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6WQD
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The 1.95 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS-CoV-2
分子名称: 1,2-ETHANEDIOL, Non-structural protein 7, Non-structural protein 8
著者Kim, Y, Wilamowski, M, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-28
公開日2020-05-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Transient and stabilized complexes of Nsp7, Nsp8, and Nsp12 in SARS-CoV-2 replication.
Biophys.J., 120, 2021
6XIP
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The 1.5 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS CoV-2
分子名称: 1,2-ETHANEDIOL, Non-structural protein 7, Non-structural protein 8
著者Wilamowski, M, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-06-20
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Transient and stabilized complexes of Nsp7, Nsp8, and Nsp12 in SARS-CoV-2 replication.
Biophys.J., 120, 2021
6VAG
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Crystal structure of the oligomerization domain of phosphoprotein from parainfluenza virus 5
分子名称: GLYCEROL, Phosphoprotein
著者Aggarwal, M, Abdella, R, He, Y, Lamb, R.A.
登録日2019-12-17
公開日2020-02-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.
Proc.Natl.Acad.Sci.USA, 117, 2020
1ESH
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THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA
分子名称: RNA (5'-R(*GP*GP*UP*GP*CP*AP*UP*AP*GP*CP*AP*CP*C)-3')
著者Kim, C.-H, Kao, C.C, Tinoco Jr, I.
登録日2000-04-10
公開日2000-04-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献RNA motifs that determine specificity between a viral replicase and its promoter.
Nat.Struct.Biol., 7, 2000
5UJ2
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Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU
分子名称: (1S)-1-(4-aminoimidazo[2,1-f][1,2,4]triazin-7-yl)-1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-2-methyl-D-ribitol, CHLORIDE ION, Genome polyprotein, ...
著者Edwards, T.E, Fox III, D, Appleby, T.C, Murakami, E, Rey, A, McGrath, M.E.
登録日2017-01-16
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of a 2'-fluoro-2'-C-methyl C-nucleotide HCV polymerase inhibitor and a phosphoramidate prodrug with favorable properties.
Bioorg. Med. Chem. Lett., 27, 2017
8TL8
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Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant in complex with bile acid
分子名称: GLYCOCHOLIC ACID, Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L, Neetu, N.
登録日2023-07-26
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TL1
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Structure of Orthoreovirus RNA Chaperone SigmaNS N17
分子名称: GLYCOCHOLIC ACID, Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L.
登録日2023-07-26
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TKA
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Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant
分子名称: Protein sigma-NS
著者Prasad, B.V.V, Zhao, B, Hu, L.
登録日2023-07-25
公開日2024-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
5OIY
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Structure of the HMPV P oligomerization domain at 2.2 A
分子名称: Phosphoprotein
著者Renner, M, Paesen, G.C, Grison, C.M, Granier, S, Grimes, J.M, Leyrat, C.
登録日2017-07-19
公開日2017-11-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural dissection of human metapneumovirus phosphoprotein using small angle x-ray scattering.
Sci Rep, 7, 2017
5OIX
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Structure of the HMPV P oligomerization domain at 1.6 A
分子名称: GLYCEROL, Phosphoprotein
著者Renner, M, Paesen, G.C, Grison, C.M, Granier, S, Grimes, J.M, Leyrat, C.
登録日2017-07-19
公開日2017-11-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural dissection of human metapneumovirus phosphoprotein using small angle x-ray scattering.
Sci Rep, 7, 2017
2P40
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Crystal Structure of Dengue Methyltransferase in Complex with 7MeGpppG
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, SULFATE ION, type II methyltransferase
著者Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2007-03-11
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
6MVP
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HCV NS5B 1b N316 bound to Compound 18
分子名称: (4-{[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl](methylsulfonyl)amino}phenyl)boronic acid, Genome polyprotein
著者Williams, S.P, Kahler, K, Price, D.J, Peat, A.J.
登録日2018-10-26
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design of N-Benzoxaborole Benzofuran GSK8175-Optimization of Human Pharmacokinetics Inspired by Metabolites of a Failed Clinical HCV Inhibitor.
J.Med.Chem., 62, 2019
8GW1
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A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
分子名称: Helicase, MANGANESE (II) ION, Non-structural protein 7, ...
著者Yan, L, Rao, Z, Lou, Z.
登録日2022-09-16
公開日2023-10-25
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
2CSE
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BU of 2cse by Molmil
Features of Reovirus Outer-Capsid Protein mu1 Revealed by Electron and Image Reconstruction of the virion at 7.0-A Resolution
分子名称: Minor core protein lambda 3, Sigma 2 protein, guanylyltransferase, ...
著者Zhang, X, Ji, Y, Zhang, L, Harrison, S.C, Marinescu, D.C, Nibert, M.L, Baker, T.S.
登録日2005-05-21
公開日2005-10-18
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution.
Structure, 13, 2005
1T6O
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Nucleocapsid-binding domain of the measles virus P protein (amino acids 457-507) in complex with amino acids 486-505 of the measles virus N protein
分子名称: linker, phosphoprotein
著者Kingston, R.L, Hamel, D.J, Gay, L.S, Dahlquist, F.W, Matthews, B.W.
登録日2004-05-06
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the attachment of a paramyxoviral polymerase to its template.
Proc.Natl.Acad.Sci.USA, 101, 2004
1JO7
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Solution Structure of Influenza A Virus Promoter
分子名称: Influenza A virus promoter RNA
著者Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S.
登録日2001-07-27
公開日2001-09-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
2P3L
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Crystal Structure of Dengue Methyltransferase in Complex with GpppA and S-Adenosyl-L-Homocysteine
分子名称: CITRIC ACID, GLYCEROL, GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, ...
著者Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2007-03-09
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
2P3O
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Crystal Structure of Dengue Methyltransferase in Complex with 7MeGpppA and S-Adenosyl-L-homocysteine
分子名称: CITRIC ACID, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2007-03-09
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.756 Å)
主引用文献Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
2P41
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Crystal Structure of Dengue Methyltransferase in Complex with 7MeGpppG2'OMe and S-Adenosyl-L-homocysteine
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-GUANOSINE, CITRIC ACID, GLYCEROL, ...
著者Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2007-03-11
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
2P3Q
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Crystal Structure of Dengue Methyltransferase in Complex with GpppG and S-Adenosyl-L-homocysteine
分子名称: DIGUANOSINE-5'-TRIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2007-03-09
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
5FVD
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Human metapneumovirus N0-P complex
分子名称: CHLORIDE ION, NUCLEOCAPSID, PHOSPHOPROTEIN
著者Renner, M, Bertinelli, M, Leyrat, C, Paesen, G.C, Saraiva de Oliveira, L.F, Huiskonen, J.T, Grimes, J.M.
登録日2016-02-05
公開日2016-02-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Nucleocapsid assembly in pneumoviruses is regulated by conformational switching of the N protein.
Elife, 5, 2016
3UDL
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3-heterocyclyl quinolone bound to HCV NS5B
分子名称: 3-(5-benzyl-1,2,4-oxadiazol-3-yl)-6-fluoro-1-[2-fluoro-4-(trifluoromethyl)benzyl]-7-(4-methylpiperazin-1-yl)quinolin-4(1H)-one, HCV NS5B polymerase
著者Somoza, J.R.
登録日2011-10-28
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.174 Å)
主引用文献Quinolones as HCV NS5B polymerase inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
5FJ5
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Structure of the in vitro assembled bacteriophage phi6 polymerase complex
分子名称: MAJOR INNER PROTEIN P1
著者Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
登録日2015-10-06
公開日2015-11-04
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
6EUW
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Crystal structure of the cap-binding domain of the PB2 subunit of influenza A/H5N1 polymerase bound to an azaindazole inhibitor
分子名称: (2~{S},3~{S})-3-[[5-fluoranyl-2-(5-fluoranyl-1~{H}-pyrazolo[3,4-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid, GLYCEROL, Polymerase basic protein 2
著者Cusack, S, Gaudon, S.
登録日2017-10-31
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Capped RNA primer binding to influenza polymerase and implications for the mechanism of cap-binding inhibitors.
Nucleic Acids Res., 46, 2018
4P9A
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X-ray Crystal Structure of PA protein from Influenza strain H7N9
分子名称: GLYCEROL, Polymerase PA
著者Fairman, J.W, Moen, S.O, Clifton, M.C, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-04-02
公開日2014-07-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1999 Å)
主引用文献Structural analysis of H1N1 and H7N9 influenza A virus PA in the absence of PB1.
Sci Rep, 4, 2014

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