOHOL, PYROPHOSPHATE 2-, Polymerase, ...
著者Gong, P, Peersen, O.B.
登録日2010-08-25
公開日2010-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for active site closure by the poliovirus RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.USA, 107, 2010
3OL6
DownloadVisualize
BU of 3ol6 by Molmil
Poliovirus polymerase elongation complex
分子名称: ISOPROPYL ALCOHOL, Polymerase, RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), ...
著者Gong, P, Peersen, O.B.
登録日2010-08-25
公開日2010-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for active site closure by the poliovirus RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.USA, 107, 2010
5F3T
DownloadVisualize
BU of 5f3t by Molmil
Dengue serotype 3 RNA-dependent RNA polymerase bound to JF-31-MG46
分子名称: 2-(4-methoxy-3-phenyl-phenyl)ethanoic acid, RNA-DEPENDENT RNA POLYMERASE, ZINC ION
著者Noble, C.G.
登録日2015-12-03
公開日2016-02-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A Conserved Pocket in the Dengue Virus Polymerase Identified through Fragment-based Screening.
J.Biol.Chem., 291, 2016
3OLB
DownloadVisualize
BU of 3olb by Molmil
Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctp
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, ISOPROPYL ALCOHOL, Polymerase, ...
著者Gong, P, Peersen, O.B.
登録日2010-08-25
公開日2010-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural basis for active site closure by the poliovirus RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.USA, 107, 2010
2E9T
DownloadVisualize
BU of 2e9t by Molmil
Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP
分子名称: 5'-R(*GP*GP*GP*CP*CP*CP*(5FU))-3', 5'-R(P*UP*AP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2007-01-26
公開日2007-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
6S2L
DownloadVisualize
BU of 6s2l by Molmil
FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide
分子名称: GLYCEROL, Genome polyprotein
著者Verdaguer, N, Ferrer-Orta, C.
登録日2019-06-21
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献(F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase.
Molecules, 24, 2019
3NAH
DownloadVisualize
BU of 3nah by Molmil
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
分子名称: RNA dependent RNA polymerase, SULFATE ION
著者Kim, K.H, Lee, J.H, Alam, I, Park, Y, Kang, S.
登録日2010-06-02
公開日2011-06-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
To be Published
3NAI
DownloadVisualize
BU of 3nai by Molmil
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
分子名称: 5-FLUOROURACIL, GLYCEROL, MAGNESIUM ION, ...
著者Kim, K.H, Lee, J.H, Alam, I, Park, Y, Kang, S.
登録日2010-06-02
公開日2011-06-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
To be Published
5ZIT
DownloadVisualize
BU of 5zit by Molmil
Crystal structure of human Enterovirus D68 RdRp in complex with NADPH
分子名称: DI(HYDROXYETHYL)ETHER, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RdRp
著者Wang, M.L, Li, L, Chen, Y.P, Jiang, H, Zhang, Y, Su, D.
登録日2018-03-17
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.196 Å)
主引用文献Structure of the enterovirus D68 RNA-dependent RNA polymerase in complex with NADPH implicates an inhibitor binding site in the RNA template tunnel.
J.Struct.Biol., 2020
6AE4
DownloadVisualize
BU of 6ae4 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-694, Y471A mutant)
分子名称: RdRp catalytic
著者Liu, W, Gong, P.
登録日2018-08-03
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
5FSW
DownloadVisualize
BU of 5fsw by Molmil
RNA dependent RNA polymerase QDE-1 from Thielavia terrestris
分子名称: RNA DEPENDENT RNA POLYMERASE QDE-1
著者Qian, X, Hamid, F.M, El Sahili, A, Darwis, D.A, Wong, Y.H, Bhushan, S, Makeyev, E.V, Lescar, J.
登録日2016-01-08
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Functional Evolution in Orthologous Cell-Encoded RNA-Dependent RNA Polymerases
J.Biol.Chem., 291, 2016
5YF8
DownloadVisualize
BU of 5yf8 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A-E472A mutant)
分子名称: ACETATE ION, RdRp catalytic
著者Liu, W, Gong, P.
登録日2017-09-20
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.396 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
5YF6
DownloadVisualize
BU of 5yf6 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-682)
分子名称: RdRp catalytic
著者Liu, W, Gong, P.
登録日2017-09-20
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
5YF7
DownloadVisualize
BU of 5yf7 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672)
分子名称: RdRp catalytic
著者Liu, W, Gong, P.
登録日2017-09-20
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
5YF5
DownloadVisualize
BU of 5yf5 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-694)
分子名称: RdRp catalytic
著者Liu, W, Gong, P.
登録日2017-09-20
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
3N6M
DownloadVisualize
BU of 3n6m by Molmil
Crystal structure of EV71 RdRp in complex with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, NICKEL (II) ION, RNA-dependent RNA polymerase
著者Wu, Y, Lou, Z.Y, Miao, Y, Yu, Y, Rao, Z.H.
登録日2010-05-26
公開日2011-06-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of EV71 RNA-dependent RNA polymerase in complex with substrate and analogue provide a drug target against the hand-foot-and-mouth disease pandemic in China.
Protein Cell, 1, 2010
5F8J
DownloadVisualize
BU of 5f8j by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S4 Form)
分子名称: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
著者Shu, B, Gong, P.
登録日2015-12-09
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.675 Å)
主引用文献Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
3N6N
DownloadVisualize
BU of 3n6n by Molmil
crystal structure of EV71 RdRp in complex with Br-UTP
分子名称: 5-bromouridine 5'-(tetrahydrogen triphosphate), NICKEL (II) ION, RNA-dependent RNA polymerase
著者Wu, Y, Lou, Z.Y, Miao, Y, Yu, Y, Rao, Z.H.
登録日2010-05-26
公開日2011-06-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of EV71 RNA-dependent RNA polymerase in complex with substrate and analogue provide a drug target against the hand-foot-and-mouth disease pandemic in China.
Protein Cell, 1, 2010
5F8M
DownloadVisualize
BU of 5f8m by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form)
分子名称: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
著者Shu, B, Gong, P.
登録日2015-12-09
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
6AE6
DownloadVisualize
BU of 6ae6 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 2)
分子名称: ACETATE ION, RdRp catalytic
著者Liu, W, Gong, P.
登録日2018-08-03
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.856 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
6AE7
DownloadVisualize
BU of 6ae7 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, E472A mutant)
分子名称: ACETATE ION, RdRp catalytic
著者Liu, W, Gong, P.
登録日2018-08-03
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
6AE5
DownloadVisualize
BU of 6ae5 by Molmil
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 1)
分子名称: RdRp catalytic
著者Liu, W, Gong, P.
登録日2018-08-03
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.754 Å)
主引用文献A unique intra-molecular fidelity-modulating mechanism identified in a viral RNA-dependent RNA polymerase.
Nucleic Acids Res., 46, 2018
6TZ1
DownloadVisualize
BU of 6tz1 by Molmil
In situ structure of BmCPV RNA-dependent RNA polymerase at early-elongation state
分子名称: Non-template RNA (5'-D(*(GTA))-R(P*GP*UP*A)-3'), RNA-dependent RNA Polymerase, Template RNA (5'-R(P*AP*GP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
著者Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
登録日2019-08-09
公開日2019-11-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ2
DownloadVisualize
BU of 6tz2 by Molmil
In situ structure of BmCPV RNA-dependent RNA polymerase at elongation state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-template RNA (36-MER), ...
著者Cui, Y.X, Zhang, Y.N, Sun, J.C, Zhou, Z.H.
登録日2019-08-09
公開日2019-11-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon