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7KVT
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Crystal structure of Squash RNA aptamer in complex with DFHBI-1T with iridium (III) ions
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
著者Truong, L, Ferre-D'Amare, A.R.
登録日2020-11-28
公開日2022-01-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold.
Nat.Chem.Biol., 18, 2022
7KVU
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Crystal structure of Squash RNA aptamer in complex with DFHBI-1T
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ...
著者Truong, L, Ferre-D'Amare, A.R.
登録日2020-11-28
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold.
Nat.Chem.Biol., 18, 2022
7OLD
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Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
著者Kisonaite, M, Wild, K, Sinning, I.
登録日2021-05-19
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.
Nat Commun, 13, 2022
7OLC
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Thermophilic eukaryotic 80S ribosome at idle POST state
分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
著者Kisonaite, M, Wild, K, Sinning, I.
登録日2021-05-19
公開日2022-01-26
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.
Nat Commun, 13, 2022
7CPU
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Cryo-EM structure of 80S ribosome from mouse kidney
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
著者Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H.
登録日2020-08-08
公開日2022-02-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献A male germ-cell-specific ribosome controls male fertility.
Nature, 612, 2022
7CPV
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Cryo-EM structure of 80S ribosome from mouse testis
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
著者Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H.
登録日2020-08-08
公開日2022-02-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献A male germ-cell-specific ribosome controls male fertility.
Nature, 612, 2022
7QEP
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BU of 7qep by Molmil
Cryo-EM structure of the ribosome from Encephalitozoon cuniculi
分子名称: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ...
著者Nicholson, D, Ranson, N.A, Melnikov, S.V.
登録日2021-12-03
公開日2022-02-09
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Adaptation to genome decay in the structure of the smallest eukaryotic ribosome
Nat Commun, 13, 2022
7PCZ
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Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants
分子名称: ETHANOL, GLYCEROL, Green fluorescent protein
著者Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K.
登録日2021-08-04
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant.
Antioxid.Redox Signal., 37, 2022
7PCA
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Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants
分子名称: ETHANOL, FORMAMIDE, GLYCEROL, ...
著者Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K.
登録日2021-08-03
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant.
Antioxid.Redox Signal., 37, 2022
7PD0
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Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Green fluorescent protein, ...
著者Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K.
登録日2021-08-04
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant.
Antioxid.Redox Signal., 37, 2022
7FBR
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BU of 7fbr by Molmil
Solution structure of The first RNA binding domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-12
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7FBV
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The solution structure of the second RRM domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-13
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7OY6
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BU of 7oy6 by Molmil
Crystal structure of human DYRK1A in complex with ARN25068
分子名称: Dual specificity tyrosine-phosphorylation-regulated kinase 1A, ~{N}4-(3-cyclopropyl-1~{H}-pyrazol-5-yl)-~{N}2-(phenylmethyl)thieno[3,2-d]pyrimidine-2,4-diamine
著者Tripathi, S.K, Balboni, B, Demuro, S, DiMartino, R, Ortega, J, Girotto, S, Cavalli, A.
登録日2021-06-23
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献ARN25068, a versatile starting point towards triple GSK-3 beta /FYN/DYRK1A inhibitors to tackle tau-related neurological disorders.
Eur.J.Med.Chem., 229, 2022
7OY5
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Crystal structure of GSK3Beta in complex with ARN25068
分子名称: CHLORIDE ION, Glycogen synthase kinase-3 beta, ~{N}4-(3-cyclopropyl-1~{H}-pyrazol-5-yl)-~{N}2-(phenylmethyl)thieno[3,2-d]pyrimidine-2,4-diamine
著者Tripathi, S.K, Balboni, B, Demuro, S, DiMartino, R, Giabbai, B, Storici, P, Ortega, J, Girotto, S, Cavalli, A.
登録日2021-06-23
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献ARN25068, a versatile starting point towards triple GSK-3 beta /FYN/DYRK1A inhibitors to tackle tau-related neurological disorders.
Eur.J.Med.Chem., 229, 2022
7APU
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Structure of Adenylate kinase from Escherichia coli in complex with two ADP molecules refined at 1.36 A resolution.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, SODIUM ION
著者Grundstom, C, Wolf-Watz, M, Nam, K, Sauer, U.H.
登録日2020-10-19
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Dynamic Connection between Enzymatic Catalysis and Collective Protein Motions.
Biochemistry, 60, 2021
7RFP
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BU of 7rfp by Molmil
Mouse GITR (mGITR) with DTA-1 Fab fragment
分子名称: DTA-1 (heavy chain), DTA-1 (light chain), Tumor necrosis factor receptor superfamily member 18,Enhanced green fluorescent protein
著者Meyerson, J.R, He, C.
登録日2021-07-14
公開日2022-03-09
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Therapeutic antibody activation of the glucocorticoid-induced TNF receptor by a clustering mechanism.
Sci Adv, 8, 2022
7QGK
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The mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer in its red state
分子名称: MAGNESIUM ION, The red form of the mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer
著者Boyko, K.M, Nikolaeva, A.Y, Gaivoronskii, F.A, Vlaskina, A.V, Subach, O.M, Popov, V.O, Subach, F.V.
登録日2021-12-08
公開日2022-03-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer.
Int J Mol Sci, 23, 2022
7Z01
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BU of 7z01 by Molmil
Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
著者Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
登録日2022-02-21
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
7Z02
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Z-SBTub2M photoswitch bound to tubulin-DARPin D1 complex
分子名称: 6-methyl-2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
登録日2022-02-21
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
7SF9
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Branchiostoma Floridae Violet Fluorescent Protein
分子名称: Violet Fluorescent Protein
著者Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
登録日2021-10-03
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
7WWX
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BU of 7wwx by Molmil
Crystal structure of Herbaspirillum huttiense L-arabinose 1-dehydrogenase (NAD bound form)
分子名称: DI(HYDROXYETHYL)ETHER, NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Matsubara, R, Yoshiwara, K, Watanabe, Y, Watanabe, S.
登録日2022-02-14
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structure of L-arabinose 1-dehydrogenase as a short-chain reductase/dehydrogenase protein.
Biochem.Biophys.Res.Commun., 604, 2022
7SFA
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Branchiostoma floridae fluorescent protein LanFP10A2
分子名称: Fluorescent protein lanFP10A2
著者Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
登録日2021-10-03
公開日2022-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
7SQC
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Ciliary C1 central pair apparatus isolated from Chlamydomonas reinhardtii
分子名称: ADENOSINE-5'-DIPHOSPHATE, CPC1, Calmodulin, ...
著者Gui, M, Wang, X, Dutcher, S.K, Brown, A, Zhang, R.
登録日2021-11-05
公開日2022-04-13
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Ciliary central apparatus structure reveals mechanisms of microtubule patterning.
Nat.Struct.Mol.Biol., 29, 2022
7PWO
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BU of 7pwo by Molmil
Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
分子名称: 40S ribosomal protein S21, 40S ribosomal protein S26, 40S ribosomal protein S30, ...
著者Hiregange, D.G, Rivalta, A, Bose, T, Breiner-Goldstein, E, Samiya, S, Cimicata, G, Kulakova, L, Zimmerman, E, Bashan, A, Herzberg, O, Yonath, A.
登録日2021-10-07
公開日2022-04-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia.
Nucleic Acids Res., 50, 2022
7CAO
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Crystal structure of red chromoprotein from Olindias formosa
分子名称: Chromoprotein
著者Nakashima, R, Zhai, L, Ike, Y, Matsudz, T, Nagai, T.
登録日2020-06-09
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure-based analysis and evolution of a monomerized red-colored chromoprotein from the Olindias formosa jellyfish.
Protein Sci., 31, 2022

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