PDB: 1573 件ウェブページステータス検索Chemie searchBIRD

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5GOI	Lys48-linked di-ubiquitin 分子名称: D-ubiquitin, Ubiquitin 著者 Gao, S, Pan, M, Zheng, Y, Liu, L. 登録日 2016-07-27 公開日 2016-11-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.594 Å) 主引用文献 Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
3OJ3	Crystal structure of the A20 ZnF4 and ubiquitin complex 分子名称: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION 著者 Bosanac, I, Hymowitz, S.G. 登録日 2010-08-20 公開日 2010-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling Mol.Cell, 40, 2010
3RUL	New strategy to analyze structures of glycopeptide-target complexes 分子名称: 10-METHYLUNDECANOIC ACID, 2-amino-2-deoxy-beta-D-glucopyranuronic acid, CHLORIDE ION, ... 著者 Economou, N.J, Nahoum, V, Weeks, S.D, Grasty, K.C, Loll, P.J. 登録日 2011-05-05 公開日 2012-06-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A carrier protein strategy yields the structure of dalbavancin. J.Am.Chem.Soc., 134, 2012
4HJK	U7Ub7 Disulfide variant 分子名称: PHOSPHATE ION, Ubiquitin 著者 Murray, J.M, Rouge, L. 登録日 2012-10-12 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.784 Å) 主引用文献 Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization to be published
4I6N	Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl ester 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, METHYL 4-AMINOBUTANOATE, SODIUM ION, ... 著者 Morrow, M.E, Ronau, J.A, White, R.R, Artavanis-Tsakonas, K, Das, C. 登録日 2012-11-29 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C-Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity. Biochemistry, 52, 2013
7M4O	Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, E3 ubiquitin-protein ligase RNF216, GLYCEROL, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
7M4M	Crystal structure of RBR E3 ligase RNF216 with ubiquitin 分子名称: E3 ubiquitin-protein ligase RNF216, GLYCEROL, Ubiquitin, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
7M4N	Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin 分子名称: E3 ubiquitin-protein ligase RNF216, GLYCEROL, SULFATE ION, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
7NBB	Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Lange, S.M, Kulathu, Y. 登録日 2021-01-26 公開日 2022-08-10 最終更新日 2024-07-31 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains. Nat.Struct.Mol.Biol., 2024
7BU0	Crystal structure of a OTU deubiquitinase in complex with Ub-PA 分子名称: Polyubiquitin-B, Uncharacterized protein, prop-2-en-1-amine 著者 Ouyang, S.Y, Zhen, X.K. 登録日 2020-04-03 公開日 2020-11-18 最終更新日 2023-04-05 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Interplay between bacterial deubiquitinase and ubiquitin E3 ligase regulates ubiquitin dynamics on Legionella phagosomes. Elife, 9, 2020
4K7W	Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
4K7S	Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
4K7U	Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
4IG7	Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester 分子名称: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin C-terminal hydrolase 37 著者 Das, C, Kim, M.I, Morrow, M.E. 登録日 2012-12-16 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.996 Å) 主引用文献 Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C‑Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity. Biochemistry, 52, 2013
1WX9	Solution Structure of the N-terminal Ubiquitin-like Domain in the Human BAT3 Protein 分子名称: HLA-B associated transcript-3 isoform b 著者 Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-01-20 公開日 2005-07-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the N-terminal Ubiquitin-like Domain in the Human BAT3 Protein To be Published
1WE6	Solution structure of Ubiquitin-like domain in splicing factor AAL91182 分子名称: splicing factor, putative 著者 He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-24 公開日 2004-11-24 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of Ubiquitin-like domain in splicing factor AAL91182 To be Published
1WIA	Solution structure of mouse hypothetical ubiquitin-like protein BAB25500 分子名称: hypothetical ubiquitin-like protein (RIKEN cDNA 2010008E23) 著者 Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Hayashi, F, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-28 公開日 2004-11-28 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of mouse hypothetical ubiquitin-like protein BAB25500 To be Published
1WXV	Solution structure of the ubiquitin domain of BCL-2 binding athanogene-1 分子名称: BAG-family molecular chaperone regulator-1 著者 Niraula, T.N, Muto, Y, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-02-02 公開日 2005-08-02 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the ubiquitin domain of BCL-2 binding athanogene-1 To be Published
1WGD	Solution structure of the Ubl-domain of Herp 分子名称: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein 著者 Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-28 公開日 2004-11-28 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the Ubl-domain of Herp To be Published
1X1M	Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132 分子名称: Ubiquitin-like protein SB132 著者 Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-04-07 公開日 2005-10-07 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132 To be Published
1WR1	The complex structure of Dsk2p UBA with ubiquitin 分子名称: Ubiquitin, Ubiquitin-like protein DSK2 著者 Ohno, A, Jee, J.G, Fujiwara, K, Tenno, T, Goda, N, Tochio, H, Hiroaki, H, kobayashi, H, Shirakawa, M. 登録日 2004-10-08 公開日 2005-04-19 最終更新日 2023-09-27 実験手法 SOLUTION NMR 主引用文献 Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition. Structure, 13, 2005
1WX8	Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein 分子名称: RIKEN cDNA 4931431F19 著者 Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-01-20 公開日 2005-07-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein To be Published
1WE7	Solution structure of Ubiquitin-like domain in SF3a120 分子名称: Sf3a1 protein 著者 He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-24 公開日 2004-11-24 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of Ubiquitin-like domain in SF3a120 To be Published
1WH3	Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL) 分子名称: 59 kDa 2'-5'-oligoadenylate synthetase like protein 著者 Tochio, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-28 公開日 2004-11-28 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL) To be Published
1WX7	Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3) 分子名称: Ubiquilin 3 著者 Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-01-20 公開日 2005-07-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3) To be Published

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