Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8V0K
DownloadVisualize
BU of 8v0k by Molmil
The structure of the native cardiac thin filament troponin core in Ca2+-bound partially activated state from the lower strand
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Galkin, V.E, Risi, C.M.
登録日2023-11-17
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Troponin Structural Dynamics in the Native Cardiac Thin Filament Revealed by Cryo Electron Microscopy.
J.Mol.Biol., 436, 2024
5I90
DownloadVisualize
BU of 5i90 by Molmil
Crystal Structure of PvdN from Pseudomonas Aeruginosa
分子名称: 1,2-ETHANEDIOL, PYRIDOXAL-5'-PHOSPHATE, PvdN
著者Drake, E.J, Gulick, A.M.
登録日2016-02-19
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.219 Å)
主引用文献1.2 angstrom resolution crystal structure of the periplasmic aminotransferase PvdN from Pseudomonas aeruginosa.
Acta Crystallogr F Struct Biol Commun, 72, 2016
7RP5
DownloadVisualize
BU of 7rp5 by Molmil
CLC-ec1 at pH 4.5 100mM Cl Turn
分子名称: H(+)/Cl(-) exchange transporter ClcA
著者Fortea, E, Boudker, O, Accardi, A.
登録日2021-08-03
公開日2022-11-16
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Structural basis of common gate activation in CLC transporters
To Be Published
6MSF
DownloadVisualize
BU of 6msf by Molmil
F6 APTAMER MS2 COAT PROTEIN COMPLEX
分子名称: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3')
著者Convery, M.A, Rowsell, S, Stonehouse, N.J, Ellington, A.D, Hirao, I, Murray, J.B, Peabody, D.S, Phillips, S.E.V, Stockley, P.G.
登録日1998-01-06
公開日1998-07-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nat.Struct.Biol., 5, 1998
8QSR
DownloadVisualize
BU of 8qsr by Molmil
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-facing conformation
分子名称: PTS system glucose-specific EIICB component, beta-D-glucopyranose
著者Roth, P, Fotiadis, D, Jeckelmann, J.-M.
登録日2023-10-11
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
To Be Published
8BQR
DownloadVisualize
BU of 8bqr by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with biotin-functionalised Anderson-Evans polyoxometalate
分子名称: Anderson-Evans polyoxometalate (biotin-functionalised), CALCIUM ION, Lysozyme C
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8UWY
DownloadVisualize
BU of 8uwy by Molmil
The structure of the native cardiac thin filament troponin core in Ca2+-free rotated state from the upper strand
分子名称: Actin, alpha cardiac muscle 1, Tropomyosin alpha-1 chain, ...
著者Galkin, V.E, Risi, C.M.
登録日2023-11-08
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Troponin Structural Dynamics in the Native Cardiac Thin Filament Revealed by Cryo Electron Microscopy.
J.Mol.Biol., 436, 2024
6CJ1
DownloadVisualize
BU of 6cj1 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG071
分子名称: 1,2-ETHANEDIOL, 11-[(2R)-butan-2-yl]-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, 11-[(2S)-butan-2-yl]-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, ...
著者Xu, X, Blacklow, S.C.
登録日2018-02-25
公開日2018-08-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural and Atropisomeric Factors Governing the Selectivity of Pyrimido-benzodiazipinones as Inhibitors of Kinases and Bromodomains.
ACS Chem. Biol., 13, 2018
5LSV
DownloadVisualize
BU of 5lsv by Molmil
X-ray crystal structure of AA13 LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AoAA13, ZINC ION, ...
著者Frandsen, K.E.H, Poulsen, J.-C.N, Tovborg, M, Johansen, K.S, Lo Leggio, L.
登録日2016-09-05
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder.
Acta Crystallogr D Struct Biol, 73, 2017
8UZX
DownloadVisualize
BU of 8uzx by Molmil
The structure of the native cardiac thin filament troponin core in Ca2+-bound fully activated state from the upper strand
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Galkin, V.E, Risi, C.M.
登録日2023-11-16
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Troponin Structural Dynamics in the Native Cardiac Thin Filament Revealed by Cryo Electron Microscopy.
J.Mol.Biol., 436, 2024
5LRT
DownloadVisualize
BU of 5lrt by Molmil
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP and Phosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, Depupylase, ...
著者Bolten, M, Vahlensieck, C, Lipp, C, Leibundgut, M, Ban, N, Weber-Ban, E.
登録日2016-08-19
公開日2017-02-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Depupylase Dop Requires Inorganic Phosphate in the Active Site for Catalysis.
J. Biol. Chem., 292, 2017
5LS4
DownloadVisualize
BU of 5ls4 by Molmil
Mopeia virus exonuclease domain complexed with Calcium
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Nucleoprotein, ...
著者Yekwa, E.L, Canard, B, Ferron, F.
登録日2016-08-22
公開日2017-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.469 Å)
主引用文献Activity inhibition and crystal polymorphism induced by active-site metal swapping.
Acta Crystallogr D Struct Biol, 73, 2017
5LV0
DownloadVisualize
BU of 5lv0 by Molmil
Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product
分子名称: CHLORIDE ION, GLY-VAL-VAL amyloid 35-40 fragment, Neurolysin, ...
著者Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P.
登録日2016-09-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network
To Be Published
6MVN
DownloadVisualize
BU of 6mvn by Molmil
LasR LBD L130F:3OC10HSL complex
分子名称: 3-oxo-N-[(3S)-2-oxotetrahydrofuran-3-yl]decanamide, Transcriptional regulator LasR
著者Bassler, B.L, Paczkowski, J.E.
登録日2018-10-26
公開日2019-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural determinants driving homoserine lactone ligand selection in thePseudomonas aeruginosaLasR quorum-sensing receptor.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5IDU
DownloadVisualize
BU of 5idu by Molmil
Crystal structure of an acyl-CoA dehydrogenase domain protein from Burkholderia phymatum bound to FAD
分子名称: 1,2-ETHANEDIOL, Acyl-CoA dehydrogenase domain protein, FLAVIN-ADENINE DINUCLEOTIDE
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID), Edwards, T.E.
登録日2016-02-24
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of an acyl-CoA dehydrogenase domain protein from Burkholderia phymatum bound to FAD
To Be Published
5LVN
DownloadVisualize
BU of 5lvn by Molmil
Human PDK1 Kinase Domain in Complex with Adenosine Bound to the ATP-Binding Site
分子名称: 3-phosphoinositide-dependent protein kinase 1, ADENOSINE, CHLORIDE ION, ...
著者Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
登録日2016-09-14
公開日2016-10-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.379 Å)
主引用文献Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
6D1O
DownloadVisualize
BU of 6d1o by Molmil
FT_5 dioxygenase apoenzyme
分子名称: (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase
著者Rydel, T.J, Halls, C.E.
登録日2018-04-12
公開日2018-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
4YUP
DownloadVisualize
BU of 4yup by Molmil
Multiconformer fixed-target X-ray free electron (XFEL) model of CypA at 273 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
5IFE
DownloadVisualize
BU of 5ife by Molmil
Crystal structure of the human SF3b core complex
分子名称: PHD finger-like domain-containing protein 5A, POTASSIUM ION, Splicing factor 3B subunit 1, ...
著者Cretu, C, Dybkov, O, De Laurentiis, E, Will, C.L, Luhrmann, R, Pena, V.
登録日2016-02-25
公開日2016-10-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular Architecture of SF3b and Structural Consequences of Its Cancer-Related Mutations.
Mol.Cell, 64, 2016
6MWL
DownloadVisualize
BU of 6mwl by Molmil
LasR LBD:mBTL complex
分子名称: 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, Transcriptional regulator LasR
著者Bassler, B.L, Paczkowski, J.E.
登録日2018-10-29
公開日2019-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An Autoinducer Analogue Reveals an Alternative Mode of Ligand Binding for the LasR Quorum-Sensing Receptor.
Acs Chem.Biol., 14, 2019
5LSH
DownloadVisualize
BU of 5lsh by Molmil
human lysozyme in complex with a tetrasaccharide fragment of the O-chain of LPS from Klebsiella pneumoniae
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Zhang, R, Nifantiev, N.E, Krylov, V, Luetteke, T, Scheidig, A.J, Siebert, H.-C.
登録日2016-08-26
公開日2017-06-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.061 Å)
主引用文献Lysozyme's lectin-like characteristics facilitates its immune defense function.
Q. Rev. Biophys., 50, 2017
6SHQ
DownloadVisualize
BU of 6shq by Molmil
Escherichia coli AGPase in complex with AMP. Symmetry C2
分子名称: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase
著者Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
登録日2019-08-07
公開日2020-02-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
6MWZ
DownloadVisualize
BU of 6mwz by Molmil
LasR LBD T75V/Y93F/A127W:BB0126
分子名称: 4-[3-(methylsulfonyl)phenoxy]-N-[(1S,3S,5S)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide, ALA-HIS-HIS-HIS-HIS-ALA, Transcriptional regulator LasR
著者Bassler, B.L, Paczkowski, J.E.
登録日2018-10-30
公開日2019-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.657 Å)
主引用文献An Autoinducer Analogue Reveals an Alternative Mode of Ligand Binding for the LasR Quorum-Sensing Receptor.
Acs Chem.Biol., 14, 2019
4YUK
DownloadVisualize
BU of 4yuk by Molmil
Multiconformer synchrotron model of CypA at 260 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
6SIE
DownloadVisualize
BU of 6sie by Molmil
Crystal structure of the C-lobe of drosophila Arc 2
分子名称: Activity-regulated cytoskeleton associated protein 2, SULFATE ION
著者Hallin, E.I, Kursula, P.
登録日2019-08-09
公開日2019-08-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal and solution structures reveal oligomerization of individual capsid homology domains of Drosophila Arc.
Plos One, 16, 2021

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon