Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LSY
DownloadVisualize
BU of 6lsy by Molmil
AAA+ ATPase, ClpL from Streptococcus pneumoniae - ATP bound
分子名称: ATP-dependent Clp protease, ATP-binding subunit
著者Kim, G, Lee, S.G, Han, S, Jung, J, Jeong, H.S, Hyun, J.K, Rhee, D.K, Kim, H.M, Lee, S.
登録日2020-01-20
公開日2021-01-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.33 Å)
主引用文献ClpL is a functionally active tetradecameric AAA+ chaperone, distinct from hexameric/dodecameric ones.
Faseb J., 34, 2020
6CHA
DownloadVisualize
BU of 6cha by Molmil
STRUCTURE OF A TETRAHEDRAL TRANSITION STATE COMPLEX OF ALPHA-*CHYMOTRYPSIN AT 1.8-*ANGSTROMS RESOLUTION
分子名称: ALPHA-CHYMOTRYPSIN A, PHENYLETHANE BORONIC ACID
著者Tulinsky, A, Blevins, R.A.
登録日1987-02-06
公開日1987-04-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a tetrahedral transition state complex of alpha-chymotrypsin dimer at 1.8-A resolution.
J.Biol.Chem., 262, 1987
6LUY
DownloadVisualize
BU of 6luy by Molmil
Zn- Carbonic Anhydrase II pH 11.0 0 atm CO2
分子名称: Carbonic anhydrase 2, GLYCEROL, ZINC ION
著者Kim, C.U, Kim, J.K.
登録日2020-02-02
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Elucidating the role of metal ions in carbonic anhydrase catalysis.
Nat Commun, 11, 2020
1MSA
DownloadVisualize
BU of 1msa by Molmil
MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS COMPLEXED WITH METHYL-ALPHA-D-MANNOSIDE
分子名称: AGGLUTININ, methyl alpha-D-mannopyranoside
著者Wright, C.S, Hester, G.
登録日1995-03-06
公開日1995-09-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure of mannose-specific snowdrop (Galanthus nivalis) lectin is representative of a new plant lectin family.
Nat.Struct.Biol., 2, 1995
6LV5
DownloadVisualize
BU of 6lv5 by Molmil
Ni- Carbonic Anhydrase II pH 7.8 0 atm CO2
分子名称: Carbonic anhydrase 2, GLYCEROL, NICKEL (II) ION
著者Kim, C.U, Kim, J.K.
登録日2020-02-02
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Elucidating the role of metal ions in carbonic anhydrase catalysis.
Nat Commun, 11, 2020
1AIS
DownloadVisualize
BU of 1ais by Molmil
TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
分子名称: DNA (5'-D(*AP*AP*CP*TP*TP*AP*CP*TP*TP*TP*(5IU)P*(5IU)P*AP*AP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*TP*TP*AP*AP*AP*AP*AP*GP*TP*AP*AP*GP*TP*T )-3'), PROTEIN (TATA-BINDING PROTEIN), ...
著者Kosa, P.F, Ghosh, G, Dedecker, B.S, Sigler, P.B.
登録日1997-04-24
公開日1997-07-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The 2.1-A crystal structure of an archaeal preinitiation complex: TATA-box-binding protein/transcription factor (II)B core/TATA-box.
Proc.Natl.Acad.Sci.USA, 94, 1997
4N9K
DownloadVisualize
BU of 4n9k by Molmil
crystal structure of beta-lactamse PenP_E166S in complex with cephaloridine
分子名称: 5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase
著者Pan, X, Wong, W, Zhao, Y.
登録日2013-10-21
公開日2014-09-10
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
6NKE
DownloadVisualize
BU of 6nke by Molmil
Wild-type GGGPS from Thermoplasma volcanium
分子名称: GLYCEROL, Geranylgeranylglyceryl phosphate synthase, IMIDAZOLE, ...
著者Blank, P.N, Alderfer, K.E, Gillott, B.N, Christianson, D.W, Himmelberger, J.A.
登録日2019-01-07
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural studies of geranylgeranylglyceryl phosphate synthase, a prenyltransferase found in thermophilic Euryarchaeota.
Acta Crystallogr D Struct Biol, 76, 2020
4OD4
DownloadVisualize
BU of 4od4 by Molmil
Apo structure of a UbiA homolog from Aeropyrum pernix K1
分子名称: 4-hydroxybenzoate octaprenyltransferase
著者Li, W, Cheng, W.
登録日2014-01-09
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Structural insights into ubiquinone biosynthesis in membranes.
Science, 343, 2014
6NK4
DownloadVisualize
BU of 6nk4 by Molmil
KVQIINKKL, crystal structure of a tau protein fragment
分子名称: Microtubule-associated protein tau
著者Eisenberg, D.S, Boyer, D.R, Sawaya, M.R.
登録日2019-01-04
公開日2020-01-15
最終更新日2023-10-11
実験手法ELECTRON CRYSTALLOGRAPHY (1.994 Å)
主引用文献Intrinsic electronic conductivity of individual atomically resolved amyloid crystals reveals micrometer-long hole hopping via tyrosines.
Proc.Natl.Acad.Sci.USA, 118, 2021
1MI6
DownloadVisualize
BU of 1mi6 by Molmil
Docking of the modified RF2 X-ray structure into the Low Resolution Cryo-EM map of RF2 E.coli 70S Ribosome
分子名称: peptide chain release factor RF-2
著者Rawat, U.B.S, Zavialov, A.V, Sengupta, J, Valle, M, Grassucci, R.A, Linde, J, Vestergaard, B, Ehrenberg, M, Frank, J.
登録日2002-08-22
公開日2003-01-14
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12.8 Å)
主引用文献A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
6NRB
DownloadVisualize
BU of 6nrb by Molmil
hTRiC-hPFD Class2
分子名称: Prefoldin subunit 1, Prefoldin subunit 2, Prefoldin subunit 3, ...
著者Gestaut, D.R, Roh, S.H, Ma, B, Pintilie, G, Joachimiak, L.A, Leitner, A, Walzthoeni, T, Aebersold, R, Chiu, W, Frydman, J.
登録日2019-01-23
公開日2019-06-19
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis.
Cell, 177, 2019
4EMZ
DownloadVisualize
BU of 4emz by Molmil
HIV-1 Nef in complex with MHC-I cytoplasmic domain and Mu1 adaptin subunit of AP1 adaptor (second domain)
分子名称: AP-1 complex subunit mu-1, MHC-I, Protein Nef
著者Jia, X, Xiong, Y.
登録日2012-04-12
公開日2012-06-20
最終更新日2012-07-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of evasion of cellular adaptive immunity by HIV-1 Nef.
Nat.Struct.Mol.Biol., 19, 2012
7Y8R
DownloadVisualize
BU of 7y8r by Molmil
The nucleosome-bound human PBAF complex
分子名称: ACTB protein (Fragment), ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2, ...
著者Wang, L, Yu, J, Yu, Z, Wang, Q, He, S, Xu, Y.
登録日2022-06-24
公開日2022-12-07
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of nucleosome-bound human PBAF complex.
Nat Commun, 13, 2022
4N9L
DownloadVisualize
BU of 4n9l by Molmil
crystal structure of beta-lactamse PenP_E166S in complex with meropenem
分子名称: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Beta-lactamase
著者Pan, X, Wong, W, Zhao, Y.
登録日2013-10-21
公開日2014-09-10
最終更新日2022-02-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
3GP8
DownloadVisualize
BU of 3gp8 by Molmil
Crystal structure of the binary complex of RecD2 with DNA
分子名称: 5'-D(*TP*TP*TP*TP*TP*T*TP*TP*TP*TP*TP*TP*TP*T)-3', Exodeoxyribonuclease V, subunit RecD, ...
著者Saikrishnan, K, Cook, N, Wigley, D.B.
登録日2009-03-23
公開日2009-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic basis of 5'-3' translocation in SF1B helicases.
Cell(Cambridge,Mass.), 137, 2009
3NGU
DownloadVisualize
BU of 3ngu by Molmil
Structure of Leishmania NDKb complexed with ADP.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
1RLD
DownloadVisualize
BU of 1rld by Molmil
SOLID-STATE PHASE TRANSITION IN THE CRYSTAL STRUCTURE OF RIBULOSE 1,5-BIPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE
分子名称: RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LARGE CHAIN), RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (SMALL CHAIN)
著者Zhang, K.Y.J, Eisenberg, D.
登録日1993-12-10
公開日1994-04-30
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Solid-state phase transition in the crystal structure of ribulose 1,5-bisphosphate carboxylase/oxygenase.
Acta Crystallogr.,Sect.D, 50, 1994
3NGR
DownloadVisualize
BU of 3ngr by Molmil
Crystal structure of Leishmania nucleoside diphosphate kinase b with unordered nucleotide-binding loop.
分子名称: Nucleoside diphosphate kinase, PHOSPHATE ION
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
4E0T
DownloadVisualize
BU of 4e0t by Molmil
Crystal structure of CdpNPT in its unbound state
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cyclic dipeptide N-prenyltransferase, ...
著者Schuller, J.M, Zocher, G, Stehle, T.
登録日2012-03-05
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and catalytic mechanism of a cyclic dipeptide prenyltransferase with broad substrate promiscuity.
J.Mol.Biol., 422, 2012
4N92
DownloadVisualize
BU of 4n92 by Molmil
Crystal structure of beta-lactamse PenP_E166S
分子名称: Beta-lactamase
著者Pan, X, Wong, W, Zhao, Y.
登録日2013-10-19
公開日2014-09-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
3CMW
DownloadVisualize
BU of 3cmw by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DT)-3'), MAGNESIUM ION, ...
著者Pavletich, N.P.
登録日2008-03-24
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
2LKY
DownloadVisualize
BU of 2lky by Molmil
Solution structure of MSMEG_1053, the second DUF3349 annotated protein in the genome of Mycobacterium smegmatis, Seattle Structural Genomics Center for Infectious Disease target MysmA.17112.b
分子名称: Uncharacterized protein
著者Buchko, G.W, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-10-22
公開日2011-11-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural diversity in the Mycobacteria DUF3349 superfamily.
Protein Sci., 29, 2020
3TYK
DownloadVisualize
BU of 3tyk by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(4)-Ia
分子名称: CHLORIDE ION, HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase
著者Stogios, P.J, Shabalin, I.G, Shakya, T, Evdokmova, E, Fan, Y, Chruszcz, M, Minor, W, Wright, G.D, Savchenko, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2011-09-26
公開日2011-10-12
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and function of APH(4)-Ia, a hygromycin B resistance enzyme.
J.Biol.Chem., 286, 2011
3CMV
DownloadVisualize
BU of 3cmv by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein recA
著者Pavletich, N.P.
登録日2008-03-24
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon