PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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8EK6	UCA Y35N (unbound) Fab from CH65-CH67 lineage 分子名称: UCA Fab heavy chain, UCA Fab light chain 著者 Maurer, D.P, Schmidt, A.G. 登録日 2022-09-20 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife, 12, 2023
8EKH	I-2 Y35N H35N (unbound) Fab from CH65-CH67 lineage 分子名称: I-2 Fab heavy chain, I-2 Fab light chain 著者 Maurer, D.P, Schmidt, A.G. 登録日 2022-09-21 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife, 12, 2023
1G21	MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN 分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ... 著者 Chiu, H.-J, Peters, J.W, Lanzilotta, W.N, Ryle, M.J, Seefeldt, L.C, Howard, J.B, Rees, D.C. 登録日 2000-10-16 公開日 2001-01-31 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein. Biochemistry, 40, 2001
7OEV	Hepatitis B core protein mutant F97L with bound GSLLGRMKGA 分子名称: Capsid protein, GSLLGRMKGA 著者 Makbul, C, Bottcher, B. 登録日 2021-05-04 公開日 2021-05-19 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
5O03	GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32 分子名称: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ... 著者 Koromyslova, A.D, Hansman, G.H. 登録日 2017-05-16 公開日 2017-10-04 最終更新日 2019-04-10 実験手法 X-RAY DIFFRACTION (2.194 Å) 主引用文献 Nanobodies targeting norovirus capsid reveal functional epitopes and potential mechanisms of neutralization. PLoS Pathog., 13, 2017
6XUK	AbLIFT design 15 of Ab 1116NS19.9 分子名称: GLYCEROL, Heavy chain, Light chain, ... 著者 Diskin, R, Borenstein-Katz, A. 登録日 2020-01-20 公開日 2021-02-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Biomolecular Recognition of the Glycan Neoantigen CA19-9 by Distinct Antibodies. J.Mol.Biol., 433, 2021
7OEN	Hepatitis B core protein mutant P5T with bound GSLLGRMKGA 分子名称: Capsid protein, GSLLGRMKGA 著者 Bottcher, B, Makbul, C. 登録日 2021-05-03 公開日 2021-05-19 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
3PC7	X-ray crystal structure of the DNA ligase III-alpha BRCT domain. 分子名称: DNA ligase 3 著者 Cuneo, M.J, Krahn, J.M, London, R.E. 登録日 2010-10-21 公開日 2011-06-15 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes. Nucleic Acids Res., 39, 2011
4WK4	Metal Ion and Ligand Binding of Integrin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALA-CYS-ARG-GLY-ASP-GLY-TRP-CYS, ... 著者 Xia, W, Springer, T.A. 登録日 2014-10-01 公開日 2014-12-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Metal ion and ligand binding of integrin alpha 5 beta 1. Proc.Natl.Acad.Sci.USA, 111, 2014
3PC6	X-ray crystal structure of the second XRCC1 BRCT domain. 分子名称: DNA repair protein XRCC1 著者 Cuneo, M.J, Krahn, J.M, London, R.E. 登録日 2010-10-21 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes. Nucleic Acids Res., 39, 2011
8OYF	Crystal structure of ASBTNM in lipidic cubic phase without substrate bound 分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, NICKEL (II) ION, PHOSPHATIDYLETHANOLAMINE, ... 著者 Becker, P, Cameron, A.D. 登録日 2023-05-04 公開日 2023-07-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of substrate binding and transport in BASS transporters. Biorxiv, 2023
8OYG	Crystal structure of ASBTNM in complex with pantoate 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CADMIUM ION, PANTOATE, ... 著者 Becker, P, Cameron, A.D. 登録日 2023-05-04 公開日 2023-07-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mechanism of substrate binding and transport in BASS transporters. Biorxiv, 2023
6Q4N	Fusidic acid bound AcrB_V340A 分子名称: (2S)-3-hydroxypropane-1,2-diyl didecanoate, DARPin, DECANE, ... 著者 Tam, H.K, Pos, K.M. 登録日 2018-12-06 公開日 2019-11-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Binding and Transport of Carboxylated Drugs by the Multidrug Transporter AcrB. J.Mol.Biol., 432, 2020
7RTP	Structure of full-length human lambda-6A light chain JTO in complex with urea stabilizer 20 [1-(2-(7-(diethylamino)-4-methyl-2-oxo-2H-chromen-3-yl)ethyl)-3-(pyridin-3-ylmethyl)urea] 分子名称: JTO light chain, N-{2-[7-(diethylamino)-4-methyl-2-oxo-2H-1-benzopyran-3-yl]ethyl}-N'-[(pyridin-3-yl)methyl]urea, PHOSPHATE ION 著者 Yan, N.L, Wilson, I.A, Kelly, J.W. 登録日 2021-08-13 公開日 2022-02-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Amyloidogenic immunoglobulin light chain kinetic stabilizers comprising a simple urea linker module reveal a novel binding sub-site. Bioorg.Med.Chem.Lett., 60, 2022
6Q8Y	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Heckel, E, Cheng, J, Buschauer, R, Kater, L, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2018-12-16 公開日 2019-03-13 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the 80S ribosome-Xrn1 nuclease complex. Nat.Struct.Mol.Biol., 26, 2019
4WJL	Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Inactive dipeptidyl peptidase 10, ... 著者 Bezerra, G.A, Dobrovetsky, E, Seitova, A, Fedosyuk, S, Dhe-Paganon, S, Gruber, K. 登録日 2014-09-30 公開日 2015-03-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels. Sci Rep, 5, 2015
4RP4	Crystal Structure of the L27 domain of Discs Large 1 (target ID NYSGRC-010766) from Drosophila melanogaster (space group P212121) 分子名称: Disks large 1 tumor suppressor protein, FORMIC ACID 著者 Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2014-10-29 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module. Biochemistry, 57, 2018
4WNR	Structure of methanosarcina barkeri Roco2 RocCORdC bound to GDP 分子名称: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich-repeat protein, ... 著者 Terheyden, S. 登録日 2014-10-14 公開日 2014-11-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Revisiting the Roco G-protein cycle. Biochem.J., 465, 2015
4RP9	Bacterial vitamin C transporter UlaA/SgaT in C2 form 分子名称: ASCORBIC ACID, Ascorbate-specific permease IIC component UlaA, PENTAETHYLENE GLYCOL, ... 著者 Wang, J.W. 登録日 2014-10-29 公開日 2015-03-04 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.651 Å) 主引用文献 Crystal structure of a phosphorylation-coupled vitamin C transporter. Nat.Struct.Mol.Biol., 22, 2015
7XFN	Structure of nucleosome-DI complex (-55I, Apo state) 分子名称: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
5O9H	Crystal structure of thermostabilised human C5a anaphylatoxin chemotactic receptor 1 (C5aR) in complex with NDT9513727 分子名称: 1-(1,3-benzodioxol-5-yl)-~{N}-(1,3-benzodioxol-5-ylmethyl)-~{N}-[(3-butyl-2,5-diphenyl-imidazol-4-yl)methyl]methanamine, C5a anaphylatoxin chemotactic receptor 1, CITRIC ACID, ... 著者 Robertson, N, Rappas, M, Dore, A.S, Brown, J, Bottegoni, G, Koglin, M, Cansfield, J, Jazayeri, A, Cooke, R.M, Marshall, F.H. 登録日 2017-06-19 公開日 2018-01-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of the complement C5a receptor bound to the extra-helical antagonist NDT9513727. Nature, 553, 2018
7XFL	Structure of nucleosome-AAG complex (A-53I, free state) 分子名称: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
6ZKZ	Crystal structure of InhA:01 TCR in complex with HLA-E (F116C) bound to InhA (53-61 H4C) 分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, Enoyl-[acyl-carrier-protein] reductase [NADH], ... 著者 Srikannathasan, V, Karuppiah, V, Robinson, R.A. 登録日 2020-06-30 公開日 2022-01-26 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition. Eur.J.Immunol., 52, 2022
7XFM	Structure of nucleosome-AAG complex (A-53I, post-catalytic state) 分子名称: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
7XFH	Structure of nucleosome-AAG complex (A-30I, post-catalytic state) 分子名称: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023

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