Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GXY
DownloadVisualize
BU of 6gxy by Molmil
Tryparedoxin from Trypanosoma brucei in complex with CFT
分子名称: 5-(4-fluorophenyl)-2-methyl-3~{H}-thieno[2,3-d]pyrimidin-4-one, Tryparedoxin
著者Bader, N, Wagner, A, Hellmich, U, Schindelin, H.
登録日2018-06-27
公開日2019-01-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Inhibitor-Induced Dimerization of an Essential Oxidoreductase from African Trypanosomes.
Angew. Chem. Int. Ed. Engl., 58, 2019
6GY9
DownloadVisualize
BU of 6gy9 by Molmil
Fucose-functionalized precision glycomacromolecules targeting human norovirus capsid protein
分子名称: 1,2-ETHANEDIOL, 2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-alpha-L-galactopyranoside, Capsid protein
著者Ruoff, K, Kilic, T, Hansman, G.S.
登録日2018-06-28
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Fucose-Functionalized Precision Glycomacromolecules Targeting Human Norovirus Capsid Protein.
Biomacromolecules, 19, 2018
6D12
DownloadVisualize
BU of 6d12 by Molmil
Crystal structure of C-terminal xRRM domain of human Larp7 bound to 7SK stem-loop 4 RNA
分子名称: La-related protein 7, human 7SK RNA stem-loop 4
著者Eichhorn, C.D, Cascio, D, Sawaya, M.R, Feigon, J.
登録日2018-04-11
公開日2018-06-27
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Structural basis for recognition of human 7SK long noncoding RNA by the La-related protein Larp7.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CDH
DownloadVisualize
BU of 6cdh by Molmil
Crystal structure of ferrous form of the Cl-Tyr157 human cysteine dioxygenase with both uncrosslinked and crosslinked cofactor
分子名称: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ...
著者Liu, A, Li, J, Shin, I.
登録日2018-02-08
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.821 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat. Chem. Biol., 14, 2018
6CNP
DownloadVisualize
BU of 6cnp by Molmil
Crystal structure of MBD2 complex with methylated CpG island
分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*C)-3'), Methyl-CpG-binding domain protein 2, ...
著者Xu, C, Min, J, Structural Genomics Consortium (SGC)
登録日2018-03-08
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the ability of MBD domains to bind methyl-CG and TG sites in DNA.
J. Biol. Chem., 293, 2018
6GFJ
DownloadVisualize
BU of 6gfj by Molmil
Structure of RIP2 CARD domain fused to crystallisable MBP tag
分子名称: Sugar ABC transporter substrate-binding protein,Receptor-interacting serine/threonine-protein kinase 2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Pellegrini, E, Cusack, S.
登録日2018-04-30
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献RIP2 filament formation is required for NOD2 dependent NF-kappa B signalling.
Nat Commun, 9, 2018
6GHT
DownloadVisualize
BU of 6ght by Molmil
HtxB D206A protein variant from Pseudomonas stutzeri in complex with hypophosphite to 1.12 A resolution
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, FORMIC ACID, ...
著者Bisson, C, Robertson, A.J, Hitchcock, A, Adams, N.B.
登録日2018-05-09
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Phosphite binding by the HtxB periplasmic binding protein depends on the protonation state of the ligand.
Sci Rep, 9, 2019
6CJ8
DownloadVisualize
BU of 6cj8 by Molmil
CSP1
分子名称: Competence-stimulating peptide type 1
著者Yang, Y.
登録日2018-02-26
公開日2018-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of Competence-Stimulating Peptide Analogues Reveals Key Features for ComD1 and ComD2 Receptor Binding in Streptococcus pneumoniae.
Biochemistry, 57, 2018
6CVR
DownloadVisualize
BU of 6cvr by Molmil
Human Aprataxin (Aptx) S242N bound to RNA-DNA, AMP and Zn product complex
分子名称: ADENOSINE MONOPHOSPHATE, Aprataxin, DNA (5'-D(*GP*AP*AP*TP*CP*AP*TP*AP*AP*C)-3'), ...
著者Schellenberg, M.J, Tumbale, P.S, Williams, R.S.
登録日2018-03-28
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Mechanism of APTX nicked DNA sensing and pleiotropic inactivation in neurodegenerative disease.
EMBO J., 37, 2018
6CVQ
DownloadVisualize
BU of 6cvq by Molmil
Human Aprataxin (Aptx) H201Q bound to RNA-DNA, AMP and Zn product complex
分子名称: ADENOSINE MONOPHOSPHATE, Aprataxin, BETA-MERCAPTOETHANOL, ...
著者Schellenberg, M.J, Tumbale, P.S, Williams, R.S.
登録日2018-03-28
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanism of APTX nicked DNA sensing and pleiotropic inactivation in neurodegenerative disease.
EMBO J., 37, 2018
6C1I
DownloadVisualize
BU of 6c1i by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907
分子名称: 2-chloro-5-nitro-N-(pyridin-4-yl)benzamide, Peroxisome proliferator-activated receptor gamma, nonanoic acid
著者Shang, J, Fuhrmann, J, Brust, R, Kojetin, D.J.
登録日2018-01-04
公開日2018-12-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献A structural mechanism for directing corepressor-selective inverse agonism of PPAR gamma.
Nat Commun, 9, 2018
6BPS
DownloadVisualize
BU of 6bps by Molmil
Crystal structure of cysteine-bound ferrous form of the uncrosslinked F2-Tyr157 human cysteine dioxygenase
分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-11-26
公開日2018-07-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat. Chem. Biol., 14, 2018
6BPV
DownloadVisualize
BU of 6bpv by Molmil
Crystal structure of cysteine-bound ferrous form of the matured F2-Tyr157 human cysteine dioxygenase
分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-11-26
公開日2018-07-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat. Chem. Biol., 14, 2018
6BGF
DownloadVisualize
BU of 6bgf by Molmil
Crystal structure of cysteine-bound ferrous form of the crosslinked human cysteine dioxygenase
分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-10-28
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat.Chem.Biol., 14, 2018
6BZK
DownloadVisualize
BU of 6bzk by Molmil
Solution structure of KTI55
分子名称: M protein
著者Castellino, F.J, Qiu, C, Yuan, Y.
登録日2017-12-24
公開日2019-01-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Contributions of different modules of the plasminogen-binding Streptococcus pyogenes M-protein that mediate its functional dimerization.
J.Struct.Biol., 204, 2018
6CMQ
DownloadVisualize
BU of 6cmq by Molmil
Structure of human SHP2 without N-SH2 domain
分子名称: Tyrosine-protein phosphatase non-receptor type 11
著者Padua, R.A.P, Sun, Y, Marko, I, Pitsawong, W, Kern, D.
登録日2018-03-06
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2.
Nat Commun, 9, 2018
6COU
DownloadVisualize
BU of 6cou by Molmil
CSP2-E1Ad10
分子名称: Competence-stimulating peptide type 2
著者Yang, Y.
登録日2018-03-12
公開日2018-08-29
最終更新日2018-09-19
実験手法SOLUTION NMR
主引用文献Structural Characterization of Competence-Stimulating Peptide Analogues Reveals Key Features for ComD1 and ComD2 Receptor Binding in Streptococcus pneumoniae.
Biochemistry, 57, 2018
6FPQ
DownloadVisualize
BU of 6fpq by Molmil
Structure of S. pombe Mmi1 in complex with 7-mer RNA
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, RNA (5'-R(*UP*UP*AP*AP*AP*CP*C)-3'), YTH domain-containing protein mmi1
著者Stowell, J.A.W, Hill, C.H, Yu, M, Wagstaff, J.L, McLaughlin, S.H, Freund, S.M.V, Passmore, L.A.
登録日2018-02-11
公開日2018-05-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding.
J. Biol. Chem., 293, 2018
6BPT
DownloadVisualize
BU of 6bpt by Molmil
Crystal structure of ferrous form of the uncrosslinked F2-Tyr157 human cysteine dioxygenase
分子名称: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-11-26
公開日2018-07-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat. Chem. Biol., 14, 2018
6BYM
DownloadVisualize
BU of 6bym by Molmil
Crystal structure of the sterol-bound second StART domain of yeast Lam4
分子名称: 25-HYDROXYCHOLESTEROL, Sterol-binding protein
著者Jentsch, J.A, Kiburu, I.N, Wu, J, Pandey, K, Boudker, O, Menon, A.K.
登録日2017-12-20
公開日2018-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of sterol binding and transport by a yeast StARkin domain.
J. Biol. Chem., 293, 2018
6BPW
DownloadVisualize
BU of 6bpw by Molmil
Crystal structure of ferrous form of the Cl2-Tyr157 human cysteine dioxygenase with both uncrosslinked and crosslinked cofactor
分子名称: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-11-26
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat. Chem. Biol., 14, 2018
6GFY
DownloadVisualize
BU of 6gfy by Molmil
pVHL:EloB:EloC in complex with modified VH032 containing (3R,4S)-3-fluoro-4-hydroxyproline (ligand 14a)
分子名称: (2~{R},3~{R},4~{S})-1-[(2~{S})-2-acetamido-3,3-dimethyl-butanoyl]-3-fluoranyl-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Gadd, M.S, Testa, A, Ciulli, A.
登録日2018-05-02
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献3-Fluoro-4-hydroxyprolines: Synthesis, Conformational Analysis, and Stereoselective Recognition by the VHL E3 Ubiquitin Ligase for Targeted Protein Degradation.
J. Am. Chem. Soc., 140, 2018
6GOA
DownloadVisualize
BU of 6goa by Molmil
Structural basis for OXA-48 dimerization - R189A mutant
分子名称: Beta-lactamase, CHLORIDE ION
著者Lund, B.A, Thomassen, A.M, Leiros, H.K.S.
登録日2018-06-01
公開日2018-07-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The biological assembly of OXA-48 reveals a dimer interface with high charge complementarity and very high affinity.
FEBS J., 285, 2018
6GXV
DownloadVisualize
BU of 6gxv by Molmil
Amylase in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, A-amylase, CALCIUM ION, ...
著者Agirre, J, Moroz, O, Meier, S, Brask, J, Munch, A, Hoff, T, Andersen, C, Wilson, K.S, Davies, G.J.
登録日2018-06-27
公開日2019-01-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The structure of the AliC GH13 alpha-amylase from Alicyclobacillus sp. reveals the accommodation of starch branching points in the alpha-amylase family.
Acta Crystallogr D Struct Biol, 75, 2019
6GYA
DownloadVisualize
BU of 6gya by Molmil
Amylase in complex with branched ligand
分子名称: A-amylase, CALCIUM ION, SODIUM ION, ...
著者Agirre, J, Moroz, O, Meier, S, Brask, J, Munch, A, Hoff, T, Andersen, C, Wilson, K.S, Davies, G.J.
登録日2018-06-28
公開日2019-01-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The structure of the AliC GH13 alpha-amylase from Alicyclobacillus sp. reveals the accommodation of starch branching points in the alpha-amylase family.
Acta Crystallogr D Struct Biol, 75, 2019

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon