Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SBP
DownloadVisualize
BU of 6sbp by Molmil
Plant Cysteine Oxidase PCO5 from Arabidopsis thaliana
分子名称: GLYCEROL, NICKEL (II) ION, Plant cysteine oxidase 5
著者White, M.D, Flashman, E, McDonough, M.A.
登録日2019-07-22
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.
Proc.Natl.Acad.Sci.USA, 117, 2020
7KGG
DownloadVisualize
BU of 7kgg by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-I
分子名称: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
8Q9N
DownloadVisualize
BU of 8q9n by Molmil
Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and MITR deacetylase binding motif mutant L151V.
分子名称: DIMETHYL SULFOXIDE, DNA MADS box, MEF2D protein, ...
著者Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
登録日2023-08-20
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
5UE6
DownloadVisualize
BU of 5ue6 by Molmil
Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group I4122
分子名称: COPPER (II) ION, Nitrite reductase, SODIUM ION
著者Hamza, A, Williamson, Z.A, Reed, R.W, Sikora, A.E, Korotkov, K.V.
登録日2016-12-29
公開日2017-02-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA.
Antimicrob. Agents Chemother., 61, 2017
5M83
DownloadVisualize
BU of 5m83 by Molmil
Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpA mRNA 5' cap analog
分子名称: Eukaryotic translation initiation factor 4E, GLYCEROL, [[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanyl-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl hydrogen phosphate
著者Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M.
登録日2016-10-28
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpA mRNA 5' cap analog
To Be Published
3NQU
DownloadVisualize
BU of 3nqu by Molmil
Crystal structure of partially trypsinized (CENP-A/H4)2 heterotetramer
分子名称: Histone H3-like centromeric protein A, Histone H4, SULFATE ION
著者Sekulic, N, Black, B.E.
登録日2010-06-29
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres.
Nature, 467, 2010
2K4F
DownloadVisualize
BU of 2k4f by Molmil
Mouse CD3epsilon Cytoplasmic Tail
分子名称: T-cell surface glycoprotein CD3 epsilon chain
著者Xu, C, Call, M.E, Schwieters, C.D, Schnell, J.R, Gagnon, E.E, Wucherpfennig, K.W, Chou, J.J.
登録日2008-06-07
公開日2008-12-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Regulation of T Cell Receptor Activation by Dynamic Membrane Binding of the CD3varepsilon Cytoplasmic Tyrosine-Based Motif.
Cell(Cambridge,Mass.), 135, 2008
5CGW
DownloadVisualize
BU of 5cgw by Molmil
CRYSTAL STRUCTURE OF Fox-4 cephamycinase mutant Y150F
分子名称: ACETATE ION, Beta-lactamase, ZINC ION
著者Malashkevich, V.N, Toro, R, Lefurgy, S, Almo, S.C.
登録日2015-07-09
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献FOX-4 cephamycinase: an analysis of structure and function.
Antimicrob.Agents Chemother., 2015
4MIK
DownloadVisualize
BU of 4mik by Molmil
Crystal Structure of hPNMT in Complex with bisubstrate inhibitor (2R,3R,4S,5S)-2-(6-amino-9H-purin-9-yl)-5-(((2-(((7-nitro-1,2,3,4-tetrahydroisoquinolin-3-yl)methyl)amino)ethyl)thio)methyl)tetrahydrofuran-3,4-diol
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 9-{5-S-[2-({[(3S)-7-nitro-1,2,3,4-tetrahydroisoquinolin-3-yl]methyl}amino)ethyl]-5-thio-alpha-L-lyxofuranosyl}-9H-purin-6-amine, Phenylethanolamine N-methyltransferase
著者Bart, A.G, Scott, E.E.
登録日2013-08-31
公開日2014-09-10
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.9506 Å)
主引用文献To be published
To be Published
1TZL
DownloadVisualize
BU of 1tzl by Molmil
Crystal Structure of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp.
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, pyranose oxidase
著者Bannwarth, M, Bastian, S, Heckmann-Pohl, D, Giffhorn, F, Schulz, G.E.
登録日2004-07-10
公開日2004-10-19
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of pyranose 2-oxidase from the white-rot fungus peniophora sp.
Biochemistry, 43, 2004
6SD2
DownloadVisualize
BU of 6sd2 by Molmil
Structure of the RBM2inner region of the Salmonella flagella MS-ring protein FliF with 21-fold symmetry applied.
分子名称: Flagellar M-ring protein
著者Johnson, S, Fong, Y.H, Deme, J.C, Furlong, E.J, Kuhlen, L, Lea, S.M.
登録日2019-07-26
公開日2020-03-18
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Symmetry mismatch in the MS-ring of the bacterial flagellar rotor explains the structural coordination of secretion and rotation.
Nat Microbiol, 5, 2020
5MIM
DownloadVisualize
BU of 5mim by Molmil
Xray structure of human furin bound with the 2,5-dideoxystreptamine derived small molecule inhibitor 1n
分子名称: 1-[(1~{R},2~{R},4~{S},5~{S})-2,4-bis(4-carbamimidamidophenoxy)-5-[(4-carbamimidamidophenyl)amino]cyclohexyl]guanidine, CALCIUM ION, CHLORIDE ION, ...
著者Dahms, S.O, Guan-Sheng, J, Than, M.E.
登録日2016-11-28
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Studies Revealed Active Site Distortions of Human Furin by a Small Molecule Inhibitor.
ACS Chem. Biol., 12, 2017
7NF9
DownloadVisualize
BU of 7nf9 by Molmil
N-terminal C2H2 Zn-finger domain of Clamp
分子名称: Chromatin-linked adaptor for MSL proteins, isoform A, ZINC ION
著者Mariasina, S.S, Bonchuk, A.N, Tikhonova, E.A, Efimov, S.V, Maksimenko, O.G, Georgiev, P.G, Polshakov, V.I.
登録日2021-02-05
公開日2021-12-29
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural basis for interaction between CLAMP and MSL2 proteins involved in the specific recruitment of the dosage compensation complex in Drosophila.
Nucleic Acids Res., 50, 2022
7ZPN
DownloadVisualize
BU of 7zpn by Molmil
Crystal Structure of IscR from Dinoroseobacter shibae
分子名称: GLYCEROL, HTH-type transcriptional regulator, SULFATE ION
著者Lukat, P, Ploetzky, L, Blankenfeldt, W, Jahn, D, Haertig, E.
登録日2022-04-28
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Dinoroseobacter shibae IscR homolog acts as a repressor for iron acquisition genes
To Be Published
1FAK
DownloadVisualize
BU of 1fak by Molmil
HUMAN TISSUE FACTOR COMPLEXED WITH COAGULATION FACTOR VIIA INHIBITED WITH A BPTI-MUTANT
分子名称: CALCIUM ION, PROTEIN (5L15), PROTEIN (BLOOD COAGULATION FACTOR VIIA), ...
著者Zhang, E, St Charles, R, Tulinsky, A.
登録日1998-12-28
公開日1999-12-03
最終更新日2023-05-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of extracellular tissue factor complexed with factor VIIa inhibited with a BPTI mutant.
J.Mol.Biol., 285, 1999
2C37
DownloadVisualize
BU of 2c37 by Molmil
RNASE PH CORE OF THE ARCHAEAL EXOSOME IN COMPLEX WITH U8 RNA
分子名称: 5-O-phosphono-beta-D-ribofuranose, CHLORIDE ION, PROBABLE EXOSOME COMPLEX EXONUCLEASE 1, ...
著者Lorentzen, E, Conti, E.
登録日2005-10-04
公開日2005-11-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of 3' End RNA Recognition and Exoribonucleolytic Cleavage by an Exosome Rnase Ph Core.
Mol.Cell, 20, 2005
8PQO
DownloadVisualize
BU of 8pqo by Molmil
PITP in complex with the inhibitor VT01545
分子名称: GLYCEROL, IMIDAZOLE, Inhibitor VT01545, ...
著者Boura, E, Eisenreichova, A.
登録日2023-07-11
公開日2024-05-08
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献PITP in complex with the inhibitor VT01545
To Be Published
1W8S
DownloadVisualize
BU of 1w8s by Molmil
The mechanism of the Schiff Base Forming Fructose-1,6-bisphosphate Aldolase: Structural analysis of reaction intermediates
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I
著者Lorentzen, E, Hensel, R, Siebers, B, Pohl, E.
登録日2004-09-27
公開日2005-03-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of the Schiff base forming fructose-1,6-bisphosphate aldolase: structural analysis of reaction intermediates.
Biochemistry, 44, 2005
6SBS
DownloadVisualize
BU of 6sbs by Molmil
YtrA from Sulfolobus acidocaldarius, a GntR-family transcription factor
分子名称: Regulatory protein
著者Lemmens, L, Valegard, K, Lindas, A.C, Peeters, E, Maes, D.
登録日2019-07-22
公開日2019-07-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献YtrASa, a GntR-Family Transcription Factor, Represses Two Genetic Loci Encoding Membrane Proteins inSulfolobus acidocaldarius.
Front Microbiol, 10, 2019
5MI4
DownloadVisualize
BU of 5mi4 by Molmil
BtGH84 mutant with covalent modification by MA3
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, O-GlcNAcase BT_4395, ...
著者Darby, J.F, Davies, G.J, Hubbard, R.E.
登録日2016-11-27
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Increase of enzyme activity through specific covalent modification with fragments.
Chem Sci, 8, 2017
5MJ3
DownloadVisualize
BU of 5mj3 by Molmil
INTERLEUKIN-23 COMPLEX WITH AN ANTAGONISTIC ALPHABODY, CRYSTAL FORM 1
分子名称: ALPHABODY MA12, Interleukin-12 subunit beta, Interleukin-23 subunit alpha, ...
著者Desmet, J, Verstraete, K, Bloch, Y, Lorent, E, Wen, Y, Devreese, B, Vandenbroucke, K, Loverix, S, Hettmann, T, Deroo, S, Somers, K, Hendrikx, P, Lasters, I, Savvides, S.N.
登録日2016-11-29
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural Basis Of Il-23 Antagonism By An Alphabody Protein Scaffold.
Nat Commun, 5, 2014
6F55
DownloadVisualize
BU of 6f55 by Molmil
Complex structure of PACSIN SH3 domain and TRPV4 proline rich region
分子名称: PACSIN 3, PRR
著者Glogowski, N.A, Goretzki, B, Diehl, E, Duchardt-Ferner, E, Hacker, C, Hellmich, U.A.
登録日2017-11-30
公開日2018-10-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis of TRPV4 N Terminus Interaction with Syndapin/PACSIN1-3 and PIP2.
Structure, 26, 2018
5MMA
DownloadVisualize
BU of 5mma by Molmil
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI XZ379 (compound 5'g)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Maskell, D.P, Pye, V.E, Cherepanov, P.
登録日2016-12-09
公開日2017-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure-Guided Optimization of HIV Integrase Strand Transfer Inhibitors.
J. Med. Chem., 60, 2017
1FJ3
DownloadVisualize
BU of 1fj3 by Molmil
THERMOLYSIN (50% ACETONE SOAKED)
分子名称: ACETONE, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者English, A.C, Groom, C.R, Hubbard, R.E.
登録日2000-08-07
公開日2001-04-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Experimental and computational mapping of the binding surface of a crystalline protein.
Protein Eng., 14, 2001
6SID
DownloadVisualize
BU of 6sid by Molmil
Crystal structure of the C-lobe of drosophila Arc 1 at atomic resolution
分子名称: Activity-regulated cytoskeleton associated protein 1
著者Hallin, E.I, Kursula, P.
登録日2019-08-09
公開日2019-08-28
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal and solution structures reveal oligomerization of individual capsid homology domains of Drosophila Arc.
Plos One, 16, 2021

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon