PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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3C1C	The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure 分子名称: Histone 2, H2bf, Histone H2A type 1, ... 著者 Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K. 登録日 2008-01-22 公開日 2008-10-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure. Nat.Struct.Mol.Biol., 15, 2008
4FD8	Structure of apo S70C SHV beta-lactamase 分子名称: Beta-lactamase SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE 著者 Rodkey, E.A, van den Akker, F. 登録日 2012-05-26 公開日 2012-09-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Crystal structure of a pre-acylation complex of the beta-lactamase inhibitor, sulbactam, bound to a sulfenamide bond containing thiol-beta-lactamase J.Am.Chem.Soc., 134, 2012
3BWT	Crystal structure of the RNA binding domain of Puf4 from Saccharomyces cerevisiae 分子名称: Protein PUF4 著者 Miller, M.T, Higgin, J.J, Hall, T.M.T. 登録日 2008-01-10 公開日 2008-03-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p Nat.Struct.Mol.Biol., 15, 2008
4FJ0	Crystal structure of the ternary complex between a fungal 17beta-hydroxysteroid dehydrogenase (Holo form) and 3,7-dihydroxy flavone 分子名称: 1,2-ETHANEDIOL, 17beta-hydroxysteroid dehydrogenase, 3,7-dihydroxy-2-phenyl-4H-chromen-4-one, ... 著者 Cassetta, A, Lamba, D, Krastanova, I. 登録日 2012-06-11 公開日 2013-07-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for inhibition of 17 beta-hydroxysteroid dehydrogenases by phytoestrogens: The case of fungal 17 beta-HSDcl. J. Steroid Biochem. Mol. Biol., 171, 2017
3VI7	Human hematopoietic prostaglandin D synthase inhibitor complex structures 分子名称: CALCIUM ION, CIBACRON BLUE, GLUTATHIONE, ... 著者 Kado, Y, Inoue, T. 登録日 2011-09-21 公開日 2012-04-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Human hematopoietic prostaglandin D synthase inhibitor complex structures J.Biochem., 151, 2012
4FDN	Mycobacterium tuberculosis DprE1 in complex with CT325 - hexagonal crystal form 分子名称: 3-(hydroxyamino)-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide, FLAVIN-ADENINE DINUCLEOTIDE, oxidoreductase DprE1 著者 Batt, S.M, Besra, G.S, Futterer, K. 登録日 2012-05-29 公開日 2012-07-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis of inhibition of Mycobacterium tuberculosis DprE1 by benzothiazinone inhibitors. Proc.Natl.Acad.Sci.USA, 109, 2012
3BWZ	Crystal structure of the type II cohesin module from the cellulosome of Acetivibrio cellulolyticus with an extended linker conformation 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cellulosomal scaffoldin adaptor protein B, ... 著者 Noach, I, Lamed, R, Shimon, L.J.W, Bayer, E, Frolow, F. 登録日 2008-01-10 公開日 2009-01-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Intermodular linker flexibility revealed from crystal structures of adjacent cellulosomal cohesins of Acetivibrio cellulolyticus. J.Mol.Biol., 391, 2009
3C2U	Structure of the two subsite D-xylosidase from Selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Xylosidase/arabinosidase 著者 Brunzelle, J.S, Jordan, D.B, McCaslin, D.R, Olczak, A, Wawrzak, A. 登録日 2008-01-25 公開日 2008-04-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure of the two-subsite beta-d-xylosidase from Selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane. Arch.Biochem.Biophys., 474, 2008
3C4V	Structure of the retaining glycosyltransferase MshA:The first step in mycothiol biosynthesis. Organism: Corynebacterium glutamicum : Complex with UDP and 1L-INS-1-P. 分子名称: L-MYO-INOSITOL-1-PHOSPHATE, MAGNESIUM ION, Predicted glycosyltransferases, ... 著者 Vetting, M.W, Frantom, P.A, Blanchard, J.S. 登録日 2008-01-30 公開日 2008-04-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural and Enzymatic Analysis of MshA from Corynebacterium glutamicum: SUBSTRATE-ASSISTED CATALYSIS J.Biol.Chem., 283, 2008
3C5D	Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin 分子名称: 'HIV-1 subtype F genomic RNA, (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R ,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMET HYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL, POTASSIUM ION 著者 Freisz, S, Lang, K, Micura, R, Dumas, P, Ennifar, E. 登録日 2008-01-31 公開日 2008-05-06 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site. Angew.Chem.Int.Ed.Engl., 47, 2008
4FF1	N4 mini-vRNAP transcription initiation complex, 1 min after soaking GTP, ATP and Mn 分子名称: Bacteriophag N4 P2 promoter, PHOSPHATE ION, Virion RNA polymerase 著者 Murakami, K.S, Basu, R.S. 登録日 2012-05-30 公開日 2012-12-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Watching the Bacteriophage N4 RNA Polymerase Transcription by Time-dependent Soak-trigger-freeze X-ray Crystallography. J.Biol.Chem., 288, 2013
3BYW	Crystal structure of an extracellular domain of arabinofuranosyltransferase from Corynebacterium diphtheriae 分子名称: ACETATE ION, Putative arabinofuranosyltransferase, ZINC ION 著者 Tan, K, Hatzos, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-01-16 公開日 2008-02-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The structure of an extracellular domain of arabinofuranosyltransferase from Corynebacterium diphtheriae. To be Published
3C6M	Crystal structure of human spermine synthase in complex with spermine and 5-methylthioadenosine 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMINE, Spermine synthase 著者 Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Pegg, A.E, Plotnikov, A.N, Structural Genomics Consortium (SGC) 登録日 2008-02-04 公開日 2008-02-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of human spermine synthase: implications of substrate binding and catalytic mechanism. J.Biol.Chem., 283, 2008
4FHG	Spore photoproduct lyase C140S mutant 分子名称: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
3C78	0.98 A crystal structure of nitrophorin 4 from Rhodnius prolixus containing FE(III) 2,4 dimethyl deuteroporphyrin ix complexed with ammonia at ph 7.5 分子名称: AMMONIA, FE(III) 2,4-DIMETHYL DEUTEROPORPHYRIN IX, Nitrophorin-4 著者 Amoia, A.M, Montfort, W.R. 登録日 2008-02-06 公開日 2008-03-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Heme Distortion in Nitrophorin 4: High Resolution Structures of Mutated Positions L123V and L133V and Heme Altered Proteins To be Published
4FHZ	Crystal structure of a carboxyl esterase at 2.0 angstrom resolution 分子名称: DI(HYDROXYETHYL)ETHER, Phospholipase/Carboxylesterase, SODIUM ION 著者 Wu, L, Ma, J, Zhou, J, Yu, H. 登録日 2012-06-07 公開日 2012-10-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Enhanced enantioselectivity of a carboxyl esterase from Rhodobacter sphaeroides by directed evolution. Appl.Microbiol.Biotechnol., 97, 2013
3C6B	Reaction product of paraoxon and S-formylglutathione hydrolase W197I mutant 分子名称: S-formylglutathione hydrolase 著者 Legler, P.M, Millard, C.B. 登録日 2008-02-04 公開日 2008-08-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Structural characterization and reversal of the natural organophosphate resistance of a D-type esterase, Saccharomyces cerevisiae S-formylglutathione hydrolase. Biochemistry, 47, 2008
4F8V	Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form) 分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, RNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3') 著者 Kondo, J, Koganei, M, Kasahara, T. 登録日 2012-05-18 公開日 2012-08-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure and specific binding mode of sisomicin to the bacterial ribosomal decoding site. Acs Med.Chem.Lett., 3, 2012
3C0P	Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog HA-8 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokinin dehydrogenase 1, ... 著者 Briozzo, P, Kopecny, D. 登録日 2008-01-21 公開日 2008-07-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor J.Mol.Biol., 380, 2008
3C6K	Crystal structure of human spermine synthase in complex with spermidine and 5-methylthioadenosine 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMIDINE, Spermine synthase 著者 Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Pegg, A.E, Plotnikov, A.N, Structural Genomics Consortium (SGC) 登録日 2008-02-04 公開日 2008-02-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of human spermine synthase: implications of substrate binding and catalytic mechanism. J.Biol.Chem., 283, 2008
4FIG	Catalytic domain of human PAK4 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase PAK 4 著者 Ha, B.H, Boggon, T.J. 登録日 2012-06-08 公開日 2012-09-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Type II p21-activated kinases (PAKs) are regulated by an autoinhibitory pseudosubstrate. Proc.Natl.Acad.Sci.USA, 109, 2012
3C7E	Crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis. 分子名称: CALCIUM ION, Endo-1,4-beta-xylanase, FORMIC ACID, ... 著者 Vandermarliere, E, Bourgois, T.M, Winn, M.D, Van Campenhout, S, Volckaert, G, Strelkov, S.V, Delcour, J.A, Rabijns, A, Courtin, C.M. 登録日 2008-02-07 公開日 2008-11-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared with other members of the same family. Biochem.J., 418, 2009
4F94	Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin 分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, Beta-lactamase, SULFATE ION 著者 June, C.M, Vallier, B.C, Bonomo, R.A, Leonard, D.A, Powers, R.A. 登録日 2012-05-18 公開日 2013-08-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin To be Published
3C14	Complex of GS-Alpha with the Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with Pyrophosphate and Ca 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Adenylate cyclase type 2, Adenylate cyclase type 5, ... 著者 Mou, T.-C, Sprang, S.R. 登録日 2008-01-22 公開日 2009-02-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 Structural basis for inhibition of mammalian adenylyl cyclase by calcium. Biochemistry, 48, 2009
4FIW	X-ray crystal structure of Corynebacterium glutamicum Nrdh-redoxin at 1.5A 分子名称: GLYCEROL, Putative glutaredoxin NrdH, SULFATE ION 著者 Messens, J, Dufe, V.T, Khadija, W. 登録日 2012-06-11 公開日 2013-02-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5011 Å) 主引用文献 NrdH-redoxin of Mycobacterium tuberculosis and Corynebacterium glutamicum Dimerizes at High Protein Concentration and Exclusively Receives Electrons from Thioredoxin Reductase. J.Biol.Chem., 288, 2013

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