PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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3J32	An asymmetric unit map from electron cryo-microscopy of Haliotis diversicolor molluscan hemocyanin isoform 1 (HdH1) 分子名称: Hemocyanin isoform 1 著者 Zhang, Q, Dai, X, Cong, Y, Zhang, J, Chen, D.-H, Dougherty, M, Wang, J, Ludtke, S, Schmid, M.F, Chiu, W. 登録日 2013-02-20 公開日 2013-04-17 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Cryo-EM structure of a molluscan hemocyanin suggests its allosteric mechanism. Structure, 21, 2013
3J7R	Structure of the translating mammalian ribosome-Sec61 complex 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Voorhees, R.M, Fernandez, I.S, Scheres, S.H.W, Hegde, R.S. 登録日 2014-08-01 公開日 2014-09-03 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution. Cell(Cambridge,Mass.), 157, 2014
3J6B	Structure of the yeast mitochondrial large ribosomal subunit 分子名称: 21S ribosomal RNA, 54S ribosomal protein IMG1, mitochondrial, ... 著者 Amunts, A, Brown, A, Bai, X.C, Llacer, J.L, Hussain, T, Emsley, P, Long, F, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V. 登録日 2014-01-22 公開日 2014-04-09 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of the yeast mitochondrial large ribosomal subunit. Science, 343, 2014
7AS4	Recombinant human gTuRC 分子名称: Actin, cytoplasmic 1, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Serna, M, Fernandez-Leiro, R, Llorca, O. 登録日 2020-10-26 公開日 2021-01-20 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.13 Å) 主引用文献 Assembly of the asymmetric human gamma-tubulin ring complex by RUVBL1-RUVBL2 AAA ATPase. Sci Adv, 6, 2020
3J2T	An improved model of the human apoptosome 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Apoptotic protease-activating factor 1, Cytochrome c, ... 著者 Yuan, S, Topf, M, Akey, C.W. 登録日 2012-12-23 公開日 2013-04-10 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (9.5 Å) 主引用文献 Changes in apaf-1 conformation that drive apoptosome assembly. Biochemistry, 52, 2013
1WTF	Crystal structure of Bacillus thermoproteolyticus Ferredoxin Variants Containing Unexpected [3Fe-4S] Cluster that is linked to Coenzyme A at 1.6 A Resolution 分子名称: COENZYME A, FE3-S4 CLUSTER, Ferredoxin, ... 著者 Shirakawa, T, Takahashi, Y, Wada, K, Hirota, J, Takao, T, Ohmori, D, Fukuyama, K. 登録日 2004-11-22 公開日 2005-11-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Identification of variant molecules of Bacillus thermoproteolyticus ferredoxin: crystal structure reveals bound coenzyme A and an unexpected [3Fe-4S] cluster associated with a canonical [4Fe-4S] ligand motif Biochemistry, 44, 2005
3J7O	Structure of the mammalian 60S ribosomal subunit 分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Voorhees, R.M, Fernandez, I.S, Scheres, S.H.W, Hegde, R.S. 登録日 2014-08-01 公開日 2014-09-03 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution. Cell(Cambridge,Mass.), 157, 2014
3K5B	Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase 分子名称: V-type ATP synthase subunit E, V-type ATP synthase, subunit (VAPC-THERM) 著者 Lee, L.K, Stewart, A.G, Donohoe, M, Bernal, R.A, Stock, D. 登録日 2009-10-07 公開日 2010-02-23 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The structure of the peripheral stalk of Thermus thermophilus H(+)-ATPase/synthase. Nat.Struct.Mol.Biol., 17, 2010
3J8H	Structure of the rabbit ryanodine receptor RyR1 in complex with FKBP12 at 3.8 Angstrom resolution 分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION 著者 Yan, Z, Bai, X, Yan, C, Wu, J, Scheres, S.H.W, Shi, Y, Yan, N. 登録日 2014-10-26 公開日 2014-12-10 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution. Nature, 517, 2015
3J7Z	Structure of the E. coli 50S subunit with ErmCL nascent chain 分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ... 著者 Arenz, S, Meydan, S, Starosta, A.L, Berninghausen, O, Beckmann, R, Vazquez-Laslop, N, Wilson, D.N. 登録日 2014-08-27 公開日 2014-10-22 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Drug Sensing by the Ribosome Induces Translational Arrest via Active Site Perturbation. Mol.Cell, 56, 2014
3NLC	Crystal structure of the VP0956 protein from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR147 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Uncharacterized protein VP0956 著者 Vorobiev, S, Neely, H, Seetharaman, J, Wang, D, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J, Northeast Structural Genomics Consortium (NESG) 登録日 2010-06-21 公開日 2010-08-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of the VP0956 protein from Vibrio parahaemolyticus. To be Published
1X1Z	Orotidine 5'-monophosphate decarboxylase (odcase) complexed with BMP (produced from 6-cyanoump) 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fujihashi, M, Bello, A.M, Poduch, E, Wei, L, Annedi, S.C, Pai, E.F, Kotra, L.P. 登録日 2005-04-15 公開日 2005-12-06 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 An unprecedented twist to ODCase catalytic activity J.Am.Chem.Soc., 127, 2005
5MJP	Multi-bunch pink beam serial crystallography: Phycocyanin (One chip) 分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN 著者 Meents, A, Oberthuer, D, Lieske, J, Srajer, V, Sarrou, I. 登録日 2016-12-01 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Pink-beam serial crystallography. Nat Commun, 8, 2017
3NON	Crystal Structure of Isocyanide Hydratase from Pseudomonas fluorescens 分子名称: 1,2-ETHANEDIOL, Isocyanide hydratase 著者 Lakshminarasimhan, M, Madzelan, P, Nan, R, Milkovic, N.M, Wilson, M.A. 登録日 2010-06-25 公開日 2010-07-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Evolution of New Enzymatic Function by Structural Modulation of Cysteine Reactivity in Pseudomonas fluorescens Isocyanide Hydratase. J.Biol.Chem., 285, 2010
4QBY	yCP in complex with BOC-ALA-ALA-ALA-CHO 分子名称: BOC-ALA-ALA-ALA-CHO, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... 著者 Arciniega, M, Beck, P, Lange, O, Groll, M, Huber, R. 登録日 2014-05-09 公開日 2014-06-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Differential global structural changes in the core particle of yeast and mouse proteasome induced by ligand binding. Proc.Natl.Acad.Sci.USA, 111, 2014
5MVA	Structure of the thin filament at high calcium concentration 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle 著者 Paul, D.M, Squire, J.M, Morris, E.P. 登録日 2017-01-16 公開日 2017-11-29 実験手法 ELECTRON MICROSCOPY (27.700001 Å) 主引用文献 Relaxed and active thin filament structures; a new structural basis for the regulatory mechanism. J. Struct. Biol., 197, 2017
5MQR	Sialidase BT_1020 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-L-arabinobiosidase, ... 著者 Basle, A, Ndeh, D, Rogowski, A, Cartmell, A, Luis, A.S, Venditto, I, Labourel, A, Gilbert, H.J. 登録日 2016-12-20 公開日 2017-03-22 最終更新日 2017-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Complex pectin metabolism by gut bacteria reveals novel catalytic functions. Nature, 544, 2017
4HUD	Structure of the bacteriophage T4 tail terminator protein, gp15. 分子名称: Tail connector protein Gp15 著者 Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G. 登録日 2012-11-02 公開日 2013-02-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7001 Å) 主引用文献 The molecular architecture of the bacteriophage t4 neck. J.Mol.Biol., 425, 2013
3JCO	Structure of yeast 26S proteasome in M1 state derived from Titan dataset 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. 登録日 2016-01-06 公開日 2016-06-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
5MJJ	Single-shot pink beam serial crystallography: Lysozyme 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Meents, A, Oberthuer, D, Lieske, J, Srajer, V. 登録日 2016-12-01 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.750092 Å) 主引用文献 Single-shot pink beam serial crystallography: Lysozyme To Be Published
5MJM	Single-shot pink beam serial crystallography: Phycocyanin (Five chips merged) 分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN 著者 Meents, A, Oberthuer, D, Lieske, J, Srajer, V, Sarrou, I. 登録日 2016-12-01 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Pink-beam serial crystallography. Nat Commun, 8, 2017
3JA6	Cryo-electron Tomography and All-atom Molecular Dynamics Simulations Reveal a Novel Kinase Conformational Switch in Bacterial Chemotaxis Signaling 分子名称: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein 2 著者 Cassidy, C.K, Himes, B.A, Alvarez, F.J, Ma, J, Zhao, G, Perilla, J.R, Schulten, K, Zhang, P. 登録日 2015-04-21 公開日 2015-12-09 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (12.7 Å) 主引用文献 CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling. Elife, 4, 2015
3KFG	Major mouse urinary protein IV complexed with 2-heptanone 分子名称: (2S)-2-ethylhexan-1-ol, CHLORIDE ION, Major urinary protein 4, ... 著者 Perez-Miller, S, Zou, Q, Hurley, T.D. 登録日 2009-10-27 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 High resolution X-ray structures of mouse major urinary protein nasal isoform in complex with pheromones. Protein Sci., 19, 2010
3O3E	Human Class I MHC HLA-A2 in complex with the Peptidomimetic ELA-2.1 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Borbulevych, O.Y, Baker, B.M. 登録日 2010-07-23 公開日 2010-12-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of HLA-A*0201 complexed with Melan-A/MART-1(26(27L)-35) peptidomimetics reveal conformational heterogeneity and highlight degeneracy of T cell recognition. J.Med.Chem., 53, 2010
3KFF	Major mouse urinary protein IV complexed with 2-sec-butyl-4,5-dihydrothiazole 分子名称: 2-[(1R)-1-methylpropyl]-4,5-dihydro-1,3-thiazole, 2-[(1S)-1-methylpropyl]-4,5-dihydro-1,3-thiazole, CHLORIDE ION, ... 著者 Perez-Miller, S, Zou, Q, Hurley, T.D. 登録日 2009-10-27 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (0.96 Å) 主引用文献 High resolution X-ray structures of mouse major urinary protein nasal isoform in complex with pheromones. Protein Sci., 19, 2010

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