Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JWK
DownloadVisualize
BU of 5jwk by Molmil
Factor Inhibiting HIF D201E in Complex with Fe, and Alpha-Ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者Taabazuing, C.Y, Garman, S.C, Knapp, M.J, Eron, S.
登録日2016-05-12
公開日2017-05-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Factor Inhibiting HIF D201E in Complex with Fe, and Alpha-Ketoglutarate
To Be Published
5KER
DownloadVisualize
BU of 5ker by Molmil
Deer mouse recombinant hemoglobin from high altitude species
分子名称: Alpha-globin, Beta globin, PROTOPORPHYRIN IX CONTAINING FE
著者Inoguchi, N, Natarajan, C, Storz, J.F, Moriyama, H.
登録日2016-06-10
公開日2017-04-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Alteration of the alpha 1 beta 2/ alpha 2 beta 1 subunit interface contributes to the increased hemoglobin-oxygen affinity of high-altitude deer mice.
PLoS ONE, 12, 2017
1KD1
DownloadVisualize
BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-12
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1KQ9
DownloadVisualize
BU of 1kq9 by Molmil
Human methionine aminopeptidase type II in complex with L-methionine
分子名称: METHIONINE, Methionine aminopeptidase 2, TERTIARY-BUTYL ALCOHOL, ...
著者Nonato, M.C, Widom, J, Clardy, J.
登録日2002-01-04
公開日2003-12-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Human methionine aminopeptidase type 2 in complex with L- and D-methionine
Bioorg.Med.Chem.Lett., 16, 2006
1KKH
DownloadVisualize
BU of 1kkh by Molmil
Crystal Structure of the Methanococcus jannaschii Mevalonate Kinase
分子名称: 1,4-DIETHYLENE DIOXIDE, Mevalonate Kinase
著者Yang, D, Shipman, L.W, Roessner, C.A, Scott, A.I, Sacchettini, J.C.
登録日2001-12-08
公開日2002-03-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Methanococcus jannaschii mevalonate kinase, a member of the GHMP kinase superfamily.
J.Biol.Chem., 277, 2002
1KM2
DownloadVisualize
BU of 1km2 by Molmil
crystal structure of orotidine monophosphate mutant Q185A with 6-azaUMP
分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
著者Wu, N, Gillon, W, Pai, E.F.
登録日2001-12-13
公開日2002-06-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mapping the active site-ligand interactions of orotidine 5'-monophosphate decarboxylase by crystallography.
Biochemistry, 41, 2002
5K36
DownloadVisualize
BU of 5k36 by Molmil
Structure of an eleven component nuclear RNA exosome complex bound to RNA
分子名称: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ...
著者Lima, C.D, Zinder, J.C.
登録日2016-05-19
公開日2016-11-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Nuclear RNA Exosome at 3.1 angstrom Reveals Substrate Specificities, RNA Paths, and Allosteric Inhibition of Rrp44/Dis3.
Mol.Cell, 64, 2016
1KW2
DownloadVisualize
BU of 1kw2 by Molmil
CRYSTAL STRUCTURE OF UNCOMPLEXED VITAMIN D-BINDING PROTEIN
分子名称: Vitamin D-binding protein
著者Otterbein, L.R, Dominguez, R.
登録日2002-01-28
公開日2002-06-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of the vitamin D-binding protein and its complex with actin: structural basis of the actin-scavenger system.
Proc.Natl.Acad.Sci.USA, 99, 2002
1UOZ
DownloadVisualize
BU of 1uoz by Molmil
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom
分子名称: 4-thio-beta-D-glucopyranose, GLYCEROL, PUTATIVE CELLULASE, ...
著者Varrot, A, Leydier, S, Pell, G, Gilbert, H.J, Davies, G.J.
登録日2003-09-26
公開日2004-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Mycobacterium Tuberculosis Strains Possess Functional Cellulases.
J.Biol.Chem., 280, 2005
1RWZ
DownloadVisualize
BU of 1rwz by Molmil
Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) from A. fulgidus
分子名称: DNA polymerase sliding clamp
著者Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
登録日2003-12-17
公開日2004-01-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004
5J8A
DownloadVisualize
BU of 5j8a by Molmil
Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ...
著者Cocozaki, A, Ferguson, A.
登録日2016-04-07
公開日2016-07-06
最終更新日2016-08-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors.
Proc.Natl.Acad.Sci.USA, 113, 2016
1K8U
DownloadVisualize
BU of 1k8u by Molmil
CRYSTAL STRUCTURE OF CALCIUM-FREE (OR APO) HUMAN S100A6; CYS3MET MUTANT (SELENOMETHIONINE DERIVATIVE)
分子名称: S100A6
著者Otterbein, L.R, Dominguez, R.
登録日2001-10-25
公開日2002-04-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structures of S100A6 in the Ca(2+)-free and Ca(2+)-bound states: the calcium sensor mechanism of S100 proteins revealed at atomic resolution.
Structure, 10, 2002
1S1Y
DownloadVisualize
BU of 1s1y by Molmil
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 microseconds to 3 milliseconds
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
登録日2004-01-07
公開日2004-06-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
1K3V
DownloadVisualize
BU of 1k3v by Molmil
Porcine Parvovirus Capsid
分子名称: capsid protein VP2
著者Simpson, A.A, Hebert, B, Sullivan, G.M, Parrish, C.R, Zadori, Z, Tijssen, P, Rossmann, M.G.
登録日2001-10-04
公開日2001-10-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The structure of porcine parvovirus: comparison with related viruses.
J.Mol.Biol., 315, 2002
5JIY
DownloadVisualize
BU of 5jiy by Molmil
Structure of G9a SET-domain with Histone H3K9norLeucine mutant peptide and bound S-adenosylmethionine
分子名称: Histone H3.1 mutant peptide with H3K9nor-leucine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
著者Jayaram, H, Bellon, S.F, Poy, F.
登録日2016-04-22
公開日2016-09-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献S-adenosyl methionine is necessary for inhibition of the methyltransferase G9a by the lysine 9 to methionine mutation on histone H3.
Proc.Natl.Acad.Sci.USA, 113, 2016
1S3G
DownloadVisualize
BU of 1s3g by Molmil
Crystal structure of adenylate kinase from Bacillus globisporus
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
著者Bae, E, Phillips Jr, G.N.
登録日2004-01-13
公開日2004-05-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structures and analysis of highly homologous psychrophilic, mesophilic, and thermophilic adenylate kinases.
J.Biol.Chem., 279, 2004
1K73
DownloadVisualize
BU of 1k73 by Molmil
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
分子名称: 23S RRNA, 5S RRNA, ANISOMYCIN, ...
著者Hansen, J, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-10-18
公開日2003-07-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
1S5N
DownloadVisualize
BU of 1s5n by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
分子名称: HYDROXIDE ION, MANGANESE (II) ION, SODIUM ION, ...
著者Fenn, T.D, Ringe, D, Petsko, G.A.
登録日2004-01-21
公開日2004-02-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
1K90
DownloadVisualize
BU of 1k90 by Molmil
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin and 3' deoxy-ATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CALMODULIN, ...
著者Drum, C.L, Yan, S.-Z, Bard, J, Shen, Y.-Q, Lu, D, Soelaiman, S, Grabarek, Z, Bohm, A, Tang, W.-J.
登録日2001-10-26
公開日2002-01-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin.
Nature, 415, 2002
1K3C
DownloadVisualize
BU of 1k3c by Molmil
Phosphoenolpyruvate carboxykinase in complex with ADP, AlF3 and Pyruvate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
著者Sudom, A.M, Prasad, L, Goldie, H, Delbaere, L.T.J.
登録日2001-10-02
公開日2001-12-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The phosphoryl-transfer mechanism of Escherichia coli phosphoenolpyruvate carboxykinase from the use of AlF(3).
J.Mol.Biol., 314, 2001
1SF5
DownloadVisualize
BU of 1sf5 by Molmil
Structure of oxidized state of the P94A mutant of amicyanin
分子名称: Amicyanin, COPPER (II) ION
著者Carrell, C.J, Sun, D, Jiang, S, Davidson, V.L, Mathews, F.S.
登録日2004-02-19
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Studies of Two Mutants of Amicyanin from Paracoccus denitrificans That Stabilize the Reduced State of the Copper.
Biochemistry, 43, 2004
1SFD
DownloadVisualize
BU of 1sfd by Molmil
oxidized form of amicyanin mutant P94F
分子名称: Amicyanin, COPPER (II) ION, SULFATE ION
著者Carrell, C.J, Sun, D, Jiang, S, Davidson, V.L, Mathews, F.S.
登録日2004-02-19
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Structural Studies of Two Mutants of Amicyanin from Paracoccus denitrificans That Stabilize the Reduced State of the Copper.
Biochemistry, 43, 2004
1SG8
DownloadVisualize
BU of 1sg8 by Molmil
Crystal structure of the procoagulant fast form of thrombin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, thrombin
著者Pineda, A.O, Carrell, C.J, Bush, L.A, Prasad, S, Caccia, S, Chen, Z.W, Mathews, F.S, Di Cera, E.
登録日2004-02-23
公開日2004-06-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular dissection of na+ binding to thrombin.
J.Biol.Chem., 279, 2004
1K6W
DownloadVisualize
BU of 1k6w by Molmil
The Structure of Escherichia coli Cytosine Deaminase
分子名称: Cytosine Deaminase, FE (III) ION
著者Ireton, G.C, McDermott, G, Black, M.E, Stoddard, B.L.
登録日2001-10-17
公開日2002-02-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structure of Escherichia coli cytosine deaminase.
J.Mol.Biol., 315, 2002
1S1Z
DownloadVisualize
BU of 1s1z by Molmil
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 nanoseconds
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive Yellow Protein
著者Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
登録日2004-01-07
公開日2004-06-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon