PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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1FVP	FLAVOPROTEIN 390 分子名称: 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE, FLAVOPROTEIN 390 著者 Kita, A, Miki, K. 登録日 1995-07-07 公開日 1995-10-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution. Acta Crystallogr.,Sect.D, 52, 1996
8DTA	Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide. 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ... 著者 Rosenbaum, J.C, Carlson, A.E. 登録日 2022-07-25 公開日 2023-07-05 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Glutathione modulates metal binding to proteins. TBD
4QV2	Unliganded crystal structure of Feline Norovirus P Domain co-crystallized with HBGA A-trisaccharide 分子名称: 1,2-ETHANEDIOL, VP1 著者 Singh, B.K, Hansman, G.S. 登録日 2014-07-14 公開日 2014-11-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural analysis of a feline norovirus protruding domain. Virology, 474, 2015
7TPB	p120RasGAP SH3 domain in complex with DLC1 RhoGAP domain 分子名称: Ras GTPase-activating protein 1, Rho GTPase-activating protein 7 著者 Stiegler, A.L, Boggon, T.J, Chau, J.E, Vish, K.J. 登録日 2022-01-25 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 SH3 domain regulation of RhoGAP activity: Crosstalk between p120RasGAP and DLC1 RhoGAP. Nat Commun, 13, 2022
4RE1	Crystal structure of human TEAD1 and disulfide-engineered YAP 分子名称: CHLORIDE ION, Transcriptional enhancer factor TEF-1, Yorkie homolog 著者 Xu, Z, Zhou, Z. 登録日 2014-09-21 公開日 2014-11-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Targeting Hippo pathway by specific interruption of YAP-TEAD interaction using cyclic YAP-like peptides. Faseb J., 29, 2015
4WF2	Structure of E. coli BirA G142A bound to biotinol-5'-AMP 分子名称: ((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHYL 5-((3AS,4S,6AR)-2-OXO-HEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL)PENTYL HYDROGEN PHOSPHATE, Bifunctional ligase/repressor BirA 著者 Eginton, C, Beckett, D, Wade, H. 登録日 2014-09-11 公開日 2014-10-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Allosteric Coupling via Distant Disorder-to-Order Transitions. J.Mol.Biol., 427, 2015
4WFD	Structure of the Rrp6-Rrp47-Mtr4 interaction 分子名称: ATP-dependent RNA helicase DOB1, Exosome complex exonuclease RRP6, Exosome complex protein LRP1, ... 著者 Schuch, B, Conti, E. 登録日 2014-09-14 公開日 2014-10-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase. Embo J., 33, 2014
7OCO	Hepatitis B core protein -low secretion phenotype L60V 分子名称: Capsid protein 著者 Bottcher, B, Makbul, C. 登録日 2021-04-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
7OD8	Hepatitis B core Protein mutant L60V + GSLLGRMKGA 分子名称: Capsid protein, peptide GSLLGRMKGA 著者 Bottcher, B, Makbul, C. 登録日 2021-04-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
7XSE	RNA polymerase II elongation complex transcribing a nucleosome (EC42) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-13 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7XSX	RNA polymerase II elongation complex transcribing a nucleosome (EC49) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-15 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7OCW	Hepatitis B core protein -low secretion phenotype P5T 分子名称: Capsid protein 著者 Bottcher, B, Makbul, C. 登録日 2021-04-28 公開日 2021-05-26 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
5NWY	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Su, T, Cheng, J, Sohmen, D, Hedman, R, Berninghausen, O, von Heijne, G, Wilson, D.N, Beckmann, R. 登録日 2017-05-08 公開日 2017-07-19 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling. Elife, 6, 2017
7XTD	RNA polymerase II elongation complex transcribing a nucleosome (EC58oct) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-16 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7OD6	Hepatitis B core protein + GSLLGRMKGA 分子名称: Capsid protein, Inhibitory Peptide P2 (GSLLGRMKGA) 著者 Bottcher, B, Makbul, C. 登録日 2021-04-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
7OD7	Hepatitis B core protein + SLLGRM 分子名称: Capsid protein, SLLRGM 著者 Bottcher, B, Makbul, C. 登録日 2021-04-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype. Microorganisms, 9, 2021
6Q1V	Human DNA Ligase 1 (E592R) Bound to an Adenylated, hydroxyl terminated DNA nick 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ADENOSINE MONOPHOSPHATE, ... 著者 Schellenberg, M.J, Williams, R.S, Tumbale, P.S, Riccio, A.A. 登録日 2019-08-06 公開日 2019-12-11 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Two-tiered enforcement of high-fidelity DNA ligation. Nat Commun, 10, 2019
6Q2C	Domain-swapped dimer of Acanthamoeba castellanii CYP51 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Obtusifoliol 14alphademethylase, ... 著者 Sharma, V, Podust, L.M. 登録日 2019-08-07 公開日 2020-10-21 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Domain-Swap Dimerization of Acanthamoeba castellanii CYP51 and a Unique Mechanism of Inactivation by Isavuconazole. Mol.Pharmacol., 98, 2020
7XSZ	RNA polymerase II elongation complex transcribing a nucleosome (EC115) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-15 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
4WFC	Structure of the Rrp6-Rrp47 interaction 分子名称: Exosome complex exonuclease RRP6, Exosome complex protein LRP1, SULFATE ION 著者 Schuch, B, Conti, E. 登録日 2014-09-14 公開日 2014-10-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase. Embo J., 33, 2014
4WFQ	Crystal structure of TFIIH subunit 分子名称: GLYCEROL, SULFATE ION, Suppressor of stem-loop protein 1 著者 Cho, Y, Kim, J.S, Lim, H.S. 登録日 2014-09-17 公開日 2015-02-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44 J.Biol.Chem., 290, 2015
7P1K	Cryo EM structure of bison NHA2 in nano disc structure 分子名称: CHOLESTEROL HEMISUCCINATE, Phosphatidylinositol, mitochondrial sodium/hydrogen exchanger 9B2 著者 Matsuoka, R, Fudim, R, Jung, S, Drew, D. 登録日 2021-07-01 公開日 2022-01-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.64 Å) 主引用文献 Structure, mechanism and lipid-mediated remodeling of the mammalian Na + /H + exchanger NHA2. Nat.Struct.Mol.Biol., 29, 2022
7UY8	Tetrahymena Polymerase alpha-Primase 分子名称: DNA polymerase, DNA polymerase alpha subunit B, DNA primase, ... 著者 He, Y, Song, H, Chan, H, Wang, Y, Liu, B, Susac, L, Zhou, Z.H, Feigon, J. 登録日 2022-05-06 公開日 2022-07-13 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase. Nature, 608, 2022
4WK2	Metal Ion and Ligand Binding of Integrin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Xia, W, Springer, T.A. 登録日 2014-10-01 公開日 2014-12-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Metal ion and ligand binding of integrin alpha 5 beta 1. Proc.Natl.Acad.Sci.USA, 111, 2014
5O05	GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-42 分子名称: 1,2-ETHANEDIOL, Capsid protein, Nanobody (VHH) Nano-42 著者 Koromyslova, A.D, Hansman, G.S. 登録日 2017-05-16 公開日 2017-10-04 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Nanobodies targeting norovirus capsid reveal functional epitopes and potential mechanisms of neutralization. PLoS Pathog., 13, 2017

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