PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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1MLY	Crystal Structure of 7,8-Diaminopelargonic Acid Synthase in complex with the cis isomer of amiclenomycin 分子名称: 7,8-diamino-pelargonic acid aminotransferase, CIS-AMICLENOMYCIN, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Sandmark, J, Mann, S, Marquet, A, Schneider, G. 登録日 2002-09-02 公開日 2002-12-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural basis for the inhibition of the biosynthesis of biotin by the antibiotic amiclenomycin J.Biol.Chem., 277, 2002
4O5C	Structure of human DNA polymerase complexed with N7-MG as the template base in a 1-nucleotide gapped DNA 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.363 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
8Y6U	Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Lin, W, Shi, J. 登録日 2024-02-03 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.97 Å) 主引用文献 NMR analysis of a loop-bulge structure of UUCGA pentaloop. Biochem.Biophys.Res.Commun., 691, 2024
7LGU	Structure of human prestin in the presence of NaCl 分子名称: CHLORIDE ION, CHOLESTEROL, DECANE, ... 著者 Ge, J, Gouaux, E. 登録日 2021-01-21 公開日 2021-08-25 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Molecular mechanism of prestin electromotive signal amplification. Cell, 184, 2021
6YW4	HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with N-oxalylglycine (NOG) and a RaPID-derived silent allosteric cyclic peptide 3C (14-mer) 分子名称: Egl nine homolog 1, MANGANESE (II) ION, N-OXALYLGLYCINE, ... 著者 Chowdhury, R, Schofield, C.J. 登録日 2020-04-29 公開日 2020-12-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.528 Å) 主引用文献 Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020
7LGW	Structure of human Prestin in nanodisc in the presence of NaCl 分子名称: CHLORIDE ION, CHOLESTEROL, DECANE, ... 著者 Ge, J, Gouaux, E. 登録日 2021-01-21 公開日 2021-08-25 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Molecular mechanism of prestin electromotive signal amplification. Cell, 184, 2021
7LH2	Structure of human prestin in the presence of sodium salicylate and sodium sulfate 分子名称: 2-HYDROXYBENZOIC ACID, CHOLESTEROL, Prestin 著者 Ge, J, Gouaux, E. 登録日 2021-01-21 公開日 2021-08-25 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.43 Å) 主引用文献 Molecular mechanism of prestin electromotive signal amplification. Cell, 184, 2021
7LH3	Structure of human prestin in the presence of sodium sulfate 分子名称: Prestin 著者 Ge, J, Gouaux, E. 登録日 2021-01-21 公開日 2021-08-25 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Molecular mechanism of prestin electromotive signal amplification. Cell, 184, 2021
6ZCN	Crystal structure of YTHDC1 with m6A 分子名称: N6-METHYLADENOSINE-5'-MONOPHOSPHATE, SULFATE ION, YTHDC1 著者 Bedi, R.K, Huang, D, Wiedmer, L, Caflisch, A. 登録日 2020-06-11 公開日 2020-07-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1. J Chem Theory Comput, 17, 2021
5VXO	Crystal Structure Analysis of human CLYBL in complex with propionyl-CoA 分子名称: 1,2-ETHANEDIOL, Citrate lyase subunit beta-like protein, mitochondrial, ... 著者 Shen, H. 登録日 2017-05-23 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.266 Å) 主引用文献 The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12. Cell, 171, 2017
3HBL	Crystal Structure of S. aureus Pyruvate Carboxylase T908A Mutant 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... 著者 Tong, L, Yu, L.P.C. 登録日 2009-05-04 公開日 2009-06-30 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 A Symmetrical Tetramer for S. aureus Pyruvate Carboxylase in Complex with Coenzyme A. Structure, 17, 2009
8XC1	C. elegans SID1 in complex with dsRNA 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Gong, D.S. 登録日 2023-12-07 公開日 2024-06-05 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (2.21 Å) 主引用文献 Structural basis for double-stranded RNA recognition by SID1. Nucleic Acids Res., 52, 2024
8Y6C	Norovirus GII.10 P domain and 2'-FL (powder) 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'FL (powder), ... 著者 Hansman, G, Tame, J.R.H, Kher, G, Pancera, M. 登録日 2024-02-02 公開日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Norovirus GII.10 P domain and 2'-FL (powder) To Be Published
8YZ6	SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain of JH-8B, ... 著者 Chen, X, Wu, Y.-M. 登録日 2024-04-06 公開日 2024-06-05 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (4.55 Å) 主引用文献 The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine. Plos Pathog., 20, 2024
5VEO	Murine ectonucleotide pyrophosphatase / phosphodiesterase 5 (ENPP5, NPP5), inactive (T72A), in complex with AMP 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ... 著者 Gorelik, A, Randriamihaja, A, Illes, K, Nagar, B. 登録日 2017-04-05 公開日 2017-09-20 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 A key tyrosine substitution restricts nucleotide hydrolysis by the ectoenzyme NPP5. FEBS J., 284, 2017
8X8G	Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105, in complex with oligosaccharide G2S2-oxazoline 分子名称: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE, CALCIUM ION, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose, ... 著者 Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J. 登録日 2023-11-27 公開日 2024-07-03 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism. Jacs Au, 4, 2024
8Y5V	GII.4 Sydney PD and 2'-FL 分子名称: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose 著者 Hansman, G, Tame, J.R.H, Kher, G, Pancera, M. 登録日 2024-02-01 公開日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 GII.4 Sydney PD and 2'-FL To Be Published
1MGV	Crystal Structure of the R391A Mutant of 7,8-Diaminopelargonic Acid Synthase 分子名称: 7,8-diamino-pelargonic acid aminotransferase, ISOPROPYL ALCOHOL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Eliot, A.C, Sandmark, J, Schneider, G, Kirsch, J.F. 登録日 2002-08-16 公開日 2002-11-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Dual-Specific Active Site of 7,8-Diaminopelargonic Acid Synthase and the Effect of the R391A Mutation Biochemistry, 41, 2002
8XS3	Structure of MPXV B6 and D68 fab complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D68_heavy chain, ... 著者 wu, L.L, Sun, J.Q. 登録日 2024-01-08 公開日 2024-06-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Two noncompeting human neutralizing antibodies targeting MPXV B6 show protective effects against orthopoxvirus infections. Nat Commun, 15, 2024
8YVV	The Crystal Structure of BTK from Biortus 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Wang, F, Cheng, W, Yuan, Z, Lin, D, Pan, W. 登録日 2024-03-29 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 The Crystal Structure of BTK from Biortus. To Be Published
4O5E	Structure of human DNA polymerase complexed with N7MG in the template base paired with incoming non-hydrolyzable TTP 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.532 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
4O5K	Structure of human DNA polymerase complexed with N7MG in the template base paired with incoming non-hydrolyzable CTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.058 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
5VMM	Staphylococcus aureus IsdB bound to human hemoglobin 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated cell wall-anchored protein, ... 著者 Bowden, C.F, Chan, A.C, Murphy, M.E. 登録日 2017-04-27 公開日 2017-11-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structure-function analyses reveal key features in Staphylococcus aureus IsdB-associated unfolding of the heme-binding pocket of human hemoglobin. J. Biol. Chem., 293, 2018
6YX5	Structure of DrrA from Legionella pneumophilia in complex with human Rab8a 分子名称: MAGNESIUM ION, Multifunctional virulence effector protein DrrA, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Schneider, S, Du, J, von Wrisberg, M.K, Lang, K, Itzen, A. 登録日 2020-04-30 公開日 2020-12-23 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Rab1-AMPylation by Legionella DrrA is allosterically activated by Rab1. Nat Commun, 12, 2021
4V5G	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2009-09-01 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA. Science, 326, 2009

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