PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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8UI8	Cryo-EM map of human clamp-clamp loader ATAD5-RFC-two PCNAs complex in intermediate state 3 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UI7	Cryo-EM map of human clmap-clamp loader ATAD5-RFC-gapped PCNA complex in intermediate state 3 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UI9	Cryo-EM map of human clamp-clamp loader ATAD5-RFC-cracked PCNA complex in intermediate state 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
5X5I	The X-ray crystal structure of a TetR family transcription regulator RcdA involved in the regulation of biofilm formation in Escherichia coli 分子名称: HTH-type transcriptional regulator RcdA 著者 Sugino, H, Usui, M, Shimada, T, Nakano, M, Ogasawara, H, Ishihama, A, Hirata, A. 登録日 2017-02-16 公開日 2017-12-27 実験手法 X-RAY DIFFRACTION (2.554 Å) 主引用文献 A structural sketch of RcdA, a transcription factor controlling the master regulator of biofilm formation. FEBS Lett., 591, 2017
4JK1	X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with Guanosine tetraphosphate (ppGpp) 分子名称: Escherichia coli RNA polymerase alpha subunit, Escherichia coli RNA polymerase beta subunit, Escherichia coli RNA polymerase beta' subunit, ... 著者 Murakami, K.S. 登録日 2013-03-09 公開日 2013-04-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Differential regulation by ppGpp versus pppGpp in Escherichia coli. Nucleic Acids Res., 41, 2013
4JK2	X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with guanosine pentaphosphate (pppGpp) 分子名称: Escherichia coli RNA polymerase alpha subunit, Escherichia coli RNA polymerase beta subunit, Escherichia coli RNA polymerase beta' subunit, ... 著者 Murakami, K.S. 登録日 2013-03-09 公開日 2013-04-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4.201 Å) 主引用文献 Differential regulation by ppGpp versus pppGpp in Escherichia coli. Nucleic Acids Res., 41, 2013
5WX9	Crystal Structure of AtERF96 with GCC-box 分子名称: Ethylene-responsive transcription factor ERF096, GCC-box motif 著者 Chen, C.Y, Cheng, Y.S. 登録日 2017-01-06 公開日 2017-11-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box. Plant Mol.Biol., 104, 2020
4LY6	Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family), ... 著者 Sysoeva, T.A, Chowdhury, S, Guo, L, Nixon, B.T. 登録日 2013-07-30 公開日 2013-12-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis. Genes Dev., 27, 2013
8G4W	Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand 分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-mer), ... 著者 Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G. 登録日 2023-02-10 公開日 2023-06-21 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand. Nat.Struct.Mol.Biol., 30, 2023
8G8Z	Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand 分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-MER), ... 著者 Porta, J.C, Ohi, M.D, Walter, N.G, Frank, A.T, Deb, I, Meze, K. 登録日 2023-02-20 公開日 2023-06-21 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand. Nat.Struct.Mol.Biol., 30, 2023
8G7E	Cryo-EM structure of 3DVA component 0 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand 分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-mer), ... 著者 Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G. 登録日 2023-02-16 公開日 2023-06-21 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand. Nat.Struct.Mol.Biol., 30, 2023
4FXE	Crystal structure of the intact E. coli RelBE toxin-antitoxin complex 分子名称: Antitoxin RelB, SULFATE ION, mRNA interferase RelE 著者 Brodersen, D.E, Boggild, A, Sofos, N. 登録日 2012-07-03 公開日 2012-08-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7503 Å) 主引用文献 The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity. Structure, 20, 2012
2GQQ	Crystal Structure of E. coli Leucine-responsive regulatory protein (Lrp) 分子名称: Leucine-responsive regulatory protein 著者 de los Rios, S, Perona, J.J. 登録日 2006-04-21 公開日 2007-03-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of the Escherichia coli Leucine-responsive Regulatory Protein Lrp Reveals a Novel Octameric Assembly. J.Mol.Biol., 366, 2007
8UNJ	Atomic model of the human CTF18-RFC alone in the apo state (State 1) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18 homolog, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-19 公開日 2024-05-08 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC. Proc.Natl.Acad.Sci.USA, 121, 2024
7OUH	Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir 分子名称: Bictegravir, DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), ... 著者 Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N. 登録日 2021-06-11 公開日 2021-08-18 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures. Nat Commun, 12, 2021
5W94	Crystal structure of Scc4 in complex with Scc2n and Ctf19n 分子名称: Ctf19n, MAU2 chromatid cohesion factor homolog, Sister chromatid cohesion protein 2 著者 Hinshaw, S.M, Harrison, S.C. 登録日 2017-06-22 公開日 2017-10-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.193 Å) 主引用文献 The Kinetochore Receptor for the Cohesin Loading Complex. Cell, 171, 2017
6LTH	Structure of human BAF Base module 分子名称: AT-rich interactive domain-containing protein 1A, SWI/SNF complex subunit SMARCC2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, ... 著者 He, S, Wu, Z, Tian, Y, Yu, Z, Yu, J, Wang, X, Li, J, Liu, B, Xu, Y. 登録日 2020-01-22 公開日 2020-02-12 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of nucleosome-bound human BAF complex. Science, 367, 2020
1MK0	catalytic domain of intron endonuclease I-TevI, E75A mutant 分子名称: BETA-MERCAPTOETHANOL, CITRIC ACID, Intron-associated endonuclease 1 著者 Van Roey, P, Meehan, L, Kowalski, J.C, Belfort, M, Derbyshire, V. 登録日 2002-08-28 公開日 2002-10-30 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI. Nat.Struct.Biol., 9, 2002
1G3Y	ARG80ALA DTXR 分子名称: DIPHTHERIA TOXIN REPRESSOR, ZINC ION 著者 Pohl, E, Goranson-Siekierke, J, Holmes, R.K, Hol, W.G.J. 登録日 2000-10-25 公開日 2001-10-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structures of three diphtheria toxin repressor (DtxR) variants with decreased repressor activity. Acta Crystallogr.,Sect.D, 57, 2001
1GZH	Crystal structure of the BRCT domains of human 53BP1 bound to the p53 tumor supressor 分子名称: CELLULAR TUMOR ANTIGEN P53, SULFATE ION, TUMOR SUPPRESSOR P53-BINDING PROTEIN 1, ... 著者 Derbyshire, D.J, Doherty, A.J. 登録日 2002-05-22 公開日 2002-06-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Human 53BP1 Brct Domains Bound to P53 Tumour Suppressor Embo J., 21, 2002
8TNR	Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2 分子名称: 2-[(3S)-2,6-dioxopiperidin-3-yl]-5-(morpholin-4-yl)-1H-isoindole-1,3(2H)-dione, DNA damage-binding protein 1, Maltose/maltodextrin-binding periplasmic protein,SD40, ... 著者 Roy Burman, S.S, Hunkeler, M, Fischer, E.S. 登録日 2023-08-02 公開日 2024-03-13 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Continuous evolution of compact protein degradation tags regulated by selective molecular glues. Science, 383, 2024
4ETS	Crystal structure of Campylobacter jejuni ferric uptake regulator 分子名称: CHLORIDE ION, Ferric uptake regulation protein, ZINC ION 著者 Sarvan, S, Brunzelle, J.B, Couture, J.-F. 登録日 2012-04-24 公開日 2012-06-20 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation. Proc.Natl.Acad.Sci.USA, 109, 2012
1E2X	FadR, fatty acid responsive transcription factor from E. coli 分子名称: FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION 著者 Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J, Wierenga, R.K. 登録日 2000-05-30 公開日 2000-12-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of Fadr, a Fatty Acid-Responsive Transcription Factor with a Novel Acyl Coenzyme A-Binding Fold Embo J., 19, 2000
1FWZ	GLU20ALA DTXR 分子名称: DIPHTHERIA TOXIN REPRESSOR, SULFATE ION, ZINC ION 著者 Pohl, E, Goranson-Siekierke, J, Holmes, R.K, Hol, W.G.J. 登録日 2000-09-25 公開日 2001-09-25 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of three diphtheria toxin repressor (DtxR) variants with decreased repressor activity. Acta Crystallogr.,Sect.D, 57, 2001
1G3T	CYS102SER DTXR 分子名称: DIPHTHERIA TOXIN REPRESSOR 著者 Pohl, E, Goranson-Siekierke, J, Holmes, R.K, Hol, W.G.J. 登録日 2000-10-25 公開日 2001-10-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structures of three diphtheria toxin repressor (DtxR) variants with decreased repressor activity. Acta Crystallogr.,Sect.D, 57, 2001

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