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2H5Q
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Crystal structure of mCherry
分子名称: mCherry
著者Shu, X, Remington, S.J.
登録日2006-05-26
公開日2006-08-22
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Novel Chromophores and Buried Charges Control Color in mFruits
Biochemistry, 45, 2006
3KK8
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BU of 3kk8 by Molmil
CaMKII Substrate Complex A
分子名称: Calcium/calmodulin dependent protein kinase II, MAGNESIUM ION
著者Kuriyan, J, Chao, L.H, Pellicena, P, Deindl, S, Barclay, L.A, Schulman, H.
登録日2009-11-04
公開日2010-02-09
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation.
Nat.Struct.Mol.Biol., 17, 2010
1ZDJ
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BU of 1zdj by Molmil
STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX
分子名称: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*GP*GP*AP*UP*CP*AP*CP*C)-3')
著者Grahn, E, Stonehouse, N, Valegard, K, Vandenworm, S, Liljas, L.
登録日1997-12-18
公開日1998-07-08
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements.
RNA, 5, 1999
1SMY
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BU of 1smy by Molmil
Structural basis for transcription regulation by alarmone ppGpp
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Artsimovitch, I, Patlan, V, Sekine, S, Vassylyeva, M.N, Hosaka, T, Ochi, K, Yokoyama, S, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for transcription regulation by alarmone ppGpp
Cell(Cambridge,Mass.), 117, 2004
1YVY
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BU of 1yvy by Molmil
Crystal structure of Anaerobiospirillum succiniciproducens phosphoenolpyruvate carboxykinase
分子名称: Phosphoenolpyruvate carboxykinase [ATP]
著者Cotelesage, J.J, Prasad, L, Zeikus, J.G, Laivenieks, M, Delbaere, L.T.
登録日2005-02-16
公開日2005-07-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of Anaerobiospirillum succiniciproducens PEP carboxykinase reveals an important active site loop.
Int.J.Biochem.Cell Biol., 37, 2005
3KMQ
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BU of 3kmq by Molmil
G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure
分子名称: 3D polymerase, RNA (5'-R(*GP*GP*CP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*CP*C)-3')
著者Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R.
登録日2009-11-11
公開日2010-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin
J.Virol., 84, 2010
1S5N
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BU of 1s5n by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
分子名称: HYDROXIDE ION, MANGANESE (II) ION, SODIUM ION, ...
著者Fenn, T.D, Ringe, D, Petsko, G.A.
登録日2004-01-21
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
1SE8
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Structure of single-stranded DNA-binding protein (SSB) from D. radiodurans
分子名称: Single-strand binding protein
著者Bernstein, D.A, Eggington, J.M, Killoran, M.P, Misic, A.M, Cox, M.M, Keck, J.L.
登録日2004-02-16
公開日2004-06-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the Deinococcus radiodurans single-stranded DNA-binding protein suggests a mechanism for coping with DNA damage.
Proc.Natl.Acad.Sci.USA, 101, 2004
1S48
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BU of 1s48 by Molmil
Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-15
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1RXV
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BU of 1rxv by Molmil
Crystal Structure of A. Fulgidus FEN-1 bound to DNA
分子名称: 5'-d(*T*pA*pG*pC*pA*pT*pC*pG*pG), Flap structure-specific endonuclease
著者Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
登録日2003-12-18
公開日2004-01-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004
1S4F
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BU of 1s4f by Molmil
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-16
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S06
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Crystal Structure of the R253K Mutant of 7,8-Diaminopelargonic Acid Synthase
分子名称: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, SODIUM ION
著者Sandmark, J, Eliot, A.C, Famm, K, Schneider, G, Kirsch, J.F.
登録日2003-12-30
公開日2004-03-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conserved and nonconserved residues in the substrate binding site of 7,8-diaminopelargonic acid synthase from Escherichia coli are essential for catalysis.
Biochemistry, 43, 2004
3L3I
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BU of 3l3i by Molmil
Crystal structure of HLA-B*4402 in complex with the F7A mutant of a self-peptide derived from DPA*0201
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Theodossis, A, Ely, L.K, Rossjohn, J.
登録日2009-12-17
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Constraints within major histocompatibility complex class I restricted peptides: presentation and consequences for T-cell recognition
Proc.Natl.Acad.Sci.USA, 107, 2010
1S70
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BU of 1s70 by Molmil
Complex between protein ser/thr phosphatase-1 (delta) and the myosin phosphatase targeting subunit 1 (MYPT1)
分子名称: 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), MANGANESE (II) ION, Serine/threonine protein phosphatase PP1-beta (or delta) catalytic subunit, ...
著者Kerff, F, Terrak, M, Dominguez, R.
登録日2004-01-28
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of protein phosphatase 1 regulation
Nature, 429, 2004
2FAI
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BU of 2fai by Molmil
Human Estrogen Receptor Alpha Ligand-Binding Domain In Complex With OBCP-2M and A Glucocorticoid Receptor Interacting Protein 1 NR Box II Peptide
分子名称: 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2
著者Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
登録日2005-12-07
公開日2006-05-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006
2BMH
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BU of 2bmh by Molmil
MODELING PROTEIN-SUBSTRATE INTERACTIONS IN THE HEME DOMAIN OF CYTOCHROME P450BM-3
分子名称: CYTOCHROME P450 BM-3, PROTOPORPHYRIN IX CONTAINING FE
著者Li, H, Poulos, T.L.
登録日1994-05-17
公開日1994-07-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Modeling protein-substrate interactions in the heme domain of cytochrome P450(BM-3).
Acta Crystallogr.,Sect.D, 51, 1995
3MK4
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BU of 3mk4 by Molmil
X-Ray structure of human PEX3 in complex with a PEX19 derived peptide
分子名称: Peroxisomal biogenesis factor 19, Peroxisomal biogenesis factor 3
著者Schmidt, F, Treiber, N, Dodt, G, Stehle, T.
登録日2010-04-14
公開日2010-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Insights into peroxisome function from the structure of PEX3 in complex with a soluble fragment of PEX19
J.Biol.Chem., 285, 2010
3MP5
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BU of 3mp5 by Molmil
Crystal Structure of Human Lyase R41M in complex with HMG-CoA
分子名称: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, Hydroxymethylglutaryl-CoA lyase, MAGNESIUM ION
著者Fu, Z, Runquist, J.A, Montgomery, C, Miziorko, H.M, Kim, J.-J.P.
登録日2010-04-24
公開日2010-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Functional insights into human HMG-CoA lyase from structures of Acyl-CoA-containing ternary complexes.
J.Biol.Chem., 285, 2010
2GRV
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BU of 2grv by Molmil
Crystal Structure of LpqW
分子名称: LpqW
著者Marland, Z, Rossjohn, J.
登録日2006-04-25
公開日2006-07-18
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Hijacking of a Substrate-binding Protein Scaffold for use in Mycobacterial Cell Wall Biosynthesis
J.Mol.Biol., 359, 2006
3M5M
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BU of 3m5m by Molmil
Avoiding drug resistance against HCV NS3/4A protease inhibitors
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FDEMEEC Peptide, NS3/4A, ...
著者Schiffer, C.A, Romano, K.P.
登録日2010-03-12
公開日2010-11-24
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Drug resistance against HCV NS3/4A inhibitors is defined by the balance of substrate recognition versus inhibitor binding.
Proc.Natl.Acad.Sci.USA, 107, 2010
1PL5
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Crystal Structure Analysis of the Sir4p C-terminal Coiled Coil
分子名称: Regulatory protein SIR4
著者Murphy, G.A, Spedale, E.J, Powell, S.T, Pillus, L, Schultz, S.C, Chen, L.
登録日2003-06-06
公開日2004-06-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Sir4 C-terminal coiled coil is required for telomeric and mating type silencing in Saccharomyces cerevisiae.
J.Mol.Biol., 334, 2003
3M4V
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Crystal structure of the A330P mutant of cytochrome P450 BM3
分子名称: Bifunctional P-450/NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
著者Yang, W, Whitehouse, C.J.C, Bell, S.G, Bartlam, M, Wong, L.L, Rao, Z.
登録日2010-03-12
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the properties of two single-site proline mutants of CYP102A1 (P450BM3)
Chembiochem, 11, 2010
2ALP
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BU of 2alp by Molmil
REFINED STRUCTURE OF ALPHA-LYTIC PROTEASE AT 1.7 ANGSTROMS RESOLUTION. ANALYSIS OF HYDROGEN BONDING AND SOLVENT STRUCTURE
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION
著者Fujinaga, M, Delbaere, L.T.J, Brayer, G.D, James, M.N.G.
登録日1985-03-07
公開日1985-07-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Refined structure of alpha-lytic protease at 1.7 A resolution. Analysis of hydrogen bonding and solvent structure.
J.Mol.Biol., 184, 1985
2BE5
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Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tagetitoxin
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Vassylyev, D.G, Svetlov, V, Vassylyeva, M.N, Perederina, A, Igarashi, N, Matsugaki, N, Wakatsuki, S, Artsimovitch, I, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-22
公開日2005-11-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for transcription inhibition by tagetitoxin
Nat.Struct.Mol.Biol., 12, 2005
3MGQ
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Binding of Nickel ions to the Nucleosome Core Particle
分子名称: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
著者Mohideen, K, Muhammad, R, Davey, C.A.
登録日2010-04-07
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Perturbations in nucleosome structure from heavy metal association.
Nucleic Acids Res., 38, 2010

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