PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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4WI7	Structural mapping of the human IgG1 binding site for FcRn: hu3S193 Fc mutation H435A 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region 著者 Farrugia, W, Burvenich, I.J.G, Scott, A.M, Ramsland, P.A. 登録日 2014-09-25 公開日 2015-09-30 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional mapping of human IgG1 binding site for FcRn in vivo using human FcRn transgenic mice To Be Published
7NL5	Structure of the catalytic domain of the Bacillus circulans alpha-1,6 Mannanase in complex with an alpha-1,6-alpha-manno-cyclophellitol trisaccharide inhibitor 分子名称: (1R,2R,3R,4S,5R)-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol, (1R,6S)-5beta-(Hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2beta,3beta,4alpha-triol, Alpha-1,6-mannanase, ... 著者 Schroeder, S, Offen, W.A, Males, A, Jin, Y, De Boer, C, Enotarpi, J, Marino, L, van der Marel, G.A, Florea, B.I, Codee, J.D.C, Overkleeft, H.S, Davies, G.J. 登録日 2021-02-22 公開日 2021-04-28 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Development of Non-Hydrolysable Oligosaccharide Activity-Based Inactivators for Endoglycanases: A Case Study on alpha-1,6 Mannanases. Chemistry, 27, 2021
4WI8	Structural mapping of the human IgG1 binding site for FcRn: hu3S193 Fc mutation Y436A 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose, ... 著者 Farrugia, W, Burvenich, I.J.G, Scott, A.M, Ramsland, P.A. 登録日 2014-09-25 公開日 2015-09-30 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and functional mapping of human IgG1 binding site for FcRn in vivo using human FcRn transgenic mice To Be Published
7NWL	Cryo-EM structure of human integrin alpha5beta1 (open form) in complex with fibronectin and TS2/16 Fv-clasp 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin alpha-5, ... 著者 Schumacher, S, Dedden, D, Vazquez Nunez, R, Matoba, K, Takagi, J, Biertumpfel, C, Mizuno, N. 登録日 2021-03-17 公開日 2021-06-02 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into integrin alpha 5 beta 1 opening by fibronectin ligand. Sci Adv, 7, 2021
3JYR	Crystal structures of the GacH receptor of Streptomyces glaucescens GLA.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of Salmonella typhimurium. 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Maltose-binding periplasmic protein 著者 Vahedi-Faridi, A, Licht, A, Bulut, H, Schneider, E. 登録日 2009-09-22 公開日 2010-02-16 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structures of the Solute Receptor GacH of Streptomyces glaucescens in Complex with Acarbose and an Acarbose Homolog: Comparison with the Acarbose-Loaded Maltose-Binding Protein of Salmonella typhimurium. J.Mol.Biol., 397, 2010
4WBH	STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I APO - 2.2A 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Protein notum homolog, ... 著者 Zebisch, M, Jones, E.Y. 登録日 2014-09-03 公開日 2015-02-25 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Notum deacylates Wnt proteins to suppress signalling activity Nature, 519, 2015
4WDI	Weak TCR binding to an unstable insulin epitope drives type 1 diabetes 分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ... 著者 Rizkallah, P.J, Cole, D.K. 登録日 2014-09-08 公開日 2015-06-24 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.313 Å) 主引用文献 Distortion of the Major Histocompatibility Complex Class I Binding Groove to Accommodate an Insulin-derived 10-Mer Peptide. J.Biol.Chem., 290, 2015
4V6S	Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. 登録日 2011-12-09 公開日 2014-07-09 最終更新日 2025-03-19 実験手法 ELECTRON MICROSCOPY (13.1 Å) 主引用文献 Structural characterization of mRNA-tRNA translocation intermediates. Proc.Natl.Acad.Sci.USA, 109, 2012
4WCK	Crystal Structure of apo Cell Shape Determinant protein Csd4 from Helicobacter pylori 分子名称: 2,6-DIAMINOPIMELIC ACID, Conserved hypothetical secreted protein, IODIDE ION 著者 Chan, A.C, Murphy, M.E. 登録日 2014-09-05 公開日 2014-12-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Helical Shape of Helicobacter pylori Requires an Atypical Glutamine as a Zinc Ligand in the Carboxypeptidase Csd4. J.Biol.Chem., 290, 2015
3JQA	Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor 2-amino-1,9-dihydro-6H-purine-6-thione (DX4) 分子名称: 2-amino-1,9-dihydro-6H-purine-6-thione, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pteridine reductase 1 著者 Tulloch, L.B, Hunter, W.N. 登録日 2009-09-06 公開日 2009-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-based design of pteridine reductase inhibitors targeting african sleeping sickness and the leishmaniases. J.Med.Chem., 53, 2010
4WDR	Crystal structure of haloalkane dehalogenase LinB 140A+143L+177W+211L mutant (LinB86) from Sphingobium japonicum UT26 分子名称: CALCIUM ION, CHLORIDE ION, Haloalkane dehalogenase 著者 Degtjarik, O, Rezacova, P, Iermak, I, Chaloupkova, R, Damborsky, J, Kuta-Smatanova, I. 登録日 2014-09-09 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of haloalkane dehalogenase LinB mutant (L177W) from Sphingobium japonicum UT26 Acs Catalysis, 2016
4V79	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H. 登録日 2013-10-14 公開日 2014-07-09 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Energy barriers and driving forces in tRNA translocation through the ribosome. Nat.Struct.Mol.Biol., 20, 2013
4V82	Crystal structure of cyanobacterial Photosystem II in complex with terbutryn 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Gabdulkhakov, A, Broser, M, Guskov, A, Kern, J, Glockner, C, Muh, F, Saenger, W, Zouni, A. 登録日 2010-11-30 公開日 2014-07-09 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn J.Biol.Chem., 286, 2011
4UTV	Crystal structure of zebrafish Sirtuin 5 in complex with 3-phenyl- succinylated CPS1-peptide 分子名称: (2R)-2-phenylbutanedioic acid, (2S)-2-phenylbutanedioic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Pannek, M, Gertz, M, Steegborn, C. 登録日 2014-07-23 公開日 2014-08-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors. Angew.Chem.Int.Ed.Engl., 53, 2014
7N0A	Structure of Human Leukaemia Inhibitory Factor with Fab MSC1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Leukemia inhibitory factor, ... 著者 Raman, S, Bosch, A, Fransson, J, Julien, J.P. 登録日 2021-05-25 公開日 2022-06-15 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Therapeutic Targeting of LIF Overcomes Macrophage-mediated Immunosuppression of the Local Tumor Microenvironment. Clin.Cancer Res., 29, 2023
4UTZ	Crystal structure of zebrafish Sirtuin 5 in complex with adipoylated CPS1-peptide 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CARBAMOYLPHOSPHATE SYNTHETASE I, ... 著者 Pannek, M, Gertz, M, Steegborn, C. 登録日 2014-07-24 公開日 2014-08-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors. Angew.Chem.Int.Ed.Engl., 53, 2014
4V8N	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site. 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Voorhees, R.M, Mandal, D, Neubauer, C, Koehrer, C, RajBhandary, U.L, Ramakrishnan, V. 登録日 2013-02-13 公開日 2014-07-09 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The Structural Basis for Specific Decoding of Aua by Isoleucine tRNA on the Ribosome Nat.Struct.Mol.Biol., 20, 2013
4W1U	Crystal structure of Rv3557c/KstR2, a transcriptional repressor involved in cholesterol metabolism in Mycobacterium tuberculosis 分子名称: HTH-type transcriptional repressor KstR2 著者 Dawes, S.S, Kendall, S.K, Baker, E.N, Lott, J.S. 登録日 2014-08-13 公開日 2015-07-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.875 Å) 主引用文献 Crystal structure of Rv3557c/KstR2, a transcriptional repressor involved in cholesterol metabolism in Mycobacterium tuberculosis. To Be Published
4V2F	Tetracycline repressor TetR(D), unliganded 分子名称: TETRACYCLINE REPRESSOR PROTEIN CLASS D 著者 Werten, S, Orth, P, Saenger, W, Hinrichs, W. 登録日 2014-10-09 公開日 2014-12-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition. Biochemistry, 53, 2014
4V2X	High resolution structure of the full length tri-modular endo-beta-1, 4-glucanase B (Cel5B) from Bacillus halodurans 分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ... 著者 Venditto, I, Santos, H, Ferreira, L.M.A, Sakka, K, Fontes, C.M.G.A, Najmudin, S. 登録日 2014-10-15 公開日 2015-02-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Family 46 Carbohydrate-Binding Modules Contribute to the Enzymatic Hydrolysis of Xyloglucan and Beta-1,3-1,4-Glucans Through Distinct Mechanisms. J.Biol.Chem., 290, 2015
4W5L	Crystal structure of a prp peptide 分子名称: PrP peptide 著者 Yu, L, Lee, S.-J, Yee, V. 登録日 2014-08-18 公開日 2015-05-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4V2G	Tetracycline repressor TetR(D) bound to chlortetracycline and iso- chlortetracycline 分子名称: 7-CHLOROTETRACYCLINE, ISO-7-CHLORTETRACYCLINE, MAGNESIUM ION, ... 著者 Werten, S, Orth, P, Saenger, W, Hinrichs, W. 登録日 2014-10-09 公開日 2014-12-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition. Biochemistry, 53, 2014
4W5Z	High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ... 著者 Malecki, P.H, Vorgias, C.E, Rypniewski, W. 登録日 2014-08-19 公開日 2015-08-26 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina. To Be Published
4W66	Crystal structure of Glutathione S-transferase domain protein from Haliangium ochraceum DSM 14365 分子名称: GLUTATHIONE, Glutathione S-transferase domain protein 著者 Chang, C, Chhor, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2014-08-20 公開日 2014-09-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Crystal structure of Glutathione S-transferase domain protein from Haliangium ochraceum DSM 14365 To Be Published
4W8C	Crystal structure of the helical domain deleted form MsrA from Clostridium oremlandii 分子名称: GLYCINE, Peptide methionine sulfoxide reductase MsrA 著者 Lee, E.H, Hwang, K.Y, Kim, H.-Y. 登録日 2014-08-23 公開日 2015-07-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7568 Å) 主引用文献 Essential role of the C-terminal helical domain in active site formation of selenoprotein MsrA from Clostridium oremlandii Plos One, 10, 2015

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