Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CVW
DownloadVisualize
BU of 8cvw by Molmil
20ns Temperature-Jump (Dark2) XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
5CLY
DownloadVisualize
BU of 5cly by Molmil
X-ray structure of TTR mutant - S52P at 1.23A resolution
分子名称: GLYCEROL, Transthyretin
著者Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
登録日2015-07-16
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献X-ray structure of TTR mutant - S52P at 1.23A resolution
To Be Published
8CWF
DownloadVisualize
BU of 8cwf by Molmil
200us Temperature-Jump (Light) XFEL structure of Lysozyme Bound to N,N'-diacetylchitobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-19
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
8CW5
DownloadVisualize
BU of 8cw5 by Molmil
200us Temperature-Jump (Light) XFEL structure of Lysozyme
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-18
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
8CWC
DownloadVisualize
BU of 8cwc by Molmil
20ns Temperature-Jump (Light) XFEL structure of Lysozyme Bound to N,N'-diacetylchitobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
著者Wolff, A.M, Thompson, M.C, Fraser, J.S, Nango, E.
登録日2022-05-19
公開日2022-06-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography.
Nat.Chem., 15, 2023
7ARG
DownloadVisualize
BU of 7arg by Molmil
Notum in complex with ARUK3002704
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-10-24
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Structural Insights into Notum Covalent Inhibition.
J.Med.Chem., 64, 2021
8UQX
DownloadVisualize
BU of 8uqx by Molmil
Round 18 Arylesterase Variant of Apo-Phosphotriesterase Measured at 9.5 keV
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Phosphotriesterase variant PTE-R18
著者Breeze, C.W, Frkic, R.L, Campbell, E.C, Jackson, C.J.
登録日2023-10-25
公開日2024-04-03
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Mononuclear binding and catalytic activity of europium(III) and gadolinium(III) at the active site of the model metalloenzyme phosphotriesterase.
Acta Crystallogr D Struct Biol, 80, 2024
6POG
DownloadVisualize
BU of 6pog by Molmil
Crystal structure of the NELL2 EGF1-6-Robo3 FN1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Wang, J, Pak, J.S, Ozkan, E.
登録日2019-07-03
公開日2020-05-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.755 Å)
主引用文献NELL2-Robo3 complex structure reveals mechanisms of receptor activation for axon guidance.
Nat Commun, 11, 2020
8UUH
DownloadVisualize
BU of 8uuh by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12199
分子名称: 5-[2-(dimethylamino)ethoxy]-2-methyl-N-[(1R)-1-{(3M,5P)-3-(1-methyl-1H-pyrazol-4-yl)-5-[1-(propan-2-yl)-1H-pyrazol-4-yl]phenyl}ethyl]benzamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
登録日2023-11-01
公開日2024-04-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
7SO8
DownloadVisualize
BU of 7so8 by Molmil
Crystal structure of Glutathione S-Transferase from Shrimp Litopenaeus vannamei in complex with silver ions and a molecules of Glutathione binding in G-site and H-site
分子名称: GLUTATHIONE, Glutathione transferase, PENTAETHYLENE GLYCOL, ...
著者Escudero-Garcia, A, Rudino-Pinera, E, Miranda-Blancas, R.
登録日2021-10-29
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Inhibition of GST class Mu of the shrimp Litopenaeus vannamei by binding silver ions in H-site.
To Be Published
8V0I
DownloadVisualize
BU of 8v0i by Molmil
The structure of the native cardiac thin filament troponin core in Ca2+-bound fully activated state 2 from the lower strand
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Galkin, V.E, Risi, C.M.
登録日2023-11-17
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Troponin Structural Dynamics in the Native Cardiac Thin Filament Revealed by Cryo Electron Microscopy.
J.Mol.Biol., 436, 2024
2I5S
DownloadVisualize
BU of 2i5s by Molmil
Crystal structure of onconase with bound nucleic acid
分子名称: 5'-D(*A*(DU)P*GP*A)-3', P-30 protein
著者Bae, E, Lee, J.E, Raines, R.T, Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-08-25
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for catalysis by onconase.
J.Mol.Biol., 375, 2008
6PR1
DownloadVisualize
BU of 6pr1 by Molmil
R260A/S128A S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-07-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
6PRG
DownloadVisualize
BU of 6prg by Molmil
SBP RafE in complex with stachyose
分子名称: 1,2-ETHANEDIOL, ABC transporter sugar-binding protein, CITRIC ACID, ...
著者Meier, E.P.W, Boraston, A.B.
登録日2019-07-10
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system.
J.Biol.Chem., 294, 2019
8UWY
DownloadVisualize
BU of 8uwy by Molmil
The structure of the native cardiac thin filament troponin core in Ca2+-free rotated state from the upper strand
分子名称: Actin, alpha cardiac muscle 1, Tropomyosin alpha-1 chain, ...
著者Galkin, V.E, Risi, C.M.
登録日2023-11-08
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Troponin Structural Dynamics in the Native Cardiac Thin Filament Revealed by Cryo Electron Microscopy.
J.Mol.Biol., 436, 2024
3NUE
DownloadVisualize
BU of 3nue by Molmil
The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase from mycobacterium tuberculosis complexed with tryptophan
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Parker, E.J, Jameson, G.B, Jiao, W, Webby, C.J, Baker, E.N, Baker, H.M.
登録日2010-07-06
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synergistic allostery, a sophisticated regulatory network for the control of aromatic amino acid biosynthesis in Mycobacterium tuberculosis
J.Biol.Chem., 285, 2010
3O61
DownloadVisualize
BU of 3o61 by Molmil
Structure of the E100A E.coli GDP-mannose hydrolase (yffh) in complex with GDP-mannose and Mg++
分子名称: CHLORIDE ION, GDP-mannose pyrophosphatase nudK, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, ...
著者Amzel, L.M, Gabelli, S.B, Boto, A.N.
登録日2010-07-28
公開日2011-05-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural studies of the Nudix GDP-mannose hydrolase from E. coli reveals a new motif for mannose recognition.
Proteins, 79, 2011
8UQW
DownloadVisualize
BU of 8uqw by Molmil
Round 18 Arylesterase Variant of Apo-Phosphotriesterase Measured at 13 keV
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Phosphotriesterase variant PTE-R18
著者Breeze, C.W, Frkic, R.L, Campbell, E.C, Jackson, C.J.
登録日2023-10-25
公開日2024-04-03
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mononuclear binding and catalytic activity of europium(III) and gadolinium(III) at the active site of the model metalloenzyme phosphotriesterase.
Acta Crystallogr D Struct Biol, 80, 2024
6PQ8
DownloadVisualize
BU of 6pq8 by Molmil
Crystal structure of TLA-1 S70G extended spectrum Beta-lactamase in complex with clavulanic acid
分子名称: (2R,3Z,5R)-3-(2-HYDROXYETHYLIDENE)-7-OXO-4-OXA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, ACETATE ION, ASPARTIC ACID, ...
著者Rudino-Pinera, E, Cifuentes-Castro, V.H, Rodriguez-Almazan, C.
登録日2019-07-08
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of ESBL TLA-1 in complex with clavulanic acid reveals a second acylation site.
Biochem.Biophys.Res.Commun., 522, 2020
8UZU
DownloadVisualize
BU of 8uzu by Molmil
Crystal structure of Shewanella benthica Group 1 truncated hemoglobin L80A C51S C71S variant
分子名称: CYANIDE ION, Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Schultz, T.D, Martinez, J.E, Siegler, M.A, Schlessman, J.L, Lecomte, J.T.J.
登録日2023-11-16
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Shewanella benthica Group 1 truncated hemoglobin L80A C51S C71S variant
To Be Published
5UN1
DownloadVisualize
BU of 5un1 by Molmil
Crystal structure of GluN1/GluN2B delta-ATD NMDA receptor
分子名称: (5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annulene, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Song, X, Gouaux, E.
登録日2017-01-30
公開日2018-02-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Mechanism of NMDA receptor channel block by MK-801 and memantine.
Nature, 556, 2018
2VTP
DownloadVisualize
BU of 2vtp by Molmil
Identification of N-(4-piperidinyl)-4-(2,6-dichlorobenzoylamino)-1H- pyrazole-3-carboxamide (AT7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
分子名称: CELL DIVISION PROTEIN KINASE 2, {[(2,6-difluorophenyl)carbonyl]amino}-N-(4-fluorophenyl)-1H-pyrazole-3-carboxamide
著者Wyatt, P.G, Woodhead, A.J, Boulstridge, J.A, Berdini, V, Carr, M.G, Cross, D.M, Danillon, D, Davis, D.J, Devine, L.A, Early, T.R, Feltell, R.E, Lewis, E.J, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Reule, M, Saxty, G, Seavers, L.C.A, Smith, D, Squires, M.S, Trewartha, G, Walker, M.T, Woolford, A.J.
登録日2008-05-15
公開日2008-08-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Identification of N-(4-Piperidinyl)-4-(2,6-Dichlorobenzoylamino)-1H-Pyrazole-3-Carboxamide (at7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
J.Med.Chem., 51, 2008
8UOB
DownloadVisualize
BU of 8uob by Molmil
SARS-CoV-2 Papain-like protease (PLpro) with Inhibitor Jun12682
分子名称: 5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(1-ethyl-1H-pyrazol-3-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-2-methylbenzamide, CHLORIDE ION, Papain-like protease nsp3, ...
著者Ansari, A, Tan, B, Ruiz, F.X, Wang, J, Arnold, E.
登録日2023-10-19
公開日2024-04-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UQY
DownloadVisualize
BU of 8uqy by Molmil
Round 18 Arylesterase Variant of Phosphotriesterase Bound to Europium(III) Measured at 9.5 keV
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, EUROPIUM (III) ION, ...
著者Breeze, C.W, Frkic, R.L, Campbell, E.C, Jackson, C.J.
登録日2023-10-25
公開日2024-04-03
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Mononuclear binding and catalytic activity of europium(III) and gadolinium(III) at the active site of the model metalloenzyme phosphotriesterase.
Acta Crystallogr D Struct Biol, 80, 2024
6PR3
DownloadVisualize
BU of 6pr3 by Molmil
D262A/S128A S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-07-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon