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8FKC
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BU of 8fkc by Molmil
Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR33544
分子名称: 1,2-ETHANEDIOL, 2-chloro-N-(5-cyanopyridin-3-yl)-5-nitrobenzamide, Nuclear receptor corepressor 1, ...
著者MacTavish, B.S, Kojetin, D.J.
登録日2022-12-21
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and SR33544
To Be Published
8FKG
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BU of 8fkg by Molmil
Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR33486
分子名称: 1,2-ETHANEDIOL, 2-chloro-N-(5-cyanopyridin-2-yl)-5-nitrobenzamide, GLYCEROL, ...
著者MacTavish, B.S, Kojetin, D.J.
登録日2022-12-21
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and SR33486
To Be Published
8FDV
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BU of 8fdv by Molmil
LSD1-CoREST in complex N-formyl FAD and SNAG peptide
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ...
著者Caroli, J, Mattevi, A.
登録日2022-12-05
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FJ7
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BU of 8fj7 by Molmil
LSD1-CoREST in complex with T108 and SNAG peptide
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ...
著者Caroli, J, Mattevi, A.
登録日2022-12-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FQJ
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BU of 8fqj by Molmil
LSD1-CoREST in complex with T14, short soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2S,3R,4R)-2,3,4-trihydroxy-5-[(1R,3S,3aS,13R)-1-hydroxy-10,11-dimethyl-3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]pentyl dihydrogen diphosphate
著者Caroli, J, Mattevi, A.
登録日2023-01-06
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
To be published
8FJ4
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BU of 8fj4 by Molmil
LSD1-CoREST in complex with T108, short soaking
分子名称: 3-[(1R,2S)-2-(cyclobutylamino)cyclopropyl]-N-phenylbenzamide, Lysine-specific histone demethylase 1A, REST corepressor 1, ...
著者Caroli, J, Mattevi, A.
登録日2022-12-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FJ6
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BU of 8fj6 by Molmil
LSD1-CoREST in complex with T108, long soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[7,8-dimethyl-2,4-dioxo-5-{3-[3-(phenylcarbamoyl)phenyl]propanoyl}-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate
著者Caroli, J, Mattevi, A.
登録日2022-12-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FRV
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BU of 8frv by Molmil
LSD1-CoREST in complex with T17, short soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-[3-(dimethylcarbamoyl)phenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
著者Caroli, J, Mattevi, A.
登録日2023-01-09
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
To be published
8FRQ
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BU of 8frq by Molmil
LSD1-CoREST in complex with T14, long soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(4aS)-7,8-dimethyl-5-(3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}propanoyl)-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
著者Caroli, J, Mattevi, A.
登録日2023-01-08
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FRI
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BU of 8fri by Molmil
LSD1-CoREST in complex with AW4, short soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-2,3,4-trihydroxy-5-[(1R,3S,3aS,13R)-1-hydroxy-10,11-dimethyl-4,6-dioxo-3-([1~1~,2~1~:2~3~,3~1~-terphenyl]-1~4~-yl)-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]pentyl dihydrogen diphosphate (non-preferred name)
著者Caroli, J, Mattevi, A.
登録日2023-01-07
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
To Be Published
8FSK
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BU of 8fsk by Molmil
LSD1-CoREST in complex with T18, short soaking
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-(3-benzamidophenyl)-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
著者Caroli, J, Mattevi, A.
登録日2023-01-10
公開日2024-08-07
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
To Be Published
8HCU
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BU of 8hcu by Molmil
Crystal structure of BCOR/PCGF1/KDM2B complex
分子名称: ACETIC ACID, BCL-6 corepressor, Polycomb group RING finger protein 1, ...
著者Shen, F, Chen, R, Xu, J, Liu, J.
登録日2022-11-03
公開日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of BCOR/PCGF1/KDM2B complex
to be published
1E91
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BU of 1e91 by Molmil
Structure of the complex of the Mad1-Sin3B interaction domains
分子名称: MAD PROTEIN (MAX DIMERIZER), PAIRED AMPHIPATHIC HELIX PROTEIN SIN3B
著者Spronk, C.A.E.M, Tessari, M, Kaan, A.M, Jansen, J.F.A, Vermeulen, M, Stunnenberg, H.G, Vuister, G.W.
登録日2000-10-04
公開日2000-11-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The MAD1-Sin3B Interaction Involves a Novel Helical Fold
Nat.Struct.Biol., 7, 2000
3BRD
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BU of 3brd by Molmil
CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3'), DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3'), ...
著者Wilson, J.J, Kovall, R.A.
登録日2007-12-21
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献RAM-induced Allostery Facilitates Assembly of a Notch Pathway Active Transcription Complex.
J.Biol.Chem., 283, 2008
4O8B
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BU of 4o8b by Molmil
Crystal structure of transcriptional regulator BswR
分子名称: Uncharacterized protein
著者Ye, F.Z, Wang, C, Kumar, V, Zhang, L.H, Gao, Y.G.
登録日2013-12-26
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BswR controls bacterial motility and biofilm formation in Pseudomonas aeruginosa through modulation of the small RNA rsmZ.
Nucleic Acids Res., 42, 2014
4R22
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BU of 4r22 by Molmil
TnrA-DNA complex
分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
著者Schumacher, M.A.
登録日2014-08-08
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R24
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BU of 4r24 by Molmil
Complete dissection of B. subtilis nitrogen homeostatic circuitry
分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
著者Schumacher, M.A.
登録日2014-08-08
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
2CKL
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BU of 2ckl by Molmil
Ring1b-Bmi1 E3 catalytic domain structure
分子名称: IODIDE ION, POLYCOMB GROUP RING FINGER PROTEIN 4, UBIQUITIN LIGASE PROTEIN RING2, ...
著者Buchwald, G, van der Stoop, P, Weichenrieder, O, Perrakis, A, van Lohuizen, M, Sixma, T.K.
登録日2006-04-20
公開日2006-05-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and E3-Ligase Activity of the Ring-Ring Complex of Polycomb Proteins Bmi1 and Ring1B.
Embo J., 25, 2006
4CRV
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BU of 4crv by Molmil
Complex of human CNOT9 and CNOT1 including two tryptophans
分子名称: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG, GLYCEROL, ...
著者Boland, A, Chen, Y, Izaurralde, E, Weichenrieder, O.
登録日2014-03-01
公開日2014-05-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A Ddx6-Cnot1 Complex and W-Binding Pockets in Cnot9 Reveal Direct Links between Mirna Target Recognition and Silencing
Mol.Cell, 54, 2014
4CRU
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BU of 4cru by Molmil
Complex of human CNOT9 and CNOT1 including one tryptophan
分子名称: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG, GLYCEROL
著者Chen, Y, Boland, A, Izaurralde, E, Weichenrieder, O.
登録日2014-03-01
公開日2014-05-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Ddx6-Cnot1 Complex and W-Binding Pockets in Cnot9 Reveal Direct Links between Mirna Target Recognition and Silencing
Mol.Cell, 54, 2014
4CRW
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BU of 4crw by Molmil
Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)
分子名称: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, GLYCEROL, PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
著者Chen, Y, Boland, A, Izaurralde, E, Weichenrieder, O.
登録日2014-03-01
公開日2014-05-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Ddx6-Cnot1 Complex and W-Binding Pockets in Cnot9 Reveal Direct Links between Mirna Target Recognition and Silencing
Mol.Cell, 54, 2014
4DO2
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BU of 4do2 by Molmil
Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution.
分子名称: Regulatory protein rop
著者Amprazi, M, Kapetaniou, E.G, Kokkinidis, M.
登録日2012-02-09
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
1YKE
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BU of 1yke by Molmil
Structure of the mediator MED7/MED21 subcomplex
分子名称: RNA polymerase II holoenzyme component SRB7, RNA polymerase II mediator complex protein MED7
著者Baumli, S, Hoeppner, S, Cramer, P.
登録日2005-01-18
公開日2005-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer.
J.Biol.Chem., 280, 2005
4ERL
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BU of 4erl by Molmil
Crystal structure of the lysine riboswitch bound to a lysine-glycine dipeptide
分子名称: GLYCINE, LYSINE, Lysine riboswitch RNA
著者Garst, A.D, Porter, E, Batey, R.T.
登録日2012-04-20
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into the regulatory landscape of the lysine riboswitch.
J.Mol.Biol., 423, 2012
4ERJ
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BU of 4erj by Molmil
Crystal structure of the lysine riboswitch bound to a 6-aminocaproic acid
分子名称: 6-AMINOHEXANOIC ACID, Lysine riboswitch RNA
著者Garst, A.D, Porter, E, Batey, R.T.
登録日2012-04-20
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into the regulatory landscape of the lysine riboswitch.
J.Mol.Biol., 423, 2012

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件を2024-08-28に公開中

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