PDB: 2232 件ウェブページステータス検索Chemie searchBIRD

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3LD1	Crystal Structure of IBV Nsp2a 分子名称: Replicase polyprotein 1a 著者 Xu, Y, Cong, L, Wei, L, Fu, J, Chen, C, Yang, A, Tang, H, Bartlam, M, Rao, Z. 登録日 2010-01-12 公開日 2011-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.498 Å) 主引用文献 IBV nsp2 is an endosome-associated protein and viral pathogenicity factor To be Published
1ZUI	Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase 分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, PHOSPHATE ION, Shikimate kinase 著者 Cheng, W.C, Chang, Y.N, Wang, W.C. 登録日 2005-05-31 公開日 2006-05-31 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for shikimate-binding specificity of Helicobacter pylori shikimate kinase J.Bacteriol., 187, 2005
5Z27	Crystal structure of highly active BTUO mutant P287G without dehydration 分子名称: 1,2-ETHANEDIOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ... 著者 Hibi, T, Itoh, T, Nishiya, Y. 登録日 2017-12-29 公開日 2019-01-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Flexibility of a Distal Interface Loop Modulates Water Network in the Active Site of Bacillus sp. TB-90 Urate Oxidase to be published
5Z6E	Crystal structure of a beta gamma-crystallin domain of Abundant Perithecial Protein (APP) from Neurospora crassa in the Ca2+-bound form 分子名称: CALCIUM ION, DUF1881 domain-containing protein, POTASSIUM ION 著者 Srivastava, S.S, Sankaranarayanan, R. 登録日 2018-01-22 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.864 Å) 主引用文献 Interface interactions between beta gamma-crystallin domain and Ig-like domain render Ca2+-binding site inoperative in abundant perithecial protein of Neurospora crassa. Mol.Microbiol., 110, 2018
3J0A	Homology model of human Toll-like receptor 5 fitted into an electron microscopy single particle reconstruction 分子名称: Toll-like receptor 5, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Modis, Y, Zhou, K, Kanai, R, Lee, P, Wang, H.W. 登録日 2011-06-02 公開日 2011-12-28 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (26 Å) 主引用文献 Toll-like receptor 5 forms asymmetric dimers in the absence of flagellin. J.Struct.Biol., 177, 2012
5ZC6	Solution structure of H-RasT35S mutant protein in complex with KBFM123 分子名称: 3-oxidanyl-~{N}-[[(2~{R})-oxolan-2-yl]methyl]naphthalene-2-carboxamide, GTPase HRas, MAGNESIUM ION, ... 著者 Matsumoto, S, Hayashi, Y, Hiraga, T, Matsuo, K, Kataoka, T. 登録日 2018-02-15 公開日 2018-09-12 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Molecular Basis for Allosteric Inhibition of GTP-Bound H-Ras Protein by a Small-Molecule Compound Carrying a Naphthalene Ring Biochemistry, 57, 2018
6XG3	The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature 分子名称: CHLORIDE ION, Non-structural protein 3, PHOSPHATE ION, ... 著者 Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-06-16 公開日 2020-06-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors. Nat Commun, 12, 2021
2PET	Lutheran glycoprotein, N-terminal domains 1 and 2. 分子名称: Lutheran blood group glycoprotein 著者 Burton, N, Brady, R.L. 登録日 2007-04-03 公開日 2007-12-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Laminin 511/521-binding site on the Lutheran blood group glycoprotein is located at the flexible junction of Ig domains 2 and 3. Blood, 110, 2007
2PF6	Lutheran glycoprotein, N-terminal domains 1 and 2 分子名称: Lutheran blood group glycoprotein 著者 Burton, N, Brady, R.L. 登録日 2007-04-04 公開日 2007-12-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The Laminin 511/521-binding site on the Lutheran blood group glycoprotein is located at the flexible junction of Ig domains 2 and 3. Blood, 110, 2007
3I4W	Crystal Structure of the third PDZ domain of PSD-95 分子名称: ACETATE ION, Disks large homolog 4 著者 Camara-Artigas, A, Gavira, J.A. 登録日 2009-07-03 公開日 2010-04-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Novel conformational aspects of the third PDZ domain of the neuronal post-synaptic density-95 protein revealed from two 1.4A X-ray structures J.Struct.Biol., 170, 2010
1YRO	Crystal structure of beta14,-galactosyltransferase mutant ARG228Lys in complex with alpha-lactalbumin in the presence of UDP-galactose and Mn 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALPHA-LACTALBUMIN, BETA-1,4-GALACTOSYLTRANSFERASE, ... 著者 Ramakrishnan, B, Boeggeman, E, Qasba, P.K. 登録日 2005-02-04 公開日 2005-03-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mutation of Arginine 228 to Lysine Enhances the Glucosyltransferase Activity of Bovine beta-1,4-Galactosyltransferase I Biochemistry, 44, 2005
2PI8	Crystal structure of E. coli MltA with bound chitohexaose 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-bound lytic murein transglycosylase A, PHOSPHATE ION 著者 van Straaten, K.E, Barends, T.R.M, Dijkstra, B.W, Thunnissen, A.M.W.H. 登録日 2007-04-13 公開日 2007-05-08 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage J.Biol.Chem., 282, 2007
2PJJ	E. coli lytic transglycosylase MltA-D308A in apo-1 form 分子名称: Membrane-bound lytic murein transglycosylase A 著者 van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H. 登録日 2007-04-16 公開日 2007-05-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage J.Biol.Chem., 282, 2007
7CZA	Hexachlorobenzene monooxygenase (HcbA1) from Nocardioides sp. strain PD653 complexed with FMN 分子名称: FLAVIN MONONUCLEOTIDE, Hexachlorobenzene oxidative dehalogenase 著者 Guo, Y, Zheng, J.T, Zhou, N.Y. 登録日 2020-09-07 公開日 2020-09-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights. Appl.Environ.Microbiol., 87, 2020
7CZ3	Crystal strcuture of Acyl-CoA thioesterase from Bacillus cereus ATCC 14579 分子名称: Acyl-CoA hydrolase, COENZYME A 著者 Park, J, Kim, K.-J. 登録日 2020-09-07 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for nucleotide-independent regulation of acyl-CoA thioesterase from Bacillus cereus ATCC 14579. Int.J.Biol.Macromol., 170, 2020
7D47	Crystal structure of SARS-CoV-2 Papain-like protease C111S 分子名称: CALCIUM ION, Non-structural protein 3, ZINC ION 著者 Wu, K.-P, Chen, S.-K, Lu, Y.-C, Huang, Y.-C.J, Lee, M.-H. 登録日 2020-09-22 公開日 2020-10-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Crystal structure of SARS-CoV-2 Papain-like protease To Be Published
2OF9	Crystal structure of apo AVR4 (D39A/C122S) 分子名称: Avidin-related protein 4/5, FORMIC ACID 著者 Livnah, O, Hayouka, R, Eisenberg-Domovich, Y. 登録日 2007-01-03 公開日 2007-12-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester. Acta Crystallogr.,Sect.D, 64, 2008
2PSG	REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION 分子名称: PEPSINOGEN 著者 James, M.N.G, Sielecki, A.R. 登録日 1991-01-23 公開日 1992-10-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Refined structure of porcine pepsinogen at 1.8 A resolution. J.Mol.Biol., 219, 1991
3L3A	Bace-1 with the aminopyridine Compound 32 分子名称: 4-(4-{1-[(6-aminopyridin-2-yl)methyl]-5-(2-chlorophenyl)-1H-pyrrol-2-yl}phenoxy)butanenitrile, Beta-secretase 1 著者 Olland, A.M, Chopra, R. 登録日 2009-12-16 公開日 2010-04-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.362 Å) 主引用文献 Novel pyrrolyl 2-aminopyridines as potent and selective human beta-secretase (BACE1) inhibitors. Bioorg.Med.Chem.Lett., 20, 2010
2QJI	M. jannaschii ADH synthase complexed with dihydroxyacetone phosphate and glycerol 分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Putative aldolase MJ0400 著者 Ealick, S.E, Morar, M. 登録日 2007-07-07 公開日 2007-10-30 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids. Biochemistry, 46, 2007
6AG0	The X-ray Crystallographic Structure of Maltooligosaccharide-forming Amylase from Bacillus stearothermophilus STB04 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, CALCIUM ION 著者 Li, Z.F, Li, Y.L, Ban, X.F, Zhang, C.Y, Jin, T.C, Xie, X.F, Gu, Z.B, Li, C.M. 登録日 2018-08-09 公開日 2018-10-10 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of a maltooligosaccharide-forming amylase from Bacillus stearothermophilus STB04. Int.J.Biol.Macromol., 138, 2019
4OVZ	X-Ray Structural and Biological Evaluation of a Series of Potent and Highly Selective Inhibitors of Human Coronavirus Papain-Like Proteases 分子名称: DIMETHYL SULFOXIDE, N-[(4-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Papain-like proteinase, ... 著者 Baez-Santos, Y.M, Mesecar, A. 登録日 2014-01-28 公開日 2014-04-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 X-ray Structural and Biological Evaluation of a Series of Potent and Highly Selective Inhibitors of Human Coronavirus Papain-like Proteases. J.Med.Chem., 57, 2014
2AF4	Phosphotransacetylase from Methanosarcina thermophila co-crystallized with coenzyme A 分子名称: COENZYME A, Phosphate acetyltransferase 著者 Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H. 登録日 2005-07-25 公開日 2006-01-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.147 Å) 主引用文献 Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila. J.Bacteriol., 188, 2006
2AE0	Crystal structure of MltA from Escherichia coli reveals a unique lytic transglycosylase fold 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, Membrane-bound lytic murein transglycosylase A 著者 Van Straaten, K.E, Dijkstra, B.W, Vollmer, W, Thunnissen, A.M.W.H. 登録日 2005-07-21 公開日 2005-10-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of MltA from Escherichia coli Reveals a Unique Lytic Transglycosylase Fold J.Mol.Biol., 352, 2005
2AF3	Phosphotransacetylase from Methanosarcina thermophila soaked with Coenzyme A 分子名称: COENZYME A, Phosphate acetyltransferase, SULFATE ION 著者 Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H. 登録日 2005-07-25 公開日 2006-01-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila. J.Bacteriol., 188, 2006

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