Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2XGU
DownloadVisualize
BU of 2xgu by Molmil
Structure of the N-terminal domain of capsid protein from Rabbit Endogenous Lentivirus (RELIK)
分子名称: ACETATE ION, RELIK CAPSID N-TERMINAL DOMAIN
著者Goldstone, D.C, Taylor, I.A, Robertson, L.E, Haire, L.F, Stoye, J.P.
登録日2010-06-07
公開日2010-09-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Structural and Functional Analysis of Prehistoric Lentiviruses Uncovers an Ancient Molecular Interface.
Cell Host Microbe, 8, 2010
5A2Q
DownloadVisualize
BU of 5a2q by Molmil
Structure of the HCV IRES bound to the human ribosome
分子名称: 18S RRNA, HCV IRES, MAGNESIUM ION, ...
著者Quade, N, Leiundgut, M, Boehringer, D, Heuvel, J.v.d, Ban, N.
登録日2015-05-21
公開日2015-07-15
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-Em Structure of Hepatitis C Virus Ires Bound to the Human Ribosome at 3.9 Angstrom Resolution
Nat.Commun., 6, 2015
2XIS
DownloadVisualize
BU of 2xis by Molmil
A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: MAGNESIUM ION, XYLOSE ISOMERASE, Xylitol
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
5VHN
DownloadVisualize
BU of 5vhn by Molmil
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome non-ATPase regulatory subunit 10, 26S proteasome non-ATPase regulatory subunit 2, 26S proteasome regulatory subunit 10B, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-13
公開日2017-08-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
4FM4
DownloadVisualize
BU of 4fm4 by Molmil
Wild Type Fe-type Nitrile Hydratase from Comamonas testosteroni Ni1
分子名称: FE (III) ION, Nitrile hydratase alpha subunit, Nitrile hydratase beta subunit, ...
著者Kuhn, M.L, Martinez, S, Gumataotao, N, Bornscheuer, U, Liu, D, Holz, R.C.
登録日2012-06-15
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.384 Å)
主引用文献The Fe-type nitrile hydratase from Comamonas testosteroni Ni1 does not require an activator accessory protein for expression in Escherichia coli.
Biochem.Biophys.Res.Commun., 424, 2012
4LBQ
DownloadVisualize
BU of 4lbq by Molmil
Crystal structure of mouse galectin-1
分子名称: GLYCEROL, Galectin-1
著者Rustiguel, J.K, Trabuco, A.C, Del Cistia Andrade, C, Stowell, S.R, Cummings, R.D, Dias-Baruffi, M, Nonato, M.C.
登録日2013-06-20
公開日2014-07-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of mouse galectin-1
To be Published
5AA5
DownloadVisualize
BU of 5aa5 by Molmil
Actinobacterial-type NiFe-hydrogenase from Ralstonia eutropha H16 at 2.85 Angstrom resolution
分子名称: IRON/SULFUR CLUSTER, MALONIC ACID, NIFE-HYDROGENASE LARGE SUBUNIT, ...
著者Schaefer, C, Bommer, M, Hennig, S, Jeoung, J.H, Dobbek, H, Lenz, O.
登録日2015-07-23
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Structure of an Actinobacterial-Type [Nife]-Hydrogenase Reveals Insight Into O2-Tolerant H2 Oxidation.
Structure, 24, 2016
5VO8
DownloadVisualize
BU of 5vo8 by Molmil
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter
分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*CP*TP*GP*AP*TP*GP*CP*AP*CP*C)-3'), DNA (5'-D(P*GP*GP*TP*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*AP*AP*AP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Murakami, K.S, Shin, Y, Turnbough Jr, C.L, Molodtsov, V.
登録日2017-05-02
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5US7
DownloadVisualize
BU of 5us7 by Molmil
Human bocavirus 3
分子名称: VP2
著者Mietzsch, M, Agbandje-McKenna, M.
登録日2017-02-13
公開日2017-03-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural Insights into Human Bocaparvoviruses.
J. Virol., 91, 2017
4KZX
DownloadVisualize
BU of 4kzx by Molmil
Rabbit 40S ribosomal subunit in complex with eIF1.
分子名称: 18S ribosomal RNA, 40S Ribosomal protein S9, 40S ribosomal protein RACK1, ...
著者Lomakin, I.B, Steitz, T.A.
登録日2013-05-30
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (7.809 Å)
主引用文献The initiation of mammalian protein synthesis and mRNA scanning mechanism.
Nature, 500, 2013
3DKS
DownloadVisualize
BU of 3dks by Molmil
DsbA substrate complex
分子名称: Thiol:disulfide interchange protein dsbA, siga peptide
著者Paxman, J.J, Borg, N.A, Horne, J, Rossjohn, J, Thompson, P.E, Piek, S, Kahler, C.M, Sakellaris, H, Scanlon, M.J.
登録日2008-06-25
公開日2009-05-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of the bacterial oxidoreductase enzyme DsbA in complex with a peptide reveals a basis for substrate specificity in the catalytic cycle of DsbA enzymes
J.Biol.Chem., 284, 2009
2XWJ
DownloadVisualize
BU of 2xwj by Molmil
Crystal Structure of Complement C3b in Complex with Factor B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COMPLEMENT C3 ALPHA CHAIN, COMPLEMENT C3 BETA CHAIN, ...
著者Forneris, F, Ricklin, D, Wu, J, Tzekou, A, Wallace, R.S, Lambris, J.D, Gros, P.
登録日2010-11-04
公開日2011-01-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structures of C3B in Complex with Factors B and D Give Insight Into Complement Convertase Formation.
Science, 330, 2010
4GKJ
DownloadVisualize
BU of 4gkj by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUG-codon in the A-site and paromomycin.
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, Murphy IV, F.V, Spears, J.L, Demirci, H, Agris, P.F.
登録日2012-08-11
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.298 Å)
主引用文献Expanded use of sense codons is regulated by modified cytidines in tRNA.
Proc.Natl.Acad.Sci.USA, 110, 2013
5A1V
DownloadVisualize
BU of 5a1v by Molmil
The structure of the COPI coat linkage I
分子名称: ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT ALPHA, COATOMER SUBUNIT BETA, ...
著者Dodonova, S.O, Diestelkoetter-Bachert, P, von Appen, A, Hagen, W.J.H, Beck, R, Beck, M, Wieland, F, Briggs, J.A.G.
登録日2015-05-06
公開日2015-07-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (21 Å)
主引用文献Vesicular Transport. A Structure of the Copi Coat and the Role of Coat Proteins in Membrane Vesicle Assembly.
Science, 349, 2015
3DK9
DownloadVisualize
BU of 3dk9 by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Glutathione reductase, SULFATE ION
著者Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
登録日2008-06-24
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
5DL1
DownloadVisualize
BU of 5dl1 by Molmil
ClpP from Staphylococcus aureus in complex with AV145
分子名称: 1-(propan-2-yl)-N-{[2-(thiophen-2-yl)-1,3-oxazol-4-yl]methyl}-1H-pyrazolo[3,4-b]pyridine-5-carboxamide, ATP-dependent Clp protease proteolytic subunit
著者Vielberg, M.-T, Groll, M.
登録日2015-09-04
公開日2015-11-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Reversible Inhibitors Arrest ClpP in a Defined Conformational State that Can Be Revoked by ClpX Association.
Angew.Chem.Int.Ed.Engl., 54, 2015
4GK7
DownloadVisualize
BU of 4gk7 by Molmil
yeast 20S proteasome in complex with the Syringolin-Glidobactin chimera
分子名称: Proteasome component C1, Proteasome component C11, Proteasome component C5, ...
著者Groll, M, Stein, M.L, Bachmann, A.
登録日2012-08-10
公開日2012-08-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Activity enhancement of the synthetic syrbactin proteasome inhibitor hybrid and biological evaluation in tumor cells.
Biochemistry, 51, 2012
5E78
DownloadVisualize
BU of 5e78 by Molmil
Crystal structure of P450 BM3 heme domain variant complexed with Co(III)Sep
分子名称: 1,3,6,8,10,13,16,19-octaazabicyclo[6.6.6]icosane, Bifunctional P-450/NADPH-P450 reductase, CHLORIDE ION, ...
著者Panneerselvm, S, Shehzad, A, Bocola, M, Mueller-Dieckmann, J, Schwaneberg, U.
登録日2015-10-12
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic insights into a cobalt (III) sepulchrate based alternative cofactor system of P450 BM3 monooxygenase.
Biochim. Biophys. Acta, 1866, 2018
4GJR
DownloadVisualize
BU of 4gjr by Molmil
Crystal structure of the TAL effector dHax3 bound to methylated dsDNA
分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*AP*GP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*(5CM)P*TP*AP*(5CM)P*CP*TP*CP*(5CM)P*CP*T)-3'), Hax3
著者Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
登録日2012-08-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of a protein complex
To be Published
4ZWT
DownloadVisualize
BU of 4zwt by Molmil
Crystal Structure of the Bacteriophage T4 recombination mediator protein UvsY, Lattice Type IV
分子名称: Recombination protein uvsY
著者Gajewski, S, White, S.W.
登録日2015-05-19
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structure and mechanism of the phage T4 recombination mediator protein UvsY.
Proc.Natl.Acad.Sci.USA, 113, 2016
2XWB
DownloadVisualize
BU of 2xwb by Molmil
Crystal Structure of Complement C3b in complex with Factors B and D
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COMPLEMENT C3B ALPHA' CHAIN, ...
著者Forneris, F, Ricklin, D, Wu, J, Tzekou, A, Wallace, R.S, Lambris, J.D, Gros, P.
登録日2010-11-01
公開日2011-01-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structures of C3B in Complex with Factors B and D Give Insight Into Complement Convertase Formation.
Science, 330, 2010
4LCE
DownloadVisualize
BU of 4lce by Molmil
CtBP1 in complex with substrate MTOB
分子名称: 4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Hilbert, B.J, Schiffer, C.A, Royer Jr, W.E.
登録日2013-06-21
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structures of human CtBP in complex with substrate MTOB reveal active site features useful for inhibitor design.
Febs Lett., 588, 2014
5VAM
DownloadVisualize
BU of 5vam by Molmil
BRAF in Complex with RAF709
分子名称: N-{2-methyl-5'-(morpholin-4-yl)-6'-[(oxan-4-yl)oxy][3,3'-bipyridin]-5-yl}-3-(trifluoromethyl)benzamide, Serine/threonine-protein kinase B-raf
著者Mamo, M, Appleton, B.A.
登録日2017-03-27
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design and Discovery of N-(2-Methyl-5'-morpholino-6'-((tetrahydro-2H-pyran-4-yl)oxy)-[3,3'-bipyridin]-5-yl)-3-(trifluoromethyl)benzamide (RAF709): A Potent, Selective, and Efficacious RAF Inhibitor Targeting RAS Mutant Cancers.
J. Med. Chem., 60, 2017
4GKK
DownloadVisualize
BU of 4gkk by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUA-codon in the A-site and paromomycin
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, Murphy IV, F.V, Spears, J.L, Demirci, H, Agris, P.F.
登録日2012-08-11
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Expanded use of sense codons is regulated by modified cytidines in tRNA.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GL7
DownloadVisualize
BU of 4gl7 by Molmil
Structure of human placental aromatase complexed with designed inhibitor HDDG046 (compound 5)
分子名称: (6alpha,8alpha)-6-(pent-2-yn-1-yloxy)androsta-1,4-diene-3,17-dione, Cytochrome P450 19A1, PROTOPORPHYRIN IX CONTAINING FE
著者Ghosh, D.
登録日2012-08-13
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Novel aromatase inhibitors by structure-guided design.
J.Med.Chem., 55, 2012

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon