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7JJO
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Structural Basis of the Activation of Heterotrimeric Gs-protein by Isoproterenol-bound Beta1-Adrenergic Receptor
分子名称: Beta1-Adrenergic Receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Su, M, Zhu, L, Zhang, Y, Paknejad, N, Dey, R, Huang, J, Lee, M.Y, Williams, D, Jordan, K.D, Eng, E.T, Ernst, O.P, Meyerson, J.R, Hite, R.K, Walz, T, Liu, W, Huang, X.Y.
登録日2020-07-27
公開日2020-09-02
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural Basis of the Activation of Heterotrimeric Gs-Protein by Isoproterenol-Bound beta 1 -Adrenergic Receptor.
Mol.Cell, 80, 2020
7JH4
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Crystal structure of NAD(P)H-flavin oxidoreductase (NfoR) from S. aureus complexed with reduced FMN and NAD+
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, NAD(P)H-dependent oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Zheng, Y, O'Neill, A.G, Beaupre, B.A, Liu, D, Moran, G.R.
登録日2020-07-20
公開日2020-09-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献NfoR: Chromate Reductase or Flavin Mononucleotide Reductase?
Appl.Environ.Microbiol., 86, 2020
8HPA
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Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in a DNA binding form
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*AP*TP*GP*GP*TP*AP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*CP*G)-3'), DNA polymerase, ...
著者Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
登録日2022-12-12
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structure of DNA replication machinery from human monkeypox virus
To Be Published
7JG1
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Dimeric Immunoglobin A (dIgA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
著者Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
登録日2020-07-18
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
7JFL
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Crystal structure of human phosphorylated IRF-3 bound to CBP
分子名称: CREB-binding protein, Interferon regulatory factor 3
著者Li, P, Jing, T, Zhao, B.
登録日2020-07-17
公開日2020-09-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献The Structural Basis of IRF-3 Activation upon Phosphorylation.
J Immunol., 205, 2020
7JG2
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Secretory Immunoglobin A (SIgA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
著者Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
登録日2020-07-18
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
6SO1
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Fragment N13569a in complex with MAP kinase p38-alpha
分子名称: 1-(1,3-benzodioxol-5-yl)-~{N}-[[(2~{R})-oxolan-2-yl]methyl]methanamine, CHLORIDE ION, MAGNESIUM ION, ...
著者Nichols, C.E, De Nicola, G.F.
登録日2019-08-28
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
6SOI
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Fragment N13788a in complex with MAP kinase p38-alpha
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
著者Nichols, C.E, De Nicola, G.F.
登録日2019-08-29
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
6SOT
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Fragment N11290a in complex with MAP kinase p38-alpha
分子名称: 1,2-ETHANEDIOL, 1-(4-methylphenyl)pyrrolidine-2,5-dione, CHLORIDE ION, ...
著者Nichols, C.E, De Nicola, G.F.
登録日2019-08-29
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
7KRK
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Putative FabG from Acinetobacter baumannii
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, GLYCEROL
著者Shaw, K.I, Smith, K.M, Cross, E.M.
登録日2020-11-20
公開日2020-12-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Putative FabG from Acinetobacter baumannii
To Be Published
7KOV
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BU of 7kov by Molmil
Crystal structure of Azotobacter vinelandii 3-mercaptopropionic acid dioxygenase in complex with thiocyanate
分子名称: CHLORIDE ION, Cysteine dioxygenase type I protein, FE (III) ION, ...
著者Kiser, P.D.
登録日2020-11-10
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure of 3-mercaptopropionic acid dioxygenase with a substrate analog reveals bidentate substrate binding at the iron center.
J.Biol.Chem., 296, 2021
8I3P
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crystal structure of yeast cytosine deaminase mutant yCD-RQ-1/8SAH in complex with (R)-4-hydroxy-3,4-dihydropyrimidin-2(1H)-one
分子名称: 1,2-ETHANEDIOL, 4-oxidanyl-3,4-dihydro-1H-pyrimidin-2-one, Cytosine deaminase, ...
著者Qin, M.M, Deng, H.Z, Yao, L.S.
登録日2023-01-17
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献crystal structure of yeast cytosine deaminase mutant yCD-RQ-1/8SAH in complex with (R)-4-hydroxy-3,4-dihydropyrimidin-2(1H)-one
To be published
8I3O
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crystal structure of yeast cytosine deaminase mutant yCD-RQ-1/8SAH
分子名称: Cytosine deaminase, MANGANESE (II) ION
著者Qin, M.M, Yao, L.S, Deng, H.Z.
登録日2023-01-17
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献crystal structure of yeast cytosine deaminase mutant yCD-RQ-1/8SAH
To be published
8IMS
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BU of 8ims by Molmil
Crystal structure of TRAF7 coiled-coil domain
分子名称: E3 ubiquitin-protein ligase TRAF7
著者Hu, R, Lin, L, Lu, Q.
登録日2023-03-07
公開日2024-01-24
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structure of TRAF7 coiled-coil trimer provides insight into its function in zebrafish embryonic development.
J Mol Cell Biol, 2024
8I3N
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crystal structure of yeast cytosine deaminase mutant yCD-RQ
分子名称: Cytosine deaminase, ZINC ION
著者Qin, M.M, Yao, L.S, Deng, H.Z.
登録日2023-01-17
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献The crystal structure of rational designed yCD mutant yCD-RQ
To be published
6SO4
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Fragment RZ132 in complex with MAP kinase p38-alpha
分子名称: (2~{S})-2-methyl-4-(oxetan-3-yl)-~{N}-(phenylmethyl)piperazine-2-carboxamide, CHLORIDE ION, MAGNESIUM ION, ...
著者Nichols, C.E, De Nicola, G.F.
登録日2019-08-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
8HWP
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Crystal Structure of Mutant GDSL Esterase of Photobacterium sp. J15 S12A in Complex with Butyrate
分子名称: GDSL-family esterase, butanoic acid
著者Rahman, N.N.A, Leow, T.C, Jonet, M.A.
登録日2023-01-02
公開日2023-06-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal Structure of Mutant GDSL Esterase of Photobacterium sp. J15 in Complex with Butyrate
To Be Published
3BE0
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BU of 3be0 by Molmil
The Role of Asn 242 in P450cin
分子名称: 1,3,3-TRIMETHYL-2-OXABICYCLO[2.2.2]OCTANE, P450cin, PROTOPORPHYRIN IX CONTAINING FE
著者Meharenna, Y.T, Poulos, T.L.
登録日2007-11-15
公開日2008-02-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献The critical role of substrate-protein hydrogen bonding in the control of regioselective hydroxylation in p450cin
J.Biol.Chem., 283, 2008
8I7L
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Crystal structure of indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with a novel inhibitor
分子名称: 1-[3-[(4-chloranyl-2-fluoranyl-phenyl)carbamoylamino]-4-[cyclohexyl(2-methylpropyl)amino]phenyl]pyrrole-2-carboxylic acid, Indoleamine 2,3-dioxygenase 1, THIOSULFATE
著者Li, K, Liu, W, Dong, X.
登録日2023-02-01
公開日2023-02-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Apo-Form Selective Inhibition of IDO for Tumor Immunotherapy.
J Immunol., 209, 2022
8I3Z
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Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, RNA (31-MER), RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3'), ...
著者Peng, X, Lilley, D.M.J, Huang, L.
登録日2023-01-18
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8I1C
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Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 9.1
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, GLYCEROL, SODIUM ION
著者Nakamura, T, Yamagata, Y.
登録日2023-01-13
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Protonation states of Asp residues in the human Nudix hydrolase MTH1 contribute to its broad substrate recognition.
Febs Lett., 597, 2023
8I1A
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Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 8.6
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, SODIUM ION
著者Nakamura, T, Yamagata, Y.
登録日2023-01-13
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Protonation states of Asp residues in the human Nudix hydrolase MTH1 contribute to its broad substrate recognition.
Febs Lett., 597, 2023
8I1I
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Crystal structure of human MTH1(G2K/D120N mutant) in complex with 2-oxo-dATP at pH 7.7
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, SODIUM ION, [[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Nakamura, T, Yamagata, Y.
登録日2023-01-13
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Protonation states of Asp residues in the human Nudix hydrolase MTH1 contribute to its broad substrate recognition.
Febs Lett., 597, 2023
7JPL
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Rabbit Cav1.1 in the presence of 10 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.4 Angstrom resolution
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, CALCIUM ION, ...
著者Yan, N, Gao, S.
登録日2020-08-09
公開日2020-11-18
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7JPW
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Rabbit Cav1.1 in the presence of 100 micromolar (R)-(+)-Bay K8644 in nanodiscs at 3.2 Angstrom resolution
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, CALCIUM ION, ...
著者Yan, N, Gao, S.
登録日2020-08-10
公開日2020-11-18
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021

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件を2024-07-10に公開中

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