PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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3QBW	Crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (ANMK) bound to adenosine diphosphate 分子名称: ADENOSINE-5'-DIPHOSPHATE, Anhydro-N-acetylmuramic acid kinase, SULFATE ION 著者 Bacik, J.P, Martin, D.R, Mark, B.L. 登録日 2011-01-14 公開日 2011-02-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Molecular Basis of 1,6-Anhydro Bond Cleavage and Phosphoryl Transfer by Pseudomonas aeruginosa 1,6-Anhydro-N-acetylmuramic Acid Kinase. J.Biol.Chem., 286, 2011
3OFW	Crystal structure of recombinant Kunitz Type serine protease Inhibitor-1 from the Carribean sea anemone stichodactyla helianthus 分子名称: CHLORIDE ION, Kunitz-type proteinase inhibitor SHPI-1 著者 Garcia-Fernandez, R, Redecke, L, Pons, T, Perbandt, M, Talavera, A, Gil, D, Gonzalez, Y, de los Angeles Chavez, M, Betzel, C. 登録日 2010-08-16 公開日 2011-08-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the recombinant BPTI/Kunitz-type inhibitor rShPI-1A from the marine invertebrate Stichodactyla helianthus. Acta Crystallogr.,Sect.F, 68, 2012
3OGN	Crystal Structure of an Odorant-binding Protein from the Southern House Mosquito Complexed with an Oviposition Pheromone 分子名称: (1S)-1-[(2R)-6-oxotetrahydro-2H-pyran-2-yl]undecyl acetate, MAGNESIUM ION, Odorant-binding protein 著者 Mao, Y, Clardy, J. 登録日 2010-08-17 公開日 2010-11-03 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal and solution structures of an odorant-binding protein from the southern house mosquito complexed with an oviposition pheromone. Proc.Natl.Acad.Sci.USA, 107, 2010
4ISW	Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase 著者 Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W. 登録日 2013-01-17 公開日 2013-12-11 最終更新日 2014-01-15 実験手法 X-RAY DIFFRACTION (3.14 Å) 主引用文献 Crystal structure of phosphoramide-phosphorylated thymidylate synthase reveals pSer127, reflecting probably pHis to pSer phosphotransfer. Bioorg.Chem., 52C, 2013
3QBX	Crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (ANMK) bound to 1,6-anhydro-n-actetylmuramic acid 分子名称: 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, Anhydro-N-acetylmuramic acid kinase, SULFATE ION 著者 Bacik, J.P, Martin, D.R, Mark, B.L. 登録日 2011-01-14 公開日 2011-02-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular Basis of 1,6-Anhydro Bond Cleavage and Phosphoryl Transfer by Pseudomonas aeruginosa 1,6-Anhydro-N-acetylmuramic Acid Kinase. J.Biol.Chem., 286, 2011
3QF6	Neutron structure of type-III Antifreeze Protein allows the reconstruction of AFP-ice interface 分子名称: Type-3 ice-structuring protein HPLC 12 著者 Howard, E.I, Blakeley, M.P, Haertlein, M, Petit-Haertlein, I, Mitschler, A, Fisher, S.J, Cousido-Siah, A, Salvay, A.G, Popov, A, Muller-Dieckmann, C, Petrova, T, Podjarny, A. 登録日 2011-01-21 公開日 2011-06-22 最終更新日 2024-03-20 実験手法 NEUTRON DIFFRACTION (1.85 Å) 主引用文献 Neutron structure of type-III antifreeze protein allows the reconstruction of AFP-ice interface. J.Mol.Recognit., 24, 2011
3QPL	G106W mutant of EthR from Mycobacterium tuberculosis 分子名称: HTH-type transcriptional regulator EthR 著者 Carette, X, Willery, E, Hoos, S, Lecat-Guillet, N, Frenois, F, Dirie, B, Villeret, V, England, P, Deprez, B, Locht, C, Willand, N, Baulard, A. 登録日 2011-02-14 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural activation of the transcriptional repressor EthR from Mycobacterium tuberculosis by single amino acid change mimicking natural and synthetic ligands. Nucleic Acids Res., 40, 2012
4KJK	Room Temperature WT DHFR 分子名称: CALCIUM ION, Dihydrofolate reductase, FOLIC ACID, ... 著者 van den Bedem, H, Bhabha, G, Yang, K, Wright, P.E, Fraser, J.S. 登録日 2013-05-03 公開日 2013-08-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.351 Å) 主引用文献 Automated identification of functional dynamic contact networks from X-ray crystallography. Nat.Methods, 10, 2013
4KQ2	Glucose1,2cyclic phosphate bound activated state of Yeast Glycogen Synthase 分子名称: (2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide, 6-O-phosphono-alpha-D-glucopyranose, BARIUM ION, ... 著者 Chikwana, V.M, Hurley, T.D. 登録日 2013-05-14 公開日 2013-12-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural basis for 2'-phosphate incorporation into glycogen by glycogen synthase. Proc.Natl.Acad.Sci.USA, 110, 2013
3OY6	The crystal structure of uPA complex with peptide inhibitor MH036 at pH4.6 分子名称: MH036, Urokinase-type plasminogen activator 著者 Jiang, L.G, Andreasen, P.A, Huang, M.D. 登録日 2010-09-22 公開日 2011-08-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 The binding mechanism of a peptidic cyclic serine protease inhibitor J.Mol.Biol., 412, 2011
3PDO	Crystal Structure of HLA-DR1 with CLIP102-120 分子名称: FORMIC ACID, GLYCEROL, HLA class II histocompatibility antigen gamma chain, ... 著者 Gunther, S, Schlundt, A, Sticht, J, Roske, Y, Heinemann, U, Wiesmuller, K.-H, Jung, G, Falk, K, Rotzschke, O, Freund, C. 登録日 2010-10-23 公開日 2010-12-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Bidirectional binding of invariant chain peptides to an MHC class II molecule. Proc.Natl.Acad.Sci.USA, 107, 2010
3PLC	Crystal structure of Beta-Cardiotoxin, a novel three-finger cardiotoxin from the venom of Ophiophagus hannah 分子名称: Beta-cardiotoxin OH-27 著者 Roy, A, Qingxiang, S, Kini, R.M, Sivaraman, J. 登録日 2010-11-15 公開日 2011-11-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Identification of a alpha-helical molten globule intermediate and structural characterization of beta-cardiotoxin, an all beta-sheet protein isolated from the venom of Ophiophagus hannah (king cobra). Protein Sci., 28, 2019
3PF4	Crystal structure of Bs-CspB in complex with r(GUCUUUA) 分子名称: Cold shock protein cspB, MAGNESIUM ION, SODIUM ION, ... 著者 Sachs, R, Max, K.E.A, Heinemann, U. 登録日 2010-10-27 公開日 2011-09-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 RNA single strands bind to a conserved surface of the major cold shock protein in crystals and solution. Rna, 18, 2012
3PF5	Crystal structure of Bs-CspB in complex with rU6 分子名称: Cold shock protein cspB, MAGNESIUM ION, hexaribouracil (rU6) 著者 Sachs, R, Max, K.E.A, Heinemann, U. 登録日 2010-10-27 公開日 2011-09-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 RNA single strands bind to a conserved surface of the major cold shock protein in crystals and solution. Rna, 18, 2012
3PFU	N-terminal domain of Thiol:disulfide interchange protein DsbD in its reduced form 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Thiol:disulfide interchange protein dsbD 著者 Mavridou, D.A.I, Saridakis, E, Ferguson, S.J, Redfield, C. 登録日 2010-10-29 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Oxidation state-dependent protein-protein interactions in disulfide cascades J.Biol.Chem., 286, 2011
4I9H	Crystal structure of rabbit LDHA in complex with AP28669 分子名称: 1-O-[3-(5-carboxypyridin-2-yl)-5-fluorophenyl]-6-O-[4-({[(5-carboxypyridin-2-yl)sulfanyl]acetyl}amino)-2-chloro-5-methoxyphenyl]-D-mannitol, L-lactate dehydrogenase A chain 著者 Zhou, T, Stephan, Z.G, Kohlmann, A, Li, F, Commodore, L, Greenfield, M.T, Shakespeare, W.C, Zhu, X, Dalgarno, D.C. 登録日 2012-12-05 公開日 2013-01-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Fragment growing and linking lead to novel nanomolar lactate dehydrogenase inhibitors. J.Med.Chem., 56, 2013
3QLP	X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, ... 著者 Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F. 登録日 2011-02-03 公開日 2011-10-19 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Thrombin-aptamer recognition: a revealed ambiguity. Nucleic Acids Res., 39, 2011
3QX9	Crystal structure of MID domain from hAGO2 in complex with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Protein argonaute-2 著者 Frank, F, Fabian, M.R, Stepinski, J, Jemielity, J, Darzynkiewicz, E, Sonenberg, N, Nagar, B. 登録日 2011-03-01 公開日 2011-04-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis of 5'-mRNA-cap interactions with the human AGO2 MID domain. Embo Rep., 12, 2011
4KUP	Endothiapepsin in complex with 20mM acylhydrazone inhibitor 分子名称: (2S)-2-azanyl-3-(3H-indol-3-yl)-N-[(E)-(2,4,6-trimethylphenyl)methylideneamino]propanamide, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Radeva, N, Heine, A, Klebe, G. 登録日 2013-05-22 公開日 2014-04-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.311 Å) 主引用文献 Structure-based design of inhibitors of the aspartic protease endothiapepsin by exploiting dynamic combinatorial chemistry. Angew.Chem.Int.Ed.Engl., 53, 2014
3QXR	Crystal structure of the brominated CKIT-1 proto-oncogene promoter quadruplex DNA 分子名称: 5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*(BRU)P*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION 著者 Wei, D, Parkinson, G.N, Neidle, S. 登録日 2011-03-02 公開日 2012-01-18 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation. Nucleic Acids Res., 40, 2012
4L6C	Crystal structure of human mitochondrial deoxyribonucleotidase in complex with the inhibitor pib-t 分子名称: 1,2-ETHANEDIOL, 1-{2-deoxy-3,5-O-[(4-iodophenyl)(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione, 5'(3')-deoxyribonucleotidase, ... 著者 Pachl, P, Brynda, J, Rezacova, P. 登録日 2013-06-12 公開日 2014-09-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Conformationally constrained nucleoside phosphonic acids - potent inhibitors of human mitochondrial and cytosolic 5'(3')-nucleotidases. Org.Biomol.Chem., 12, 2014
4L9U	Structure of C-terminal coiled coil of RasGRP1 分子名称: GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION 著者 Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. 登録日 2013-06-18 公開日 2013-08-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.6014 Å) 主引用文献 Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
5IB2	Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Janke, R, Ballaschk, M, Schmieder, P, Uchanska-Ziegler, B, Ziegler, A, Loll, B. 登録日 2016-02-22 公開日 2017-02-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype. J.Biol.Chem., 2019
6M8N	Endo-fucoidan hydrolase P5AFcnA from glycoside hydrolase family 107 分子名称: CALCIUM ION, MALONATE ION, P5AFcnA 著者 Boraston, A.B, Vickers, C.J, Abe, K, Salama-Alber, O. 登録日 2018-08-22 公開日 2018-10-03 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29. J. Biol. Chem., 293, 2018
5IB5	Crystal structure of HLA-B*27:09 complexed with the self-peptide pVIPR and Copper 分子名称: Beta-2-microglobulin, CHLORIDE ION, COPPER (II) ION, ... 著者 Janke, R, Ballaschk, M, Schmieder, P, Uchanska-Ziegler, B, Ziegler, A, Loll, B. 登録日 2016-02-22 公開日 2017-02-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype. J.Biol.Chem., 2019

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