PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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4XPC	Crystal structure of 5'- CTTATAAATTTATAAG in a host-guest complex 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*TP*TP*AP*TP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*AP*TP*AP*AP*G)-3'), ... 著者 Georgiadis, M.M, Singh, I. 登録日 2015-01-16 公開日 2015-05-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural basis for a six nucleotide genetic alphabet. J. Am. Chem. Soc., 137, 2015
4XPE	Crystal structure of 5'-CTTATGGGCCCATAAG in a host-guest complex 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*TP*TP*AP*TP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*AP*TP*AP*AP*G)-3'), ... 著者 Georgiadis, M.M, Singh, I. 登録日 2015-01-16 公開日 2015-05-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structural basis for a six nucleotide genetic alphabet. J. Am. Chem. Soc., 137, 2015
4FMN	Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer bound to a fragment of NTG2 分子名称: 1,2-ETHANEDIOL, DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, ... 著者 Gueneau, E, Legrand, P, Charbonnier, J.B. 登録日 2012-06-18 公開日 2013-02-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structure of the MutL alpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site. Nat.Struct.Mol.Biol., 20, 2013
4YM5	Crystal structure of the human nucleosome containing 6-4PP (inside) 分子名称: 144 mer-DNA, 144-mer DNA, Histone H2A type 1-B/E, ... 著者 Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H. 登録日 2015-03-06 公開日 2015-12-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (4.005 Å) 主引用文献 Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome Sci Rep, 5, 2015
2W57	Crystal structure of the Vibrio cholerae ferric uptake regulator (Fur) reveals structural rearrangement of the DNA-binding domains 分子名称: FERRIC UPTAKE REGULATION PROTEIN, ZINC ION 著者 Sheikh, M.A, Taylor, G.L. 登録日 2008-12-05 公開日 2009-01-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of the Vibrio Cholerae Ferric Uptake Regulator (Fur) Reveals Insights Into Metal Co-Ordination. Mol.Microbiol., 72, 2009
7BM2	Crystal structure of the DNA-binding protein RemA from Geobacillus thermodenitrificans 分子名称: Putative regulatory protein GTNG_1019, SULFATE ION 著者 Altegoer, F, Mrusek, D, Bange, G. 登録日 2021-01-19 公開日 2021-08-25 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structural and functional characterization of the bacterial biofilm activator RemA. Nat Commun, 12, 2021
8VCJ	CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 7:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA, MAGNESIUM ION, ... 著者 Shen, Y, Guarne, A. 登録日 2023-12-14 公開日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3.32 Å) 主引用文献 Assembly of the Tn7 targeting complex by a regulated stepwise process. Mol.Cell, 84, 2024
4GS3	Dimeric structure of the N-terminal domain of PriB protein from Thermoanaerobacter tencongensis solved ab initio 分子名称: Single-stranded DNA-binding protein 著者 Liebschner, D, Brzezinski, K, Dauter, M, Dauter, Z, Nowak, M, Kur, J, Olszewski, M. 登録日 2012-08-27 公開日 2012-09-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.09 Å) 主引用文献 Dimeric structure of the N-terminal domain of PriB protein from Thermoanaerobacter tengcongensis solved ab initio. Acta Crystallogr.,Sect.D, 68, 2012
5HOO	Crystal structure of the Mos1 Strand Transfer Complex 分子名称: MAGNESIUM ION, Mariner Mos1 transposase, Mos1 IR DNA NTS, ... 著者 Richardson, J.M, Morris, E.R. 登録日 2016-01-19 公開日 2016-06-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 A bend, flip and trap mechanism for transposon integration. Elife, 5, 2016
7LMA	Tetrahymena telomerase T3D2 structure at 3.3 Angstrom 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Wang, Y, Liu, B, Helmling, C, Susac, L, Cheng, R, Zhou, Z.H, Feigon, J. 登録日 2021-02-05 公開日 2021-05-12 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structures of telomerase at several steps of telomere repeat synthesis. Nature, 593, 2021
7LMB	Tetrahymena telomerase T5D5 structure at 3.8 Angstrom 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Wang, Y, Liu, B, Helmling, C, Susac, L, Cheng, R, Zhou, Z.H, Feigon, J. 登録日 2021-02-05 公開日 2021-05-12 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structures of telomerase at several steps of telomere repeat synthesis. Nature, 593, 2021
6ZX9	Crystal structure of SIV Vpr,fused to T4 lysozyme, isolated from moustached monkey, bound to human DDB1 and human DCAF1 (amino acid residues 1046-1396) 分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, GLYCEROL, ... 著者 Schwefel, D, Banchenko, S. 登録日 2020-07-29 公開日 2021-07-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.519729 Å) 主引用文献 Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses. Plos Pathog., 17, 2021
5IWM	2.5A structure of GSK945237 with S.aureus DNA gyrase and DNA. 分子名称: (1R)-1-[(4-{[(6,7-dihydro[1,4]dioxino[2,3-c]pyridazin-3-yl)methyl]amino}piperidin-1-yl)methyl]-9-fluoro-1,2-dihydro-4H-pyrrolo[3,2,1-ij]quinolin-4-one, DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*TP*TP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*GP*GP*TP*GP*AP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'), ... 著者 Bax, B.D, Miles, T.J. 登録日 2016-03-22 公開日 2016-05-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Novel tricyclics (e.g., GSK945237) as potent inhibitors of bacterial type IIA topoisomerases. Bioorg.Med.Chem.Lett., 26, 2016
8W0E	Cryo-EM structure of a human MCM2-7 single hexamer on dsDNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (25-MER), ... 著者 Hunker, O, Yang, R, Bleichert, F. 登録日 2024-02-13 公開日 2024-10-02 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Multiple pathways for licensing human replication origins To Be Published
8W0F	Cryo-EM structure of a human MCM2-7 double hexamer on dsDNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (47-MER), ... 著者 Hunker, O, Yang, R, Bleichert, F. 登録日 2024-02-13 公開日 2024-10-02 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Multiple pathways for licensing human replication origins To Be Published
5ZBA	Crystal structure of Rtt109-Asf1-H3-H4-CoA complex 分子名称: COENZYME A, DNA damage response protein Rtt109, putative, ... 著者 Zhang, L, Serra-Cardona, A, Zhou, H, Wang, M, Yang, N, Zhang, Z, Xu, R.M. 登録日 2018-02-10 公開日 2018-07-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109. Cell, 174, 2018
1I6H	RNA POLYMERASE II ELONGATION COMPLEX 分子名称: 5'-D(P*AP*AP*AP*TP*GP*CP*CP*TP*GP*GP*TP*CP*T)-3', 5'-R(P*GP*AP*CP*CP*AP*GP*GP*CP*A)-3', DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, ... 著者 Gnatt, A.L, Cramer, P, Kornberg, R.D. 登録日 2001-03-02 公開日 2001-04-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution. Science, 292, 2001
5ZBB	Crystal structure of Rtt109-Asf1-H3-H4 complex 分子名称: DI(HYDROXYETHYL)ETHER, DNA damage response protein Rtt109, putative, ... 著者 Zhang, L, Serra-Cardona, A, Zhou, H, Wang, M, Yang, N, Zhang, Z, Xu, R.M. 登録日 2018-02-10 公開日 2018-07-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109. Cell, 174, 2018
1PVR	BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE 分子名称: 34-MER, Recombinase CRE 著者 Baldwin, E.P, Martin, S.S, Abel, J, Gelato, K.A, Kim, H, Schultz, P.G, Santoro, S.W. 登録日 2003-06-28 公開日 2004-02-17 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water. Chem.Biol., 10, 2003
1PVP	BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 分子名称: 34-MER, Recombinase cre 著者 Baldwin, E.P, Martin, S.S, Abel, J, Gelato, K.A, Kim, H, Schultz, P.G, Santoro, S.W. 登録日 2003-06-28 公開日 2004-02-17 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water. Chem.Biol., 10, 2003
1MYK	CRYSTAL STRUCTURE, FOLDING, AND OPERATOR BINDING OF THE HYPERSTABLE ARC REPRESSOR MUTANT PL8 分子名称: ARC REPRESSOR 著者 Schildbach, J.F, Milla, M.E, Jeffrey, P.D, Raumann, B.E, Sauer, R.T. 登録日 1994-10-12 公開日 1995-01-26 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure, folding, and operator binding of the hyperstable Arc repressor mutant PL8. Biochemistry, 34, 1995
2BJ8	NIKR IN CLOSED CONFORMATION AND NICKEL BOUND TO HIGH and LOW-AFFINITY SITES 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Tahirov, T.H. 登録日 2005-01-31 公開日 2005-04-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition J.Mol.Biol., 348, 2005
1EYF	REFINED STRUCTURE OF THE DNA METHYL PHOSPHOTRIESTER REPAIR DOMAIN OF E. COLI ADA 分子名称: ADA REGULATORY PROTEIN, ZINC ION 著者 Lin, Y, Dotsch, V, Wintner, T, Peariso, K, Myers, L.C, Penner-Hahn, J.E, Verdine, G.L, Wagner, G. 登録日 2000-05-06 公開日 2003-09-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural basis for the functional switch of the E. coli Ada protein Biochemistry, 40, 2001
6URS	Sleeping Beauty transposase PAI subdomain mutant - H19Y 分子名称: Sleeping Beauty transposase PAI subdomain 著者 Nesmelova, I.V, Leighton, G.O, Yan, C, Lustig, J, Corona, R.I, Guo, J.T, Ivics, Z. 登録日 2019-10-24 公開日 2020-10-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 H19Y mutation in the primary DNA-recognition subdomain of the Sleeping Beauty transposase improves structural stability, transposon DNA-binding and transposition To Be Published
2BJ7	NIKR IN CLOSED CONFORMATION AND NICKEL BOUND TO HIGH-AFFINITY SITES 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NICKEL (II) ION, ... 著者 Tahirov, T.H. 登録日 2005-01-31 公開日 2005-04-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition J.Mol.Biol., 348, 2005

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