Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8QM0
DownloadVisualize
BU of 8qm0 by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AmiA in complex with Peptide 5
分子名称: ALA-LYS-THR-ILE-LYS-ILE-THR-GLN-THR-ARG, Oligopeptide-binding protein AmiA
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-20
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLV
DownloadVisualize
BU of 8qlv by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 4
分子名称: Oligopeptide-binding protein AliB, VAL-MET-VAL-LYS-GLY-PRO-GLY-PRO-GLY-ARG
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-20
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLR
DownloadVisualize
BU of 8qlr by Molmil
Human MST3 (STK24) kinase in complex with inhibitor MR24
分子名称: 1,2-ETHANEDIOL, 8-(4-azanylbutyl)-2-[1,3-bis(oxidanyl)propan-2-ylamino]-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
著者Balourdas, D.I, Rak, M, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2023-09-20
公開日2023-11-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of Selective Pyrido[2,3- d ]pyrimidin-7(8 H )-one-Based Mammalian STE20-Like (MST3/4) Kinase Inhibitors.
J.Med.Chem., 67, 2024
8QLM
DownloadVisualize
BU of 8qlm by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 3
分子名称: Oligopeptide-binding protein AliB, PRO-ILE-VAL-GLY-GLY-HIS-GLU-GLY-ALA-GLY-VAL
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-20
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLK
DownloadVisualize
BU of 8qlk by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 2
分子名称: ALA-ILE-GLN-SER-GLU-LYS-ALA-ARG-LYS-HIS-ASN, Oligopeptide-binding protein AliB
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-20
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLJ
DownloadVisualize
BU of 8qlj by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with an unknown peptide
分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, Oligopeptide-binding protein AliB
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-20
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLH
DownloadVisualize
BU of 8qlh by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliC as a domain-swapped dimer
分子名称: AliC
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-19
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLG
DownloadVisualize
BU of 8qlg by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliD in closed conformation in complex with Peptide 1
分子名称: AliD, Peptide 1, ZINC ION
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-19
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QLD
DownloadVisualize
BU of 8qld by Molmil
Bacteriophage T5 dUTPase mutant with loop deletion (30-35 aa)
分子名称: CHLORIDE ION, Deoxyuridine 5'-triphosphate nucleotidohydrolase, GLYCEROL, ...
著者Gabdulkhakov, A.G, Dzhus, U.F, Selikhanov, G.K, Glukhov, A.S.
登録日2023-09-19
公開日2024-01-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Bacteriophage T5 dUTPase: Combination of Common Enzymatic and Novel Functions.
Int J Mol Sci, 25, 2024
8QLC
DownloadVisualize
BU of 8qlc by Molmil
Crystal structure of the pneumococcal Substrate-binding protein AliD in open conformation
分子名称: AliD, MAGNESIUM ION
著者Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J.
登録日2023-09-19
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
Plos Pathog., 20, 2024
8QL0
DownloadVisualize
BU of 8ql0 by Molmil
Structure of human PAD6 Phosphomimic mutant V10E/S446E, apo
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ranaivoson, F.M, Beaumont, E.
登録日2023-09-18
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.675 Å)
主引用文献Crystal structure of human peptidylarginine deiminase type VI (PAD6) provides insights into its inactivity.
Iucrj, 11, 2024
8QKY
DownloadVisualize
BU of 8qky by Molmil
Bacteriophage T5 dUTPase
分子名称: Deoxyuridine 5'-triphosphate nucleotidohydrolase, GLYCEROL
著者Gabdulkhakov, A.G, Dzhus, U.F, Selikhanov, G.K, Glukhov, A.S.
登録日2023-09-18
公開日2024-01-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bacteriophage T5 dUTPase: Combination of Common Enzymatic and Novel Functions.
Int J Mol Sci, 25, 2024
8QKT
DownloadVisualize
BU of 8qkt by Molmil
Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
分子名称: DNA (167-MER), Histone H2A, Histone H2B type 1-J, ...
著者Ma, Z, Davey, C.A.
登録日2023-09-17
公開日2023-10-18
実験手法X-RAY DIFFRACTION (3.261 Å)
主引用文献Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
To Be Published
8QKJ
DownloadVisualize
BU of 8qkj by Molmil
PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MAM-133)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MAM-133), ...
著者Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
登録日2023-09-15
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.767 Å)
主引用文献Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
8QKG
DownloadVisualize
BU of 8qkg by Molmil
PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MAM-125)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MAM-125), ...
著者Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
登録日2023-09-15
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.538 Å)
主引用文献Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
8QKE
DownloadVisualize
BU of 8qke by Molmil
PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MH-13)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MH-13), ...
著者Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
登録日2023-09-15
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.504 Å)
主引用文献Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
8QJR
DownloadVisualize
BU of 8qjr by Molmil
BRG1 bromodomain in complex with VBC via compound 17
分子名称: (2S,4R)-1-[(2R)-2-[3-[2-[4-[3-[4-[(1R,5S)-3-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]-3,8-diazabicyclo[3.2.1]octan-8-yl]pyridin-2-yl]oxycyclobutyl]oxypiperidin-1-yl]ethoxy]-1,2-oxazol-5-yl]-3-methyl-butanoyl]-N-[(1S)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide, CHLORIDE ION, Elongin-B, ...
著者Kerry, P.S, Hole, A.J, Perez-Dorado, J.I.
登録日2023-09-13
公開日2024-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献PROTACs Targeting BRM (SMARCA2) Afford Selective In Vivo Degradation over BRG1 (SMARCA4) and Are Active in BRG1 Mutant Xenograft Tumor Models.
J.Med.Chem., 67, 2024
8QIJ
DownloadVisualize
BU of 8qij by Molmil
Crystallographic Structure of a Salicylate Synthase from M. abscessus (Mab-SaS)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Cassetta, A, Covaceuszach, S, Tomaiuolo, M, Meneghetti, F, Villa, S, Mori, M, Chiarelli, L.R, Mangiatordi, G.F.
登録日2023-09-12
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.073 Å)
主引用文献Structural basis for specific inhibition of salicylate synthase from Mycobacterium abscessus.
Eur.J.Med.Chem., 265, 2024
8QIC
DownloadVisualize
BU of 8qic by Molmil
Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors
分子名称: 2-oxidanyl-5-[[4-(phenylmethyl)phenyl]sulfamoyl]benzoic acid, GLYCEROL, Threonine--tRNA ligase, ...
著者Rodriguez, J.A, Parisini, E.
登録日2023-09-13
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors.
Plos One, 19, 2024
8QHR
DownloadVisualize
BU of 8qhr by Molmil
Crystal structure of the human DNPH1 glycosyl-enzyme intermediate
分子名称: 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE, 1,2-ETHANEDIOL, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, ...
著者Rzechorzek, N.J, West, S.C.
登録日2023-09-09
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanism of substrate hydrolysis by the human nucleotide pool sanitiser DNPH1.
Nat Commun, 14, 2023
8QHQ
DownloadVisualize
BU of 8qhq by Molmil
Crystal structure of human DNPH1 bound to hmdUMP
分子名称: 1,2-ETHANEDIOL, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, 5-HYDROXYMETHYLURIDINE-2'-DEOXY-5'-MONOPHOSPHATE
著者Rzechorzek, N.J, West, S.C.
登録日2023-09-09
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Mechanism of substrate hydrolysis by the human nucleotide pool sanitiser DNPH1.
Nat Commun, 14, 2023
8QHP
DownloadVisualize
BU of 8qhp by Molmil
Cysteine tRNA ligase homodimer
分子名称: Cysteine--tRNA ligase, ZINC ION
著者Pacesa, M, Correia, B.E, Levy, E.D.
登録日2023-09-08
公開日2023-11-29
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8QHM
DownloadVisualize
BU of 8qhm by Molmil
DNA mimic Foldamer with sticky ends
分子名称: DNA mimic Foldamer
著者Deepak, D, Loos, M, Huc, I.
登録日2023-09-08
公開日2023-10-11
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Enhancing the Features of DNA Mimic Foldamers for Structural Investigations.
Chemistry, 30, 2024
8QHK
DownloadVisualize
BU of 8qhk by Molmil
Crystal structure of reduced respiratory Complex I subunits NuoEF from Aquifex aeolicus bound to reduced 3-acetylpyridine adenine dinucleotide
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ACETYL PYRIDINE ADENINE DINUCLEOTIDE, REDUCED, ...
著者Wohlwend, D, Friedrich, T, Bucka, S.
登録日2023-09-08
公開日2024-04-03
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structures of 3-acetylpyridine adenine dinucleotide and ADP-ribose bound to the electron input module of respiratory complex I.
Structure, 32, 2024
8QHE
DownloadVisualize
BU of 8qhe by Molmil
Crystal structure IR-09
分子名称: 6-phosphogluconate dehydrogenase NADP-binding domain-containing protein, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Levy, C.W.
登録日2023-09-07
公開日2023-10-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Biocatalysis in Drug Design: Engineered Reductive Aminases (RedAms) Are Used to Access Chiral Building Blocks with Multiple Stereocenters.
J.Am.Chem.Soc., 145, 2023

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon