PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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8BE9	Crystal structure of SOS1-HRas-peptidomimetic5 分子名称: CHLORIDE ION, FORMIC ACID, GTPase HRas, ... 著者 Fischer, B, Wohlkonig, A, Steyaert, J. 登録日 2022-10-21 公開日 2023-04-26 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Nanobody Loop Mimetics Enhance Son of Sevenless 1-Catalyzed Nucleotide Exchange on RAS. Angew.Chem.Int.Ed.Engl., 62, 2023
8BEA	Crystal structure of SOS1-HRas-peptidomimetic10 分子名称: GTPase HRas, SOS1-HRas-peptidomimetic10, Son of sevenless homolog 1 著者 Fischer, B, Wohlkonig, A, Steyaert, J. 登録日 2022-10-21 公開日 2023-04-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Nanobody Loop Mimetics Enhance Son of Sevenless 1-Catalyzed Nucleotide Exchange on RAS. Angew.Chem.Int.Ed.Engl., 62, 2023
1KOG	Crystal structure of E. coli threonyl-tRNA synthetase interacting with the essential domain of its mRNA operator 分子名称: 5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE, Threonyl-tRNA synthetase, Threonyl-tRNA synthetase mRNA, ... 著者 Torres-Larrios, A, Dock-Bregeon, A.C, Romby, P, Rees, B, Sankaranarayanan, R, Caillet, J, Springer, M, Ehresmann, C, Ehresmann, B, Moras, D. 登録日 2001-12-20 公開日 2002-04-26 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of translational control by Escherichia coli threonyl tRNA synthetase. Nat.Struct.Biol., 9, 2002
2AN4	Structure of PNMT complexed with S-adenosyl-L-homocysteine and the acceptor substrate octopamine 分子名称: 4-(2R-AMINO-1-HYDROXYETHYL)PHENOL, PHOSPHATE ION, Phenylethanolamine N-methyltransferase, ... 著者 Gee, C.L, Tyndall, J.D.A, Grunewald, G.L, Wu, Q, McLeish, M.J, Martin, J.L. 登録日 2005-08-11 公開日 2006-03-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Mode of binding of methyl acceptor substrates to the adrenaline-synthesizing enzyme phenylethanolamine N-methyltransferase: implications for catalysis Biochemistry, 44, 2005
1KVE	KILLER TOXIN FROM HALOTOLERANT YEAST 分子名称: SMK TOXIN 著者 Kashiwagi, T, Kunishima, N, Suzuki, C, Tsuchiya, F, Nikkuni, S, Arata, Y, Morikawa, K. 登録日 1996-10-04 公開日 1997-04-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin. Structure, 5, 1997
1KNR	L-aspartate oxidase: R386L mutant 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, L-aspartate oxidase, ... 著者 Bossi, R.T, Mattevi, A. 登録日 2001-12-19 公開日 2002-04-17 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of FAD-bound L-aspartate oxidase: insight into substrate specificity and catalysis. Biochemistry, 41, 2002
1KVF	EMP-18 Erythropoietin Receptor Agonist Peptide 分子名称: PROTEIN: EMP-18 Receptor Agonist 著者 Skelton, N.J, Russell, S, de Sauvage, F, Cochran, A.G. 登録日 2002-01-25 公開日 2002-03-06 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Amino acid determinants of beta-hairpin conformation in erythropoeitin receptor agonist peptides derived from a phage display library J.Mol.Biol., 316, 2002
1KW9	Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 2.0A resolution 分子名称: 2,3-Dihydroxybiphenyl dioxygenase, BIPHENYL-2,3-DIOL, FE (II) ION 著者 Sato, N, Uragami, Y, Nishizaki, T, Takahashi, Y, Sazaki, G, Sugimoto, K, Nonaka, T, Masai, E, Fukuda, M, Senda, T. 登録日 2002-01-29 公開日 2003-01-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structures of the Reaction Intermediate and its Homologue of an Extradiol-cleaving Catecholic Dioxygenase J.Mol.Biol., 321, 2002
1KV0	Cis/trans Isomerization of Non-prolyl Peptide Bond Observed in Crystal Structure of an Scorpion Toxin 分子名称: Alpha-like toxin BmK-M7 著者 Guan, R.J, He, X.L, Wang, M, Xiang, Y, Wang, D.C. 登録日 2002-01-23 公開日 2003-09-16 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural mechanism governing cis and trans isomeric states and an intramolecular switch for cis/trans isomerization of a non-proline peptide bond observed in crystal structures of scorpion toxins. J.Mol.Biol., 341, 2004
1KWC	The His145Ala mutant of 2,3-dihydroxybiphenyl dioxygenase in complex with 2,3-dihydroxybiphenyl 分子名称: 2,3-dihydroxybiphenyl dioxygenase, BIPHENYL-2,3-DIOL 著者 Sato, N, Uragami, Y, Nishizaki, T, Takahashi, Y, Sazaki, G, Sugimoto, K, Nonaka, T, Masai, E, Fukuda, M, Senda, T. 登録日 2002-01-29 公開日 2003-01-29 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures of the Reaction Intermediate and its Homologue of an Extradiol-cleaving Catecholic Dioxygenase J.Mol.Biol., 321, 2002
5C2C	GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (unliganded form) 分子名称: CHLORIDE ION, Form II RubisCO, MAGNESIUM ION 著者 Arbing, M.A, Varaljay, V.A, Satagopan, S, Tabita, F.R. 登録日 2015-06-15 公開日 2015-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria. Environ.Microbiol., 18, 2016
1KVD	KILLER TOXIN FROM HALOTOLERANT YEAST 分子名称: SMK TOXIN, SULFATE ION 著者 Kashiwagi, T, Kunishima, N, Suzuki, C, Tsuchiya, F, Nikkuni, S, Arata, Y, Morikawa, K. 登録日 1996-10-04 公開日 1997-04-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin. Structure, 5, 1997
1KW8	Crystal structure of BphC-2,3-dihydroxybiphenyl-NO complex 分子名称: 2,3-Dihydroxybiphenyl dioxygenase, BIPHENYL-2,3-DIOL, FE (II) ION, ... 著者 Sato, N, Uragami, Y, Nishizaki, T, Takahashi, Y, Sazaki, G, Sugimoto, K, Nonaka, T, Masai, E, Fukuda, M, Senda, T. 登録日 2002-01-29 公開日 2003-01-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures of the Reaction Intermediate and its Homologue of an Extradiol-cleaving Catecholic Dioxygenase J.Mol.Biol., 321, 2002
1IW0	Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferric state 分子名称: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... 著者 Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-04-04 公開日 2003-04-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J.Biol.Chem., 279, 2004
1IW1	Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state 分子名称: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... 著者 Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-04-04 公開日 2003-04-04 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J.Biol.Chem., 279, 2004
1J0X	Crystal structure of the rabbit muscle glyceraldehyde-3-phosphate dehydrogenase (GAPDH) 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glyceraldehyde-3-phosphate dehydrogenase 著者 Cowan-Jacob, S.W, Kaufmann, M, Anselmo, A.N, Stark, W, Grutter, M.G. 登録日 2002-11-25 公開日 2003-12-09 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of rabbit-muscle glyceraldehyde-3-phosphate dehydrogenase. Acta Crystallogr.,Sect.D, 59, 2003
1J41	Direct observation of photolysis-induced tertiary structural changes in human haemoglobin; Crystal structure of alpha(Ni)-beta(Fe) hemoglobin (laser photolysed) 分子名称: BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin alpha Chain, ... 著者 Adachi, S, Park, S.-Y, Tame, J.R.H, Shiro, Y, Shibayama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-02-21 公開日 2003-07-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Direct observation of photolysis-induced tertiary structural changes in hemoglobin Proc.Natl.Acad.Sci.USA, 100, 2003
5EUH	Crystal structure of the c-di-GMP-bound GGDEF domain of P. fluorescens GcbC 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Putative GGDEF domain membrane protein, SULFATE ION 著者 Giglio, K.M, Cooley, R.B, Sondermann, H. 登録日 2015-11-18 公開日 2015-12-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.989 Å) 主引用文献 Contribution of Physical Interactions to Signaling Specificity between a Diguanylate Cyclase and Its Effector. Mbio, 6, 2015
1IUJ	The structure of TT1380 protein from thermus thermophilus 分子名称: ZINC ION, hypothetical protein TT1380 著者 Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R.H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-05 公開日 2003-09-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8 Proteins, 55, 2004
1IV5	New Crystal Form of Human CD81 Large Extracellular Loop. 分子名称: CD81 antigen 著者 Kitadokoro, K, Bolognesi, M, Grandi, G, Marco, P, Galli, G, Petracca, R, Fabiana, F. 登録日 2002-03-14 公開日 2003-01-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Subunit Association and Conformational Flexibility in the Head-subdomain of Human CD81 Large Extracellular Loop. Biol.Chem., 383, 2002
2E9C	E. coli undecaprenyl pyrophosphate synthase in complex with BPH-675 分子名称: 1-HYDROXY-2-[3'-(NAPHTHALENE-2-SULFONYLAMINO)-BIPHENYL-3-YL]ETHYLIDENE-1,1-BISPHOSPHONIC ACID, Undecaprenyl pyrophosphate synthetase 著者 Guo, R.T, Ko, T.P, Cao, R, Liang, P.H, Oldfield, E, Wang, A.H.J. 登録日 2007-01-24 公開日 2007-06-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases Proc.Natl.Acad.Sci.Usa, 104, 2007
1KIG	BOVINE FACTOR XA 分子名称: ANTICOAGULANT PEPTIDE, FACTOR XA 著者 Wei, A, Alexander, R, Chang, C.-H. 登録日 1997-04-24 公開日 1998-10-28 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Unexpected binding mode of tick anticoagulant peptide complexed to bovine factor Xa. J.Mol.Biol., 283, 1998
6CN5	HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA LIGAND- BINDING DOMAIN IN COMPLEX WITH INDOLE LIGAND CP9b IN INVERSE AGONIST CONFORMATION 分子名称: 4-cyano-N-{3-[1-(cyclohexanecarbonyl)piperidin-4-yl]-1-methyl-1H-indol-5-yl}pyridine-2-carboxamide, Nuclear receptor ROR-gamma 著者 Kauppi, B, Vajdos, F. 登録日 2018-03-07 公開日 2018-09-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Discovery of 3-Cyano- N-(3-(1-isobutyrylpiperidin-4-yl)-1-methyl-4-(trifluoromethyl)-1 H-pyrrolo[2,3- b]pyridin-5-yl)benzamide: A Potent, Selective, and Orally Bioavailable Retinoic Acid Receptor-Related Orphan Receptor C2 Inverse Agonist. J. Med. Chem., 61, 2018
1L4X	Octameric de novo designed peptide 分子名称: CHLORIDE ION, MAGNESIUM ION, SIN-ASP-GLU-LEU-GLU-ARG-ALA-ILE-ARG-GLU-LEU-ALA-ALA-ARG-ILE-LYS-NH2 著者 Meier, M, Lustig, A, Aebi, U, Burkhard, P. 登録日 2002-03-06 公開日 2002-11-13 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Removing an interhelical salt bridge abolishes coiled-coil formation in a de novo designed peptide J.STRUCT.BIOL., 137, 2002
2E9D	E. coli undecaprenyl pyrophosphate synthase in complex with BPH-676 分子名称: Undecaprenyl pyrophosphate synthetase, [1-HYDROXY-2-(1,1':3',1''-TERPHENYL-3-YLOXY)ETHANE-1,1-DIYL]BIS(PHOSPHONIC ACID) 著者 Guo, R.T, Cao, R, Ko, T.P, Liang, P.H, Oldfield, E, Wang, A.H.J. 登録日 2007-01-24 公開日 2007-06-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases Proc.Natl.Acad.Sci.Usa, 104, 2007

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