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7PVY
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Crystal structure of the c-Src SH3 domain E93V-S94A-R95S-T96G mutant
分子名称: Isoform 2 of Proto-oncogene tyrosine-protein kinase Src
著者Camara-Artigas, A, Salinas Garcia, M.C.
登録日2021-10-05
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The effect of the hinge loops composition in the domain swapping of the SH3 domain
To be published
6FL8
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BU of 6fl8 by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with purpurogallin and ADP
分子名称: 1,2-ETHANEDIOL, 2,3,4,6-tetrahydroxy-5H-benzo[7]annulen-5-one, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Whitfield, H.L, Brearley, C.A, Hemmings, A.M.
登録日2018-01-25
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Fluorescent Probe Identifies Active Site Ligands of Inositol Pentakisphosphate 2-Kinase.
J. Med. Chem., 61, 2018
7KWB
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BU of 7kwb by Molmil
Surface glycan-binding protein B from Bacteroides thetaiotaomicron
分子名称: BtSGBP-B
著者Tamura, K, Brumer, H, Van Petegem, F.
登録日2020-11-30
公開日2021-02-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota.
J.Biol.Chem., 296, 2021
6PNB
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BU of 6pnb by Molmil
Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 7-(4-(Aminomethyl)phenyl)-4-methylquinolin-2-amine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[4-(aminomethyl)phenyl]-4-methylquinolin-2-amine, GLYCEROL, ...
著者Li, H, Poulos, T.L.
登録日2019-07-02
公開日2020-04-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate.
J.Med.Chem., 63, 2020
7ZND
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Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the M state at pH 7.6 in the absence of sodium at 100K
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.985 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
5UG7
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BU of 5ug7 by Molmil
Calcium bound Perforin C2 Domain - T431D
分子名称: CALCIUM ION, Perforin-1
著者Law, R.H.P, Conroy, P.J, Voskoboinik, I, Whisstock, J.C.
登録日2017-01-07
公開日2018-02-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Perforin proteostasis is regulated through its C2 domain: supra-physiological cell death mediated by T431D-perforin.
Cell Death Differ., 25, 2018
7ZQ2
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BU of 7zq2 by Molmil
Crystal structure of Pizza6-RSH-TSH with Silicotungstic Acid (STA) polyoxometalate
分子名称: Keggin (STA), Pizza6-RSH-TSH
著者Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
登録日2022-04-29
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mutational study of a symmetry matched protein-polyoxometalate interface
To be published
7KV7
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BU of 7kv7 by Molmil
Surface glycan-binding protein B from Bacteroides fluxus in complex with laminaritriose
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, LYSINE, ...
著者Tamura, K, Brumer, H, Van Petegem, F.
登録日2020-11-26
公開日2021-02-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota.
J.Biol.Chem., 296, 2021
5UGI
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BU of 5ugi by Molmil
Crystal Structure of Ketosteroid Isomerase D38GF54A mutant from Pseudomonas Testosteroni (tKSI) bound to Equilenin
分子名称: EQUILENIN, Steroid Delta-isomerase
著者Yabukarski, F, Lamba, V, Herschlag, D.
登録日2017-01-08
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An Activator-Blocker Pair Provides a Controllable On-Off Switch for a Ketosteroid Isomerase Active Site Mutant.
J. Am. Chem. Soc., 139, 2017
6YJC
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BU of 6yjc by Molmil
Crystal structure of p38alpha in complex with SR154
分子名称: 1,2-ETHANEDIOL, 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-oxidanylidene-1-piperazin-1-yl-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14
著者Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-02
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.74100935 Å)
主引用文献Selective targeting of the alpha C and DFG-out pocket in p38 MAPK.
Eur.J.Med.Chem., 208, 2020
6PNO
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BU of 6pno by Molmil
Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-isopropylsulfamoyl)phenyl)acetamide
分子名称: 2-chloro-N-{4-chloro-3-[(propan-2-yl)sulfamoyl]phenyl}acetamide, Glutathione S-transferase omega-1, L(+)-TARTARIC ACID, ...
著者Oakley, A.J.
登録日2019-07-02
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Development of Benzenesulfonamide Derivatives as Potent Glutathione Transferase Omega-1 Inhibitors.
J.Med.Chem., 63, 2020
6F3Z
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BU of 6f3z by Molmil
Complex of E. coli LolA and periplasmic domain of LolC
分子名称: Lipoprotein-releasing system transmembrane protein LolC, Outer-membrane lipoprotein carrier protein
著者Kaplan, E.
登録日2017-11-29
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into bacterial lipoprotein trafficking from a structure of LolA bound to the LolC periplasmic domain.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7ZN8
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BU of 7zn8 by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.0 in the presence of sodium at 100K
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
5UGR
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BU of 5ugr by Molmil
Malyl-CoA lyase from Methylobacterium extorquens
分子名称: CHLORIDE ION, MAGNESIUM ION, Malyl-CoA lyase/beta-methylmalyl-CoA lyase, ...
著者Gonzalez, J.M.
登録日2017-01-09
公開日2017-02-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structure of Methylobacterium extorquens malyl-CoA lyase: CoA-substrate binding correlates with domain shift.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6J0O
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BU of 6j0o by Molmil
Crystal structure of CERT START domain in complex with compound SC1
分子名称: 2-[4-[2-fluoranyl-5-[3-(6-methylpyridin-2-yl)-1~{H}-pyrazol-4-yl]phenyl]phenyl]sulfonylethanol, LIPID-TRANSFER PROTEIN CERT, UNKNOWN ATOM OR ION
著者Suzuki, M, Nakao, N, Ueno, M, Sakai, S, Egawa, D, Hanzawa, H, Kawasaki, S, Kumagai, K, Kobayashi, S, Hanada, K.
登録日2018-12-25
公開日2019-02-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Natural ligand-nonmimetic inhibitors of the lipid-transfer protein CERT
Commun Chem, 2019
7L07
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BU of 7l07 by Molmil
Last common ancestor of HMPPK and PLK/HMPPK vitamin kinases
分子名称: ALUMINUM FLUORIDE, Ancestral Protein AncC
著者Gonzalez-Ordenes, F, Maturana, P, Herrera-Morande, A, Araya, G, Arizabalos, S, Castro-Fernandez, V.
登録日2020-12-11
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and molecular dynamics simulations of a promiscuous ancestor reveal residues and an epistatic interaction involved in substrate binding and catalysis in the ATP-dependent vitamin kinase family members.
Protein Sci., 30, 2021
6B85
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BU of 6b85 by Molmil
Crystal structure of transmembrane protein TMHC4_R
分子名称: TMHC4_R
著者Lu, P, DiMaio, F, Min, D, Bowie, J, Wei, K.Y, Baker, D.
登録日2017-10-05
公開日2018-03-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.889 Å)
主引用文献Accurate computational design of multipass transmembrane proteins.
Science, 359, 2018
7ZQG
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BU of 7zqg by Molmil
Crystal structure of Pizza6-KSH-TSH with Silicotungstic Acid (STA) polyoxometalate
分子名称: Keggin (STA), Pizza6-KSH-TSH
著者Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
登録日2022-04-29
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mutational study of a symmetry matched protein-polyoxometalate interface
To be published
7PQI
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BU of 7pqi by Molmil
Acinetobacter baumannii DNA gyrase B 23kDa ATPase subdomain complexed with novobiocin
分子名称: 1,2-ETHANEDIOL, DNA gyrase subunit B, NOVOBIOCIN
著者Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
登録日2021-09-17
公開日2022-09-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
6YHM
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BU of 6yhm by Molmil
Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis
分子名称: Cytotoxic necrotizing factor, MAGNESIUM ION
著者Lukat, P, Gazdag, E.M, Heidler, T.V, Blankenfeldt, W.
登録日2020-03-30
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Crystal structure of bacterial cytotoxic necrotizing factor CNF Y reveals molecular building blocks for intoxication.
Embo J., 40, 2021
6PMV
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BU of 6pmv by Molmil
Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(4-(2-Aminoethyl)phenyl)-4-methylquinolin-2-amine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[4-(2-aminoethyl)phenyl]-4-methylquinolin-2-amine, ACETATE ION, ...
著者Li, H, Poulos, T.L.
登録日2019-07-02
公開日2020-04-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate.
J.Med.Chem., 63, 2020
7ZNC
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BU of 7znc by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.6 in the absence of sodium at 100K
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7KV5
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BU of 7kv5 by Molmil
Surface glycan-binding protein B from Bacteroides fluxus
分子名称: DI(HYDROXYETHYL)ETHER, GUANIDINE, PKD domain protein
著者Tamura, K, Brumer, H, Van Petegem, F.
登録日2020-11-26
公開日2021-02-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota.
J.Biol.Chem., 296, 2021
6J0X
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BU of 6j0x by Molmil
Crystal Structure of Yeast Rtt107 and Mms22
分子名称: Peptide from E3 ubiquitin-protein ligase substrate receptor MMS22, Regulator of Ty1 transposition protein 107
著者Wan, B, Wu, J, Lei, M.
登録日2018-12-27
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Molecular Basis for Control of Diverse Genome Stability Factors by the Multi-BRCT Scaffold Rtt107.
Mol.Cell, 75, 2019
5FIY
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BU of 5fiy by Molmil
crystal structure of coiled coil domain of PAWR
分子名称: POTASSIUM ION, PRKC APOPTOSIS WT1 REGULATOR PROTEIN
著者Tiruttani Subhramanyam, U.K, Kubicek, J, Eidhoff, U.B, Labahn, J.
登録日2015-10-03
公開日2016-11-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the regulatory interactions of proapoptotic Par-4.
Cell Death Differ., 24, 2017

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件を2024-08-28に公開中

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