Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2QX7
DownloadVisualize
BU of 2qx7 by Molmil
Structure of Eugenol Synthase from Ocimum basilicum
分子名称: Eugenol synthase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Louie, G.V, Noel, J.P, Bowman, M.E.
登録日2007-08-10
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and reaction mechanism of basil eugenol synthase
Plos One, 2, 2007
6UE0
DownloadVisualize
BU of 6ue0 by Molmil
Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION
著者Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P.
登録日2019-09-20
公開日2020-02-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens.
Febs Lett., 594, 2020
6I38
DownloadVisualize
BU of 6i38 by Molmil
Crystal structure of nv2Pizza6-AYW, a circularly permuted designer protein
分子名称: nv2Pizza6-AYW
著者Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D.
登録日2018-11-05
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein.
Protein Sci., 2020
6I4H
DownloadVisualize
BU of 6i4h by Molmil
Crystal Structure of Plasmodium falciparum actin I (F54Y mutant) in the Ca-ATP state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-1, CALCIUM ION, ...
著者Kumpula, E.-P, Lopez, A.J, Tajedin, L, Han, H, Kursula, I.
登録日2018-11-09
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
Plos Biol., 17, 2019
6ULU
DownloadVisualize
BU of 6ulu by Molmil
D104A/S128A S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-10-08
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
6UMX
DownloadVisualize
BU of 6umx by Molmil
Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015
分子名称: GL29H4-16 Fab Heavy Chain,GL29H4-16 Fab Heavy Chain, GL29H4-16 Fab Light Chain,GL29H4-16 Fab Light Chain, GLYCEROL, ...
著者Dagbay, K.B, Treece, E, Streich Jr, F.C, Jackson, J.W, Faucette, R.R, Nikiforov, A, Lin, S.C, Bostion, C.J, Nicholls, S.B, Capili, A.D, Carven, G.J.
登録日2019-10-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural basis of specific inhibition of extracellular activation of pro- or latent myostatin by the monoclonal antibody SRK-015.
J.Biol.Chem., 295, 2020
6TX0
DownloadVisualize
BU of 6tx0 by Molmil
Crystal structure of tetrameric human D137N-SAMHD1 (residues 109-626) with XTP, dAMPNPP and Mg
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, ...
著者Morris, E.R, Kunzelmann, S, Caswell, S.J, Arnold, L.H, Purkiss, A.G, Kelly, G, Taylor, I.A.
登録日2020-01-13
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structures of SAMHD1 inhibitor complexes reveal the mechanism of water-mediated dNTP hydrolysis.
Nat Commun, 11, 2020
6TV4
DownloadVisualize
BU of 6tv4 by Molmil
CFF-Notum complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CAFFEINE, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-01-08
公開日2020-10-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Caffeine inhibits Notum activity by binding at the catalytic pocket.
Commun Biol, 3, 2020
8BWK
DownloadVisualize
BU of 8bwk by Molmil
Metagenomic derived PL6 alginate lyase
分子名称: Alginate lyase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Angen, E.F, Wilkens, C.
登録日2022-12-06
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Metagenomic derived PL6 alginate lyase
To Be Published
6ZWX
DownloadVisualize
BU of 6zwx by Molmil
Crystal structure of E. coli RNA helicase HrpA
分子名称: ATP-dependent RNA helicase HrpA
著者Grass, L.M, Wollenhaupt, J, Barthel, T, Loll, B, Wahl, M.C.
登録日2020-07-29
公開日2021-06-30
最終更新日2021-08-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Large-scale ratcheting in a bacterial DEAH/RHA-type RNA helicase that modulates antibiotics susceptibility.
Proc.Natl.Acad.Sci.USA, 118, 2021
8BX1
DownloadVisualize
BU of 8bx1 by Molmil
Oct4/Sox2 protein:DNA complex
分子名称: HOXB1_f, HOXB1_r, POU domain, ...
著者Chojnowski, G, Wilmanns, M, Round, E.
登録日2022-12-07
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Oct4-Soc2-HoxB1 complex
To Be Published
2C0N
DownloadVisualize
BU of 2c0n by Molmil
Crystal Structure of A197 from STIV
分子名称: 1,4-DIETHYLENE DIOXIDE, A197, NICKEL (II) ION, ...
著者Larson, E.T, Reiter, D, Young, M, Lawrence, C.M.
登録日2005-09-06
公開日2005-09-29
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of A197 from Sulfolobus Turreted Icosahedral Virus: A Crenarchaeal Viral Glycosyltransferase Exhibiting the Gt-A Fold.
J.Virol., 80, 2006
5R4H
DownloadVisualize
BU of 5r4h by Molmil
PanDDA analysis group deposition -- CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF in complex with FMOPL000287a
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIMETHYL SULFOXIDE, Nucleosome-remodeling factor subunit BPTF, ...
著者Talon, R, Krojer, T, Fairhead, M, Sethi, R, Bradley, A.R, Aimon, A, Collins, P, Brandao-Neto, J, Douangamath, A, Wright, N, MacLean, E, Renjie, Z, Dias, A, Brennan, P.E, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2020-02-24
公開日2020-04-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献PanDDA analysis group deposition
To Be Published
2YPW
DownloadVisualize
BU of 2ypw by Molmil
Atomic model for the N-terminus of TraO fitted in the full-length structure of the bacterial pKM101 type IV secretion system core complex
分子名称: TRAO
著者Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
登録日2012-11-02
公開日2013-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12.4 Å)
主引用文献Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
3V99
DownloadVisualize
BU of 3v99 by Molmil
S663D Stable-5-LOX in complex with Arachidonic Acid
分子名称: ARACHIDONIC ACID, Arachidonate 5-lipoxygenase, FE (II) ION
著者Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
登録日2011-12-23
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012
3VBH
DownloadVisualize
BU of 3vbh by Molmil
Crystal structure of formaldehyde treated human enterovirus 71 (space group R32)
分子名称: CHLORIDE ION, Genome Polyprotein, capsid protein VP1, ...
著者Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
登録日2012-01-02
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
2BQ4
DownloadVisualize
BU of 2bq4 by Molmil
Crystal structure of type I cytochrome c3 from Desulfovibrio africanus
分子名称: BASIC CYTOCHROME C3, CALCIUM ION, HEME C
著者Czjzek, M, Pieulle, L, Morelli, X, Guerlesquin, F, Hatchikian, E.C.
登録日2005-04-27
公開日2005-05-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献The Type I / Type II Cytochrome C(3) Complex: An Electron Transfer Link in the Hydrogen-Sulfate Reduction Pathway.
J.Mol.Biol., 354, 2005
6E0A
DownloadVisualize
BU of 6e0a by Molmil
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, CHLORIDE ION, ...
著者Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
登録日2018-07-06
公開日2018-09-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
8BBJ
DownloadVisualize
BU of 8bbj by Molmil
Secretagogin (mouse) in complex with its target peptide from Syntaxin-4
分子名称: CACODYLATE ION, CALCIUM ION, Green fluorescent protein,Syntaxin-4, ...
著者Schnell, R, Szodorai, E.
登録日2022-10-13
公開日2024-04-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A hydrophobic groove in secretagogin allows for alternate interactions with SNAP-25 and syntaxin-4 in endocrine tissues.
Proc.Natl.Acad.Sci.USA, 121, 2024
8BAN
DownloadVisualize
BU of 8ban by Molmil
Secretagogin (mouse) in complex with its target peptide from SNAP-25
分子名称: CALCIUM ION, Green fluorescent protein,Synaptosomal-associated protein 25, Secretagogin
著者Schnell, R, Szodorai, E.
登録日2022-10-11
公開日2024-04-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A hydrophobic groove in secretagogin allows for alternate interactions with SNAP-25 and syntaxin-4 in endocrine tissues.
Proc.Natl.Acad.Sci.USA, 121, 2024
6E0G
DownloadVisualize
BU of 6e0g by Molmil
Mitochondrial peroxiredoxin from Leishmania infantum after heat stress without unfolding client protein
分子名称: mitochondrial 2-cys-peroxiredoxin
著者Teixeira, F, Tse, E, Makepeace, K.A.T, Borchers, C.H, Castro, H, Tomas, A.M, Poole, L.B, Southworth, D.R, Jakob, U.
登録日2018-07-06
公開日2019-02-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Chaperone activation and client binding of a 2-cysteine peroxiredoxin.
Nat Commun, 10, 2019
8BAV
DownloadVisualize
BU of 8bav by Molmil
Secretagogin (human) in complex with its target peptide from SNAP-25
分子名称: ACETATE ION, CALCIUM ION, Green fluorescent protein,Synaptosomal-associated protein 25, ...
著者Schnell, R, Szodorai, E.
登録日2022-10-12
公開日2024-04-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A hydrophobic groove in secretagogin allows for alternate interactions with SNAP-25 and syntaxin-4 in endocrine tissues.
Proc.Natl.Acad.Sci.USA, 121, 2024
8BWH
DownloadVisualize
BU of 8bwh by Molmil
Small molecule stabilizer for 14-3-3/ChREBP (Cmd 42)
分子名称: 14-3-3 protein sigma, Carbohydrate-responsive element-binding protein, MAGNESIUM ION, ...
著者Pennings, M.A.M, Visser, E.J, Ottmann, C.
登録日2022-12-06
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular glues of the regulatory ChREBP/14-3-3 complex protect beta cells from glucolipotoxicity.
Biorxiv, 2024
8BWE
DownloadVisualize
BU of 8bwe by Molmil
Small molecule stabilizer for 14-3-3/ChREBP (Cmd 43)
分子名称: 14-3-3 protein sigma, Carbohydrate-responsive element-binding protein, MAGNESIUM ION, ...
著者Visser, E.J, Pennings, M.A.M, Ottmann, C.
登録日2022-12-06
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular glues of the regulatory ChREBP/14-3-3 complex protect beta cells from glucolipotoxicity.
Biorxiv, 2024
6OAF
DownloadVisualize
BU of 6oaf by Molmil
Sudan virus nucleoprotein core domain in complex with VP35 chaperoning peptide
分子名称: Polymerase cofactor VP35,Nucleoprotein
著者Landeras-Bueno, S, Oda, S, Norris, M.J, Li Salie, Z, Ollmann Saphire, E.
登録日2019-03-15
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Sudan Ebolavirus VP35-NP Crystal Structure Reveals a Potential Target for Pan-Filovirus Treatment.
Mbio, 10, 2019

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon