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6UWR
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Clostridium difficile binary toxin translocase CDTb in asymmetric tetradecamer conformation
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Xu, X, Pozharski, E, des Georges, A.
登録日2019-11-05
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
7N0J
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BU of 7n0j by Molmil
Structure of YebY from E. coli K12
分子名称: YebY
著者Hadley, R.C, Rosenzweig, A.C.
登録日2021-05-25
公開日2022-03-09
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The copper-linked Escherichia coli AZY operon: Structure, metal binding, and a possible physiological role in copper delivery.
J.Biol.Chem., 298, 2022
7SQD
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BU of 7sqd by Molmil
Cryo-EM structure of the Achromobacter flagellar filament
分子名称: Flagellin
著者Kreutzberger, M.A, Wang, F, Egelman, E.H.
登録日2021-11-05
公開日2022-03-16
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
7AF8
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Bacterial 30S ribosomal subunit assembly complex state E (head domain)
分子名称: 16SrRNA (head domain of the 30S ribosome, 30S ribosomal protein S10, 30S ribosomal protein S13, ...
著者Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Fucini, P, Connell, S.
登録日2020-09-19
公開日2021-07-07
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
6EXN
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BU of 6exn by Molmil
Post-catalytic P complex spliceosome with 3' splice site docked
分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Intron lariat: UBC4 RNA, ...
著者Wilkinson, M.E, Fica, S.M, Galej, W.P, Norman, C.M, Newman, A.J, Nagai, K.
登録日2017-11-08
公開日2018-01-17
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Postcatalytic spliceosome structure reveals mechanism of 3'-splice site selection.
Science, 358, 2017
5J30
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Thermus thermophilus 70S termination complex containing E. coli RF1
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Dunham, C.M.
登録日2016-03-30
公開日2016-10-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Uniformity of Peptide Release Is Maintained by Methylation of Release Factors.
Cell Rep, 17, 2016
1A16
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AMINOPEPTIDASE P FROM E. COLI WITH THE INHIBITOR PRO-LEU
分子名称: AMINOPEPTIDASE P, LEUCINE, MANGANESE (II) ION, ...
著者Wilce, M.C, Bond, C.S, Lilley, P.E, Dixon, N.E, Freeman, H.C, Guss, J.M.
登録日1997-12-22
公開日1999-04-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and mechanism of a proline-specific aminopeptidase from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 95, 1998
6X9Q
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Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 27 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-06-03
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
1ALH
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BU of 1alh by Molmil
KINETICS AND CRYSTAL STRUCTURE OF A MUTANT E. COLI ALKALINE PHOSPHATASE (ASP-369-->ASN): A MECHANISM INVOLVING ONE ZINC PER ACTIVE SITE
分子名称: ALKALINE PHOSPHATASE, PHOSPHATE ION, SULFATE ION, ...
著者Tibbitts, T.T, Xu, X, Kantrowitz, E.R.
登録日1994-08-23
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetics and crystal structure of a mutant Escherichia coli alkaline phosphatase (Asp-369-->Asn): a mechanism involving one zinc per active site.
Protein Sci., 3, 1994
7Q1D
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BU of 7q1d by Molmil
Acetyltrasferase(3) type IIIa in complex with 3-N-methyl-nemycin B
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aminoglycoside N(3)-acetyltransferase III, CHLORIDE ION, ...
著者Pontillo, N, Guskov, A.
登録日2021-10-18
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献3-N-alkylation in aminoglycoside antibiotic neomycin B overcomes bacterial resistance mediated by acetyltransferase (3) IIIa
To Be Published
6P7O
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BU of 6p7o by Molmil
Structure of E. coli MS115-1 NucC, Apo form
分子名称: CHLORIDE ION, E. coli MS115-1 NucC, HEXAETHYLENE GLYCOL, ...
著者Ye, Q, Lau, R.K, Berg, K.R, Corbett, K.D.
登録日2019-06-06
公開日2019-12-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Structure and Mechanism of a Cyclic Trinucleotide-Activated Bacterial Endonuclease Mediating Bacteriophage Immunity.
Mol.Cell, 77, 2020
7Q4K
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BU of 7q4k by Molmil
Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fostier, C.R, Ousalem, F, Soufari, H, Leroy, E.C, Ngo, S, Innis, A, Hashem, Y, Boel, G.
登録日2021-10-31
公開日2022-11-16
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Regulation of the macrolide resistance ABC-F translation factor MsrD.
Nat Commun, 14, 2023
8A1V
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Sodium pumping NADH-quinone oxidoreductase with substrate Q2
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-06-14
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
8A1W
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BU of 8a1w by Molmil
Sodium pumping NADH-quinone oxidoreductase with substrate Q1
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-06-14
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
6SRI
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BU of 6sri by Molmil
Structure of the Fanconi anaemia core complex
分子名称: Fanconi anaemia protein FANCL, Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF), ...
著者Shakeel, S, Rajendra, E, Alcon, P, He, S, Scheres, S.H.W, Passmore, L.A.
登録日2019-09-05
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of the Fanconi anaemia monoubiquitin ligase complex.
Nature, 575, 2019
8A1T
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Sodium pumping NADH-quinone oxidoreductase
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-06-14
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
8A1X
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BU of 8a1x by Molmil
Sodium pumping NADH-quinone oxidoreductase with inhibitor DQA
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-06-14
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
8A1Y
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BU of 8a1y by Molmil
Sodium pumping NADH-quinone oxidoreductase with inhibitor HQNO
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, DODECYL-BETA-D-MALTOSIDE, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-06-14
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
8A1U
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BU of 8a1u by Molmil
Sodium pumping NADH-quinone oxidoreductase with substrates NADH and Q2
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DODECYL-BETA-D-MALTOSIDE, ...
著者Hau, J.-L, Kaltwasser, S, Vonck, J, Fritz, G, Steuber, J.
登録日2022-06-02
公開日2023-09-20
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Conformational coupling of redox-driven Na + -translocation in Vibrio cholerae NADH:quinone oxidoreductase.
Nat.Struct.Mol.Biol., 30, 2023
7NWG
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BU of 7nwg by Molmil
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
分子名称: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S ribosomal protein S10, ...
著者Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C.
登録日2021-03-16
公開日2021-07-07
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.
Nucleic Acids Res., 49, 2021
7RYG
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A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S
分子名称: (4S,4aS,5aR,12aS)-4-(diethylamino)-3,10,12,12a-tetrahydroxy-1,11-dioxo-8-[(2S)-pyrrolidin-2-yl]-7-(trifluoromethyl)-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, 16S Ribosomal RNA, 23S ribosomal RNA, ...
著者Morgan, C.E, Yu, E.W.
登録日2021-08-25
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献An Analysis of the Novel Fluorocycline TP-6076 Bound to Both the Ribosome and Multidrug Efflux Pump AdeJ from Acinetobacter baumannii.
Mbio, 13, 2022
7QFP
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BU of 7qfp by Molmil
Cryo-EM structure of Botulinum neurotoxin serotype E
分子名称: Botulinum neurotoxin
著者Kosenina, S, Martinez-Carranza, M, Davies, J.R, Masuyer, G, Stenmark, P.
登録日2021-12-06
公開日2022-01-26
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Analysis of Botulinum Neurotoxins Type B and E by Cryo-EM.
Toxins, 14, 2021
7QGM
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BU of 7qgm by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with MRS4598 (a 3-methyl-CMPCP derivative, compound 16 in paper) in the closed state (crystal form III)
分子名称: 5'-nucleotidase, CALCIUM ION, ZINC ION, ...
著者Strater, N.
登録日2021-12-08
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-Activity Relationship of 3-Methylcytidine-5'-alpha , beta-methylenediphosphates as CD73 Inhibitors.
J.Med.Chem., 65, 2022
7QGL
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Human CD73 (ecto 5'-nucleotidase) in complex with MRS4602 (a 3-methyl-CMPCP derivative, compound 21 in paper) in the open state
分子名称: 5'-nucleotidase, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
著者Strater, N.
登録日2021-12-08
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-Activity Relationship of 3-Methylcytidine-5'-alpha , beta-methylenediphosphates as CD73 Inhibitors.
J.Med.Chem., 65, 2022
6X7K
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Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-05-30
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020

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