PDB: 213 件ウェブページステータス検索Chemie searchBIRD

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4V8I	Crystal structure of YfiA bound to the 70S ribosome. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Polikanov, Y.S, Blaha, G.M, Steitz, T.A. 登録日 2011-12-12 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 How hibernation factors RMF, HPF, and YfiA turn off protein synthesis. Science, 336, 2012
4V9R	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Bulkley, D.P, Brandi, L, Polikanov, Y.S, Fabbretti, A, O'Connor, M, Gualerzi, C.O, Steitz, T.A. 登録日 2013-12-05 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation. Cell Rep, 6, 2014
4V6G	Initiation complex of 70S ribosome with two tRNAs and mRNA. 分子名称: 16S RRNA (E.COLI NUMBERING), 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Jenner, L.B, Yusupova, G, Yusupov, M. 登録日 2009-07-10 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural aspects of messenger RNA reading frame maintenance by the ribosome. Nat.Struct.Mol.Biol., 17, 2010
6GSL	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Yusupov, M, Yusupova, G. 登録日 2018-06-14 公開日 2018-07-04 最終更新日 2018-09-05 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria. Nucleic Acids Res., 46, 2018
7NS3	Substrate receptor scaffolding module of yeast Chelator-GID SR4 E3 ubiquitin ligase bound to Fbp1 substrate 分子名称: BJ4_G0018240.mRNA.1.CDS.1, Fructose-bisphosphatase, Glucose-induced degradation protein 8, ... 著者 Sherpa, D, Chrustowicz, J, Prabu, J.R, Schulman, B.A. 登録日 2021-03-05 公開日 2021-05-05 最終更新日 2021-07-07 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme. Mol.Cell, 81, 2021
7VGW	Yeast gid10 with Pro-peptide 分子名称: BJ4_G0041530.mRNA.1.CDS.1 著者 Shin, J.S, Park, S.H, Kim, L, Heo, J, Song, H.K. 登録日 2021-09-19 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of yeast Gid10 in complex with Pro/N-degron. Biochem.Biophys.Res.Commun., 582, 2021
7BP3	Cryo-EM structure of the human MCT2 分子名称: Monocarboxylate transporter 2 著者 Zhang, B, Jin, Q, Zhang, X, Guo, J, Ye, S. 登録日 2020-03-21 公開日 2020-06-03 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Cooperative transport mechanism of human monocarboxylate transporter 2. Nat Commun, 11, 2020
7AN4	MlghB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni complex with GDP-mannose 分子名称: GUANOSINE-5'-DIPHOSPHATE, Thymidine diphospho-4-keto-rhamnose 3,5-epimerase 著者 Naismith, J.H, Woodward, L. 登録日 2020-10-10 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 MghlB with GDP To Be Published
7ANG	MlghB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni 分子名称: Thymidine diphospho-4-keto-rhamnose 3,5-epimerase 著者 Naismith, J.H, Woodward, L. 登録日 2020-10-11 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 MghlB To Be Published
7ANC	MlghC, GDP-mannoheptose C4 reductase from Campylobacter jejuni with NADP bound 分子名称: GDP-L-fucose synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Naismith, J.H, Woodward, L. 登録日 2020-10-11 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 MghlC To Be Published
4NXT	Crystal structure of the cytosolic domain of human MiD51 分子名称: GLYCEROL, Mitochondrial dynamic protein MID51, SULFATE ION 著者 Richter, V, Ryan, M.T, Kvansakul, M. 登録日 2013-12-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission. J.Cell Biol., 204, 2014
4NXV	Crystal structure of the cytosolic domain of human MiD51 分子名称: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, Mitochondrial dynamic protein MID51, ... 著者 Richter, V, Kvansakul, M, Ryan, M.T. 登録日 2013-12-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission. J.Cell Biol., 204, 2014
4NXU	Crystal structure of the cytosolic domain of human MiD51 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Mitochondrial dynamic protein MID51, ... 著者 Richter, V, Kvansakul, M, Ryan, M.T. 登録日 2013-12-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission. J.Cell Biol., 204, 2014
4NXX	Crystal structure of the cytosolic domain of human MiD51 分子名称: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial dynamic protein MID51 著者 Richter, V, Kvansakul, M, Ryan, M.T. 登録日 2013-12-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission. J.Cell Biol., 204, 2014
4NXW	Crystal structure of the cytosolic domain of human MiD51 分子名称: ADENOSINE-5'-DIPHOSPHATE, Mitochondrial dynamic protein MID51 著者 Richter, V, Kvansakul, M, Ryan, M.T. 登録日 2013-12-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission. J.Cell Biol., 204, 2014
2MAM	Solution structure of the interdigitated double Tudor domain of RBBP1 分子名称: AT-rich interactive domain-containing protein 4A 著者 Gong, W, Feng, Y. 登録日 2013-07-15 公開日 2014-01-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Retinoblastoma-binding protein 1 has an interdigitated double Tudor domain with DNA binding activity. J.Biol.Chem., 289, 2014
2YRV	Solution structure of the RBB1NT domain of human RB(retinoblastoma)-binding protein 1 分子名称: AT-rich interactive domain-containing protein 4A 著者 Nameki, N, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-03 公開日 2008-04-08 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the RBB1NT domain of human RB(retinoblastoma)-binding protein 1 To be Published
7QQY	yeast Gid10 bound to Art2 Pro/N-degron 分子名称: CHLORIDE ION, ECM21, Uncharacterized protein YGR066C 著者 Chrustowicz, J, Sherpa, D, Schulman, B.A. 登録日 2022-01-10 公開日 2022-03-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 A GID E3 ligase assembly ubiquitinates an Rsp5 E3 adaptor and regulates plasma membrane transporters. Embo Rep., 23, 2022
5V8T	Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354 分子名称: 2-{[3,5-bis(2-methoxyethoxy)benzene-1-carbonyl]amino}ethyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, FORMIC ACID, MAGNESIUM ION, ... 著者 Lorimer, D.D, Dranow, D.M, Seufert, F, Abendroth, J, Holzgrabe, U. 登録日 2017-03-22 公開日 2018-03-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354 to be published
5VDC	Crystal structure of the human DPF2 tandem PHD finger domain 分子名称: 1,2-ETHANEDIOL, GLYCEROL, ZINC ION, ... 著者 Huber, F.M, Davenport, A.M, Hoelz, A. 登録日 2017-04-01 公開日 2017-05-24 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Histone-binding of DPF2 mediates its repressive role in myeloid differentiation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7WUG	GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module 分子名称: Glucose-induced degradation protein 8, HLJ1_G0042170.mRNA.1.CDS.1, Vacuolar import and degradation protein 24, ... 著者 Qiao, S, Cheng, J.D, Schulman, B.A. 登録日 2022-02-08 公開日 2022-06-08 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation. Nat Commun, 13, 2022
6O49	CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339 分子名称: (2~{S})-~{N}-[3-oxidanylidene-3-[(3,4,5-trimethoxyphenyl)amino]propyl]-1-(phenylmethyl)sulfonyl-piperidine-2-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-02-28 公開日 2020-02-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339 to be published
6O4A	CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF355 分子名称: 2-(pyridin-3-ylcarbonylamino)ethyl (2~{S})-1-(phenylmethyl)sulfonylpiperidine-2-carboxylate, CALCIUM ION, Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-02-28 公開日 2020-02-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF355 to be published
4FAO	Specificity and Structure of a high affinity Activin-like 1 (ALK1) signaling complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2B, Growth/differentiation factor 2, ... 著者 Townson, S.A, Martinez-Hackert, E, Greppi, C, Lowden, P, Sako, D, Liu, J, Ucran, J.A, Liharska, K, Underwood, K.W, Seehra, J, Kumar, R, Grinberg, A.V. 登録日 2012-05-22 公開日 2012-06-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.357 Å) 主引用文献 Specificity and Structure of a High Affinity Activin Receptor-like Kinase 1 (ALK1) Signaling Complex. J.Biol.Chem., 287, 2012
4OAF	Crystal structure of the cytosolic domain of mouse MiD51 分子名称: Mitochondrial dynamic protein MID51 著者 Loson, O.C, Kaiser, J.T, Chan, D.C. 登録日 2014-01-04 公開日 2014-01-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The Mitochondrial Fission Receptor MiD51 Requires ADP as a Cofactor. Structure, 22, 2014

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