PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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6KVH	The mutant crystal structure of endo-polygalacturonase (T284A) from Talaromyces leycettanus JCM 12802 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose, endo-polygalacturonase 著者 Tu, T, Wang, Z, Luo, H, Yao, B. 登録日 2019-09-04 公開日 2020-09-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural Insights into the Mechanisms Underlying the Kinetic Stability of GH28 Endo-Polygalacturonase. J.Agric.Food Chem., 69, 2021
4YY2	Computationally designed left-handed alpha/alpha toroid with 3 repeats in space group P212121 分子名称: SODIUM ION, dTor_3x33L 著者 Hallinan, J.P, Bradley, P, Stoddard, B.L. 登録日 2015-03-23 公開日 2015-12-16 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.854 Å) 主引用文献 Rational design of alpha-helical tandem repeat proteins with closed architectures. Nature, 528, 2015
4K9C	CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE and 4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-CARBOXYLIC ACID 分子名称: 4-methyl-3,4-dihydro-2H-1,4-benzoxazine-7-carboxylic acid, ADENOSINE, DIMETHYL SULFOXIDE, ... 著者 Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2013-04-19 公開日 2013-05-22 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE and 4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-CARBOXYLIC ACID To be Published
6X67	Cryo-EM structure of piggyBac transposase strand transfer complex (STC) 分子名称: CALCIUM ION, DNA (37-MER), DNA (47-MER), ... 著者 Chen, Q, Hickman, A.B, Dyda, F. 登録日 2020-05-27 公開日 2020-07-22 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Structural basis of seamless excision and specific targeting by piggyBac transposase Nat Commun, 11, 2020
6OCJ	Crystal Structure of Equine Serum Albumin in Complex with Suprofen 分子名称: (2S)-2-[4-(thiophene-2-carbonyl)phenyl]propanoic acid, ACETATE ION, MALONATE ION, ... 著者 Sekula, B, Zielinski, K, Bujacz, A, Bujacz, G. 登録日 2019-03-24 公開日 2020-01-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural investigations of stereoselective profen binding by equine and leporine serum albumins. Chirality, 32, 2020
6X6L	Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR 分子名称: Cag pathogenicity island protein (Cag7), Cag pathogenicity island protein (Cag8) 著者 Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B. 登録日 2020-05-28 公開日 2020-09-30 最終更新日 2021-04-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex. Elife, 9, 2020
6X74	Rev1 Mg2+-facilitated Product Complex with no monophosphates 分子名称: CHLORIDE ION, DNA (5'-D(*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*GP*C*)-3'), DNA (5'-D(P*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ... 著者 Weaver, T.M, Freudenthal, B.D. 登録日 2020-05-29 公開日 2020-09-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Visualizing Rev1 catalyze protein-template DNA synthesis. Proc.Natl.Acad.Sci.USA, 117, 2020
6X7L	LnmK in complex with 2-nitronate-propionyl-CoA 分子名称: ALANINE, Bifunctional methylmalonyl-CoA:ACP acyltransferase/decarboxylase, SULFATE ION, ... 著者 Stunkard, L.M, Kick, B.J, Lohman, J.R. 登録日 2020-05-30 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structures of LnmK, a Bifunctional Acyltransferase/Decarboxylase, with Substrate Analogues Reveal the Basis for Selectivity and Stereospecificity. Biochemistry, 60, 2021
5ZQN	Crystal structure of Mycobacterium tuberculosis HisB in complex with a ligand 分子名称: (2R,3S)-2,3-dihydroxy-3-(1H-imidazol-5-yl)propyl dihydrogen phosphate, CHLORIDE ION, Imidazoleglycerol-phosphate dehydratase, ... 著者 Kumar, D, Pal, R.K, Biswal, B.K. 登録日 2018-04-19 公開日 2018-05-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase. Proteins, 2021
4Z0V	The structure of human PDE12 residues 161-609 分子名称: 2',5'-phosphodiesterase 12, GLYCEROL, MAGNESIUM ION 著者 Nolte, R.T, Wisely, B, Wang, L, Wood, E.R. 登録日 2015-03-26 公開日 2015-06-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors. J.Biol.Chem., 290, 2015
2LRT	Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus 分子名称: Uncharacterized protein 著者 Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2012-04-13 公開日 2012-04-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus To be Published
6OH9	Yeast Guanine Deaminase 分子名称: NONAETHYLENE GLYCOL, SULFATE ION, Yeast Guanine Deaminase, ... 著者 Shek, R.S, French, J.B. 登録日 2019-04-05 公開日 2019-07-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural Determinants for Substrate Selectivity in Guanine Deaminase Enzymes of the Amidohydrolase Superfamily. Biochemistry, 58, 2019
4OVM	Crystal structure of SgcJ protein from Streptomyces carzinostaticus 分子名称: uncharacterized protein SgcJ 著者 Chang, C, Bigelow, L, Clancy, S, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro) 登録日 2013-11-20 公開日 2013-12-25 最終更新日 2023-03-22 実験手法 X-RAY DIFFRACTION (2.719 Å) 主引用文献 Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027. J.Antibiot., 2016
6HFZ	Crystal structure of a two-domain esterase (CEX) active on acetylated mannans 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, GDSL-like protein 著者 Michalak, L, La Rosa, S.L, Rohr, A.K, Aachmann, F.L, Westereng, B. 登録日 2018-08-22 公開日 2019-09-11 最終更新日 2020-04-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A pair of esterases from a commensal gut bacterium remove acetylations from all positions on complex beta-mannans. Proc.Natl.Acad.Sci.USA, 117, 2020
5HAU	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A. 登録日 2015-12-30 公開日 2016-04-06 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition. Nucleic Acids Res., 44, 2016
6DFW	TCR 8F10 in complex with IAg7-p8G9E 分子名称: 8F10 alpha chain, 8F10 beta chain, H-2 class II histocompatibility antigen, ... 著者 Wang, Y, Dai, S. 登録日 2018-05-15 公開日 2019-04-17 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 How C-terminal additions to insulin B-chain fragments create superagonists for T cells in mouse and human type 1 diabetes. Sci Immunol, 4, 2019
4Z9A	Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with phenylmethanesulfonic acid 分子名称: GLYCEROL, Low molecular weight phosphotyrosine protein phosphatase, SULFATE ION, ... 著者 Trivella, D.B.B, Fonseca, E.M.B, Scorsato, V, Dias, M.P, Aparicio, R. 登録日 2015-04-10 公開日 2015-07-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates. Bioorg.Med.Chem., 23, 2015
4Z9B	Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with benzylphosphonic acid 分子名称: Low molecular weight phosphotyrosine protein phosphatase, benzylphosphonic acid 著者 Fonseca, E.M.B, Trivella, D.B.B, Scorsato, V, Dias, M.P, de Oliveira, F.L, Miranda, P.C.M.L, Aparicio, R. 登録日 2015-04-10 公開日 2015-07-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates. Bioorg.Med.Chem., 23, 2015
1WV6	X-ray structure of the A-decamer GCGTATACGC with a single 2'-O-butyl thymine in place of T6, Sr-form 分子名称: 5'-D(*GP*CP*GP*TP*AP*(2BT)P*AP*CP*GP*C)-3', STRONTIUM ION 著者 Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharam, M. 登録日 2004-12-11 公開日 2005-06-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Probing the influence of stereoelectronic effects on the biophysical properties of oligonucleotides: comprehensive analysis of the RNA affinity, nuclease resistance, and crystal structure of ten 2'-O-ribonucleic acid modifications. Biochemistry, 44, 2005
9GDK	Jumonji domain-containing protein 1C with crystallization epitope mutations L2440Y:G2444H 分子名称: Probable JmjC domain-containing histone demethylation protein 2C 著者 Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC) 登録日 2024-08-05 公開日 2024-08-21 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants To Be Published
4ZA0	Structure of Human Enolase 2 in complex with Phosphonoacetohydroxamate 分子名称: Gamma-enolase, MAGNESIUM ION, PHOSPHONOACETOHYDROXAMIC ACID 著者 Leonard, P.G, Maxwell, D, Czako, B, Muller, F.L. 登録日 2015-04-13 公開日 2016-04-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 SF2312 is a natural phosphonate inhibitor of enolase. Nat.Chem.Biol., 12, 2016
6HKG	Structure of FISW84 Fab Fragment 分子名称: FISW84 Fab Fragment Heavy Chain, FISW84 Fab Fragment Light Chain, SULFATE ION 著者 Benton, D.J, Rosenthal, P.B. 登録日 2018-09-06 公開日 2018-09-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Influenza hemagglutinin membrane anchor. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7SJJ	Crystal structure of photoactive yellow protein (PYP); F96oCNF construct 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Weaver, J.B, Kirsh, J.M, Boxer, S.G. 登録日 2021-10-17 公開日 2022-05-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments. J.Am.Chem.Soc., 144, 2022
4OMR	Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA 分子名称: ACETOACETYL-COENZYME A, BENZAMIDINE, Enoyl-CoA hydratase 著者 Langner, K.M, Cooper, D.R, Chapman, H.C, Handing, K.B, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2014-01-27 公開日 2014-04-02 最終更新日 2022-04-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA To be Published
4ONT	Ternary host recognition complex of complement factor H, C3d, and sialic acid 分子名称: Complement C3d fragment, Complement factor H, GLYCEROL, ... 著者 Blaum, B.S, Stehle, T.S. 登録日 2014-01-29 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for sialic acid-mediated self-recognition by complement factor H. Nat.Chem.Biol., 11, 2015

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