Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5N04
DownloadVisualize
BU of 5n04 by Molmil
X-ray crystal structure of an LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ...
著者Frandsen, K.E.H, Poulsen, J.-C.N, Lo Leggio, L.
登録日2017-02-02
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Unliganded and substrate bound structures of the cellooligosaccharide active lytic polysaccharide monooxygenase LsAA9A at low pH.
Carbohydr. Res., 448, 2017
3T3V
DownloadVisualize
BU of 3t3v by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with Bumped Kinase Inhibitor, RM-1-87
分子名称: 1,2-ETHANEDIOL, 3-(6-methoxynaphthalen-2-yl)-1-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1
著者Larson, E.T, Merritt, E.A.
登録日2011-07-25
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1.
J.Med.Chem., 55, 2012
4DOO
DownloadVisualize
BU of 4doo by Molmil
Crystal structure of Arabidopsis thaliana fatty-acid binding protein At3g63170 (AtFAP1)
分子名称: Chalcone-flavanone isomerase family protein, LAURIC ACID, POTASSIUM ION
著者Noel, J.P, Pojer, F, Louie, G.V, Bowman, M.E.
登録日2012-02-09
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012
5MZY
DownloadVisualize
BU of 5mzy by Molmil
Crystal structure of the decarboxylase AibA/AibB in complex with a possible transition state analog
分子名称: (1~{R},2~{S})-2-methylcyclohexane-1-carboxylic acid, ACETATE ION, GLYCEROL, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
5N2A
DownloadVisualize
BU of 5n2a by Molmil
METHYL-COENZYME M REDUCTASE III FROM METHANOTORRIS FORMICICUS TRIGONAL FORM
分子名称: 1-THIOETHANESULFONIC ACID, BROMIDE ION, Coenzyme B, ...
著者Wagner, T, Wegner, C.E, Ermler, U, Shima, S.
登録日2017-02-07
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales.
J.Bacteriol., 199, 2017
6MAT
DownloadVisualize
BU of 6mat by Molmil
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Rix7 mutant, unknown protein
著者Lo, Y.H, Sobhany, M, Hsu, A.L, Ford, B.L, Krahn, J.M, Borgnia, M.J, Stanley, R.E.
登録日2018-08-28
公開日2019-02-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7.
Nat Commun, 10, 2019
5MZN
DownloadVisualize
BU of 5mzn by Molmil
Helicase Sen1
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Leonaite, B, Basquin, J, Conti, E.
登録日2017-02-01
公開日2017-04-19
最終更新日2017-06-14
実験手法X-RAY DIFFRACTION (1.787 Å)
主引用文献Sen1 has unique structural features grafted on the architecture of the Upf1-like helicase family.
EMBO J., 36, 2017
2Y70
DownloadVisualize
BU of 2y70 by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF GM23, MUTANT G89D, AN EXAMPLE OF CATALYTIC MIGRATION FROM TIM TO THIAMIN PHOSPHATE SYNTHASE.
分子名称: ACETATE ION, SULFATE ION, TRIOSE-PHOSPHATE ISOMERASE
著者Saab-Rincon, G, Olvera, L, Olvera, M, Rudino-Pinera, E, Soberon, X, Morett, E.
登録日2011-01-27
公開日2011-12-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Evolutionary Walk between (Beta/Alpha)(8) Barrels: Catalytic Migration from Triosephosphate Isomerase to Thiamin Phosphate Synthase.
J.Mol.Biol., 416, 2012
7KQ8
DownloadVisualize
BU of 7kq8 by Molmil
Structure of iron bound MEMO1
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者Boniecki, M.T, Uhlemann, E.E, Dmitriev, O.Y.
登録日2020-11-13
公開日2021-11-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献MEMO1 binds iron and modulates iron homeostasis in cancer cells.
Elife, 13, 2024
5N00
DownloadVisualize
BU of 5n00 by Molmil
Crystal structure of the decarboxylase AibA/AibB C56A variant
分子名称: ACETATE ION, Glutaconate CoA-transferase family, subunit A, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
1UEX
DownloadVisualize
BU of 1uex by Molmil
Crystal structure of von Willebrand Factor A1 domain complexed with snake venom bitiscetin
分子名称: bitiscetin alpha chain, bitiscetin beta chain, von Willebrand Factor
著者Maita, N, Nishio, K, Nishimoto, E, Matsui, T, Shikamoto, Y, Morita, T, Sadler, J.E, Mizuno, H.
登録日2003-05-22
公開日2003-09-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of von Willebrand factor A1 domain complexed with snake venom, bitiscetin. Insight into glycoprotein Ibalpha binding mechanism induced by snake venom proteins.
J.Biol.Chem., 278, 2003
5N1T
DownloadVisualize
BU of 5n1t by Molmil
Crystal structure of complex between flavocytochrome c and copper chaperone CopC from T. paradoxus
分子名称: COPPER (II) ION, CopC, Cytochrome C, ...
著者Osipov, E.M, Lilina, A.V, Tikhonova, T.V, Tsallagov, S.I, Popov, V.O.
登録日2017-02-06
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the flavocytochrome c sulfide dehydrogenase associated with the copper-binding protein CopC from the haloalkaliphilic sulfur-oxidizing bacterium Thioalkalivibrio paradoxusARh 1.
Acta Crystallogr D Struct Biol, 74, 2018
5N6F
DownloadVisualize
BU of 5n6f by Molmil
Crystal structure of TGT in complex with guanine fragment
分子名称: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, GUANINE, ...
著者Hassaan, E, Heine, A, Klebe, G.
登録日2017-02-15
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.11909521 Å)
主引用文献Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
6AOK
DownloadVisualize
BU of 6aok by Molmil
Crystal structure of Legionella pneumophila effector Ceg4 with N-terminal TEV protease cleavage sequence
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Ceg4, ...
著者Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Egorova, O, Yim, V, Di Leo, R, Savchenko, A.
登録日2017-08-16
公開日2018-01-10
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献TheLegionella pneumophilaeffector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways.
J. Biol. Chem., 293, 2018
5N5T
DownloadVisualize
BU of 5n5t by Molmil
14-3-3 sigma in complex with TAZ pS89 peptide and fragment NV2
分子名称: 14-3-3 protein sigma, 4-[3,5-bis(chloranyl)pyridin-2-yl]oxyphenol, CHLORIDE ION, ...
著者Sijbesma, E, Leysen, S, Ottmann, C.
登録日2017-02-14
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Identification of Two Secondary Ligand Binding Sites in 14-3-3 Proteins Using Fragment Screening.
Biochemistry, 56, 2017
3T3U
DownloadVisualize
BU of 3t3u by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with Bumped Kinase Inhibitor, RM-1-130
分子名称: 1,2-ETHANEDIOL, 3-(6-methoxynaphthalen-2-yl)-1-(piperidin-4-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1, ...
著者Larson, E.T, Merritt, E.A.
登録日2011-07-25
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1.
J.Med.Chem., 55, 2012
1I7T
DownloadVisualize
BU of 1i7t by Molmil
CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDE P1049-5V
分子名称: 9 RESIDUE PEPTIDE, BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
著者Busslep, J, Zhao, R, Loftus, D, Appella, E, Collins, E.J.
登録日2001-03-10
公開日2001-10-24
最終更新日2021-07-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献T cell activity correlates with oligomeric peptide-major histocompatibility complex binding on T cell surface
J.Biol.Chem., 276, 2001
8ASD
DownloadVisualize
BU of 8asd by Molmil
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*GP*AP*UP*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3'), ...
著者Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
登録日2022-08-19
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
2IO6
DownloadVisualize
BU of 2io6 by Molmil
Wee1 kinase complexed with inhibitor PD330961
分子名称: 9-HYDROXY-6-(3-HYDROXYPROPYL)-4-(2-METHOXYPHENYL)PYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE, Wee1-like protein kinase
著者Squire, C.J, Dickson, J.M, Ivanovic, I, Baker, E.N.
登録日2006-10-10
公開日2007-09-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Synthesis and structure-activity relationships of N-6 substituted analogues of 9-hydroxy-4-phenylpyrrolo[3,4-c]carbazole-1,3(2H,6H)-diones as inhibitors of Wee1 and Chk1 checkpoint kinases.
Eur.J.Med.Chem., 43, 2008
4MZL
DownloadVisualize
BU of 4mzl by Molmil
Crystal Structure of MTIP from Plasmodium falciparum in complex with HBS myoA, a hydrogen bond surrogate myoA helix mimetic
分子名称: Myosin A tail domain interacting protein, hydrogen bond surrogate (HBS) myoA helix mimetic
著者Douse, C.H, Garnett, J.A, Maas, S.J, Cota, E, Tate, E.W.
登録日2013-09-30
公開日2013-11-06
最終更新日2023-06-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal Structures of Stapled and Hydrogen Bond Surrogate Peptides Targeting a Fully Buried Protein-Helix Interaction.
Acs Chem.Biol., 8, 2014
8JHH
DownloadVisualize
BU of 8jhh by Molmil
Glycoside hydrolase family 55 endo-beta-1,3-glucanase from Microdochium nivale
分子名称: GLYCEROL, MnLam55A
著者Ota, T, Saburi, W, Yamashita, K, Tagami, T, Yu, J, Komba, S, Jewell, L.E, Hsiang, T, Imai, R, Yao, M, Mori, H.
登録日2023-05-23
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism for endo-type action of glycoside hydrolase family 55 endo-beta-1,3-glucanase on beta 1-3/1-6-glucan.
J.Biol.Chem., 299, 2023
1G6O
DownloadVisualize
BU of 1g6o by Molmil
CRYSTAL STRUCTURE OF THE HELICOBACTER PYLORI ATPASE, HP0525, IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CAG-ALPHA, DI(HYDROXYETHYL)ETHER
著者Yeo, H.J, Savvides, S.N, Herr, A.B, Lanka, E, Waksman, G, Midwest Center for Structural Genomics (MCSG)
登録日2000-11-07
公開日2001-01-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the hexameric traffic ATPase of the Helicobacter pylori type IV secretion system.
Mol.Cell, 6, 2000
5NKW
DownloadVisualize
BU of 5nkw by Molmil
X-ray crystal structure of an AA9 LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ...
著者Tandrup, T, Frandsen, K.E.H, Poulsen, J.-C.N, Lo Leggio, L.
登録日2017-04-03
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates.
Nat Commun, 8, 2017
8AFR
DownloadVisualize
BU of 8afr by Molmil
Pim1 in complex with 4-((6-hydroxybenzofuran-3-yl)methyl)benzoic acid and Pimtide
分子名称: 4-((6-hydroxybenzofuran-3-yl)methyl)benzoic acid, Pimtide, Serine/threonine-protein kinase pim-1
著者Hochban, P.M.M, Heine, A, Diederich, W.E.
登録日2022-07-18
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Pose, duplicate, then elaborate: Steps towards increased affinity for inhibitors targeting the specificity surface of the Pim-1 kinase.
Eur.J.Med.Chem., 245, 2023
6AWP
DownloadVisualize
BU of 6awp by Molmil
X-ray structure of the ts3 human serotonin transporter complexed with fluvoxamine at the central site
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody FAB heavy chain, 8B6 antibody FAB light chain, ...
著者Coleman, J.A, Gouaux, E.
登録日2017-09-06
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis for recognition of diverse antidepressants by the human serotonin transporter.
Nat. Struct. Mol. Biol., 25, 2018

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon