PDB: 19952 件ウェブページステータス検索Chemie searchBIRD

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3FR0	Human glucokinase in complex with 2-amino benzamide activator 分子名称: 2-amino-N-(4-methyl-1,3-thiazol-2-yl)-5-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]benzamide, Glucokinase, SODIUM ION, ... 著者 Kamata, K. 登録日 2009-01-08 公開日 2009-02-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Identification of novel and potent 2-amino benzamide derivatives as allosteric glucokinase activators Bioorg.Med.Chem.Lett., 19, 2009
3FUU	T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in complex with Adenosine in space group P212121 分子名称: ADENOSINE, Dimethyladenosine transferase 著者 Demirci, H, Belardinelli, R, Seri, E, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G. 登録日 2009-01-14 公開日 2009-03-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Structural rearrangements in the active site of the Thermus thermophilus 16S rRNA methyltransferase KsgA in a binary complex with 5'-methylthioadenosine. J.Mol.Biol., 388, 2009
3FV9	Crystal structure of putative mandelate racemase/muconatelactonizing enzyme from ROSEOVARIUS NUBINHIBENS ISM complexed with magnesium 分子名称: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme 著者 Malashkevich, V.N, Rutter, M, Bain, K.T, Lau, C, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-01-15 公開日 2009-01-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of putative mandelate racemase/muconatelactonizing enzyme from ROSEOVARIUS NUBINHIBENS ISM complexed with magnesium to be published
3FXQ	Crystal structure of the LysR-type transcriptional regulator TsaR 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, FORMIC ACID, ... 著者 Monferrer, D, Tralau, T, Kertesz, M.A, Kikhney, A, Svergun, D, Uson, I. 登録日 2009-01-21 公開日 2010-01-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold Mol.Microbiol., 75, 2010
3FYI	Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides in the reduced state bound with cyanide 分子名称: CADMIUM ION, CALCIUM ION, COPPER (I) ION, ... 著者 Qin, L, Mills, D.A, Proshlyakov, D.A, Hiser, C, Ferguson-Miller, S. 登録日 2009-01-22 公開日 2009-06-16 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Redox dependent conformational changes in cytochrome c oxidase suggest a gating mechanism for proton uptake. Biochemistry, 48, 2009
3FTG	Crystal Structure of H2Db in complex with NP366-N3A variant peptide from influenza 分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ... 著者 Gras, S, Guillonneau, C, Rossjohn, J. 登録日 2009-01-12 公開日 2009-12-29 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Protective efficacy of cross-reactive CD8+ T cells recognising mutant viral epitopes depends on peptide-MHC-I structural interactions and T cell activation threshold. Plos Pathog., 6, 2010
3FQG	Crystal Structure of the S. pombe Rai1 分子名称: MAGNESIUM ION, Protein din1 著者 Xiang, S, Tong, L. 登録日 2009-01-07 公開日 2009-02-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature, 458, 2009
3FQV	Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine 分子名称: 5-[(3S)-3-(2-methoxybiphenyl-4-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Trimethoprim-sensitive dihydrofolate reductase 著者 Anderson, A.C, Frey, K.M, Liu, J, Lombardo, M.N. 登録日 2009-01-07 公開日 2009-03-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of wild-type and mutant methicillin-resistant Staphylococcus aureus dihydrofolate reductase reveal an alternate conformation of NADPH that may be linked to trimethoprim resistance. J.Mol.Biol., 387, 2009
3FSR	Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-295 of T. brockii ADH by C. beijerinckii ADH 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NADP-dependent alcohol dehydrogenase, ... 著者 Frolow, F, Greenblatt, H, Goihberg, E, Burstein, Y. 登録日 2009-01-11 公開日 2010-01-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms Biochemistry, 49, 2010
3FUX	T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in complex with 5'-methylthioadenosine in space group P212121 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Dimethyladenosine transferase 著者 Demirci, H, Belardinelli, R, Seri, E, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G. 登録日 2009-01-14 公開日 2009-03-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural rearrangements in the active site of the Thermus thermophilus 16S rRNA methyltransferase KsgA in a binary complex with 5'-methylthioadenosine. J.Mol.Biol., 388, 2009
3FW7	Structure of berberine bridge enzyme, H104A variant 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ... 著者 Winkler, A, Macheroux, P, Gruber, K. 登録日 2009-01-17 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.825 Å) 主引用文献 Structural roles of biocovalent flaninylation in berberine bridge enzyme to be published
3FXH	Crystal structure from the mobile metagenome of Halifax Harbour Sewage Outfall: Integron Cassette Protein HFX_CASS2 分子名称: Integron gene cassette protein HFX_CASS2 著者 Sureshan, V, Deshpande, C, Harrop, S.J, Kudritska, M, Koenig, J.E, Evdokimova, E, Chang, C, Edwards, A.M, Savchenko, A, Joachimiak, A, Doolittle, W.F, Stokes, H.W, Curmi, P.M.G, Mabbutt, B.C, Midwest Center for Structural Genomics (MCSG) 登録日 2009-01-20 公開日 2009-02-17 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.837 Å) 主引用文献 Integron gene cassettes: a repository of novel protein folds with distinct interaction sites. Plos One, 8, 2013
3FWA	Structure of berberine bridge enzyme, C166A variant in complex with (S)-reticuline 分子名称: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Winkler, A, Macheroux, P, Gruber, K. 登録日 2009-01-17 公開日 2009-05-19 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.496 Å) 主引用文献 Structural roles of biocovalent flaninylation in berberine bridge enzyme to be published
3FXR	Crystal structure of TsaR in complex with sulfate 分子名称: ASCORBIC ACID, GLYCEROL, LysR type regulator of tsaMBCD, ... 著者 Monferrer, D, Tralau, T, Kertesz, M.A, Kikhney, A, Svergun, D, Uson, I. 登録日 2009-01-21 公開日 2010-01-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold Mol.Microbiol., 75, 2010
3FS1	Crystal structure of HNF4a LBD in complex with the ligand and the coactivator PGC-1a fragment 分子名称: Hepatocyte nuclear factor 4-alpha, MYRISTIC ACID, PPARgamma Coactivator-1a (PGC-1a) 著者 Rha, G, Wu, G, Chi, Y. 登録日 2009-01-08 公開日 2009-10-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Multiple binding modes between HNF4alpha and the LXXLL motifs of PGC-1alpha lead to full activation J.Biol.Chem., 284, 2009
3FWV	Crystal Structure of a Redesigned TPR Protein, T-MOD(VMY), in Complex with MEEVF Peptide 分子名称: Heat shock protein HSP 90-beta, Hsc70/Hsp90-organizing protein, NICKEL (II) ION 著者 Jackrel, M.E, Valverde, R, Regan, L. 登録日 2009-01-19 公開日 2009-04-21 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Redesign of a protein-peptide interaction: characterization and applications Protein Sci., 18, 2009
3FTR	Structure of an amyloid forming peptide SSTNVG from IAPP (alternate polymorph) 分子名称: SSTNVG FROM ISLET AMYLOID POLYPEPTIDE 著者 Landau, M, Eisenberg, D. 登録日 2009-01-13 公開日 2009-06-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Molecular mechanisms for protein-encoded inheritance. Nat.Struct.Mol.Biol., 16, 2009
3FY2	Human EphA3 Kinase and Juxtamembrane Region Bound to Substrate KQWDNYEFIW 分子名称: Ephrin type-A receptor 3, peptide substrate 著者 Davis, T, Walker, J.R, Mackenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2009-01-21 公開日 2009-02-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural recognition of an optimized substrate for the ephrin family of receptor tyrosine kinases. Febs J., 276, 2009
3FQJ	Crystal Structure of the Mouse Dom3Z in Complex with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein Dom3Z 著者 Xiang, S, Tong, L. 登録日 2009-01-07 公開日 2009-02-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.623 Å) 主引用文献 Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature, 458, 2009
3FUB	Crystal structure of GDNF-GFRalpha1 complex 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Parkash, V, Goldman, A. 登録日 2009-01-14 公開日 2009-06-02 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Comparison of GFL-GFRalpha complexes: further evidence relating GFL bend angle to RET signalling Acta Crystallogr.,Sect.F, 65, 2009
3GGS	Human purine nucleoside phosphorylase double mutant E201Q,N243D complexed with 2-fluoro-2'-deoxyadenosine 分子名称: 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL, Purine nucleoside phosphorylase, SULFATE ION 著者 Sawaya, M.R, Afshar, S. 登録日 2009-03-02 公開日 2009-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structure of a mutant human purine nucleoside phosphorylase with the prodrug, 2-fluoro-2'-deoxyadenosine and the cytotoxic drug, 2-fluoroadenine. Protein Sci., 18, 2009
3FYP	Crystal structure of the quadruple mutant (N23C/C246S/D247E/P249A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis 分子名称: 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase, CHLORIDE ION, GLYCEROL, ... 著者 Jameson, G.B, Parker, E.J, Cochrane, F.P, Patchett, M.L. 登録日 2009-01-22 公開日 2009-03-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Reversing evolution: re-establishing obligate metal ion dependence in a metal-independent KDO8P synthase J.Mol.Biol., 390, 2009
3GIB	Crystal Structure of the Complex of the E. coli Hfq with Poly(A) 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', Protein hfq 著者 Link, T.M, Valentin-Hansen, P, Brennan, R.G. 登録日 2009-03-05 公開日 2009-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of Escherichia coli Hfq bound to polyriboadenylate RNA Proc.Natl.Acad.Sci.USA, 106, 2009
3G30	CTX-M-9 class A beta-lactamase complexed with compound 3 (G30) 分子名称: (1S,2R)-2-[(2,5-difluorophenyl)carbamoyl]cyclopropanecarboxylic acid, Beta-lactamase CTX-M-9a 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G3Y	Mth0212 in complex with ssDNA in space group P32 分子名称: 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', Exodeoxyribonuclease, GLYCEROL, ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-02-03 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010

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