PDB: 2232 件ウェブページステータス検索Chemie searchBIRD

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4K96	Structure of Binary Complex of cGAS with Bound dsDNA 分子名称: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ... 著者 Gao, P, Wu, Y, Patel, D.J. 登録日 2013-04-19 公開日 2013-05-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.084 Å) 主引用文献 Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase. Cell(Cambridge,Mass.), 153, 2013
4K98	Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG 分子名称: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ... 著者 Gao, P, Wu, Y, Patel, D.J. 登録日 2013-04-19 公開日 2013-05-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase. Cell(Cambridge,Mass.), 153, 2013
7YVT	S-formylglutathione hydrolase from Variovorax sp. PAMC 28711 分子名称: S-formylglutathione hydrolase 著者 Hwang, J, Do, H, Lee, J.H. 登録日 2022-08-19 公開日 2022-10-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Structural basis for the substrate specificity of an S-formylglutathione hydrolase derived from Variovorax sp. PAMC 28711. Biochem.Biophys.Res.Commun., 629, 2022
4KM5	X-ray crystal structure of human cyclic GMP-AMP synthase (cGAS) 分子名称: Cyclic GMP-AMP synthase, ZINC ION 著者 Kranzusch, P.J, Lee, A.S.Y, Berger, J.M, Doudna, J.A. 登録日 2013-05-08 公開日 2013-05-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.499 Å) 主引用文献 Structure of Human cGAS Reveals a Conserved Family of Second-Messenger Enzymes in Innate Immunity. Cell Rep, 3, 2013
4K99	Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppdG(2 ,5 )pdG 分子名称: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, 3'-deoxy-guanosine 5'-monophosphate, Cyclic GMP-AMP synthase, ... 著者 Gao, P, Wu, Y, Patel, D.J. 登録日 2013-04-19 公開日 2013-05-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase. Cell(Cambridge,Mass.), 153, 2013
1WKB	Crystal Structure of Leucyl-tRNA Synthetase from the Archaeon Pyrococcus horikoshii Reveals a Novel Editing Domain Orientation 分子名称: Leucyl-tRNA synthetase, SULFATE ION 著者 Fukunaga, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-30 公開日 2005-02-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal Structure of Leucyl-tRNA Synthetase from the Archaeon Pyrococcus horikoshii Reveals a Novel Editing Domain Orientation J.Mol.Biol., 346, 2005
3ITY	Metal-free form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: L-rhamnose isomerase 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
1WP6	Crystal structure of maltohexaose-producing amylase from alkalophilic Bacillus sp.707. 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Glucan 1,4-alpha-maltohexaosidase, ... 著者 Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K. 登録日 2004-08-31 公開日 2004-11-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Biochemical and crystallographic analyses of maltohexaose-producing amylase from alkalophilic Bacillus sp. 707 Biochemistry, 43, 2004
8WR8	The Crystal Structure of cGAS from Biortus 分子名称: Cyclic GMP-AMP synthase 著者 Wang, F, Cheng, W, Yuan, Z, Lin, D, Guo, S. 登録日 2023-10-13 公開日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The Crystal Structure of cGAS from Biortus To Be Published
8URV	Solution NMR structure of pro-IL-18 分子名称: Interleukin-18 著者 Bonin, J.P, Aramini, J.M, Kay, L.E. 登録日 2023-10-26 公開日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural transitions enable interleukin-18 maturation and signaling. Immunity, 2024
7PUG	GH115 alpha-1,2-glucuronidase in complex with xylopentaose 分子名称: CALCIUM ION, CHLORIDE ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ... 著者 Wilkens, C, Morth, J.P, Polikarpov, I. 登録日 2021-09-29 公開日 2022-01-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 A GH115 alpha-glucuronidase structure reveals dimerization-mediated substrate binding and a proton wire potentially important for catalysis. Acta Crystallogr D Struct Biol, 78, 2022
8WZL	Arabidopsis thaliana Histone deacetylase 7 (HDA7) 分子名称: Histone deacetylase 7, SULFATE ION 著者 Saharan, K, Vasudevan, D. 登録日 2023-11-02 公開日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure-function analyses reveal Arabidopsis thaliana HDA7 to be an inactive histone deacetylase. Curr Res Struct Biol, 7, 2024
7PXQ	GH115 alpha-1,2-glucuronidase D303A 分子名称: CALCIUM ION, xylan alpha-1,2-glucuronidase 著者 Wilkens, C, Morth, J.P, Polikarpov, I. 登録日 2021-10-08 公開日 2022-01-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A GH115 alpha-glucuronidase structure reveals dimerization-mediated substrate binding and a proton wire potentially important for catalysis. Acta Crystallogr D Struct Biol, 78, 2022
3ITO	Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with D-psicose 分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-psicofuranose 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
5XUX	Crystal structure of Rib7 from Methanosarcina mazei 分子名称: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H. 登録日 2017-06-26 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference. Biochem. Biophys. Res. Commun., 503, 2018
4MEC	Crystal structure of RAT Heme oxygenase-1 in complex with ZN(II)-Protoporphyrin IX 分子名称: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING ZN 著者 Sugishima, M. 登録日 2013-08-26 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations Biochemistry, 54, 2015
1WE2	Crystal structure of shikimate kinase from mycobacterium tuberculosis in complex with MGADP and shikimic acid 分子名称: 3-DEHYDROSHIKIMATE, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... 著者 Pereira, J.H, de Oliveira, J.S, Canduri, F, Dias, M.V, Palma, M.S, Basso, L.A, Santos, D.S, de Azevedo Jr, W.F. 登録日 2004-05-22 公開日 2005-05-17 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of shikimate kinase from Mycobacterium tuberculosis reveals the binding of shikimic acid. Acta Crystallogr.,Sect.D, 60, 2004
5XV0	Crystal structure of Rib7 mutant D33N from Methanosarcina mazei 分子名称: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H. 登録日 2017-06-26 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference. Biochem. Biophys. Res. Commun., 503, 2018
5XV2	Crystal structure of Rib7 mutant D33A from Methanosarcina mazei 分子名称: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H. 登録日 2017-06-26 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference. Biochem. Biophys. Res. Commun., 503, 2018
2M1J	Ovine Doppel Signal peptide (1-30) 分子名称: Prion-like protein doppel 著者 Pimenta, J, Viegas, A, Sardinha, J, Santos, A, Cantante, C, Dias, F.M.V, Soares, R, Cabrita, E.J, Fontes, C.M.G.A, Prates, J.A.M, Pereira, R.M.L.N. 登録日 2012-11-28 公開日 2013-10-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR solution structure and SRP54M predicted interaction of the N-terminal sequence (1-30) of the ovine Doppel protein. Peptides, 49C, 2013
4MKP	Crystal structure of human cGAS apo form 分子名称: Cyclic GMP-AMP synthase, ZINC ION 著者 Kato, K, Ishii, R, Ishitani, R, Nureki, O. 登録日 2013-09-05 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.953 Å) 主引用文献 Structural and Functional Analyses of DNA-Sensing and Immune Activation by Human cGAS Plos One, 8, 2013
6V6D	Cryo-EM structure of human pannexin 1 分子名称: Pannexin-1 著者 Deng, Z, He, Z, Yuan, P. 登録日 2019-12-05 公開日 2020-04-01 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 Cryo-EM structures of the ATP release channel pannexin 1. Nat.Struct.Mol.Biol., 27, 2020
3I9T	Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithiothreitol (DTT) 分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE 著者 Matsui, T, Unno, M, Ikeda-Saito, M. 登録日 2009-07-13 公開日 2010-05-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase. Inorg.Chem., 49, 2010
3ITT	Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329K in complex with L-rhamnose 分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
4LEV	Structure of human cGAS 分子名称: Cyclic GMP-AMP synthase, ZINC ION 著者 Li, P. 登録日 2013-06-26 公開日 2013-12-25 最終更新日 2014-01-08 実験手法 X-RAY DIFFRACTION (1.952 Å) 主引用文献 Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization. Immunity, 39, 2013

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