PDB: 36939 件ウェブページステータス検索Chemie searchBIRD

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5EAD	Saccharomyces cerevisiae CYP51 complexed with the plant pathogen inhibitor S-desthio-prothioconazole 分子名称: (2~{S})-2-(1-chloranylcyclopropyl)-1-(2-chlorophenyl)-3-(1,2,4-triazol-1-yl)propan-2-ol, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE 著者 Tyndall, J.D.A, Sabherwal, M, Sagatova, A.A, Keniya, M.V, Wilson, R.K, Woods, M.V, Monk, B.C. 登録日 2015-10-16 公開日 2016-02-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Functional Elucidation of Yeast Lanosterol 14 alpha-Demethylase in Complex with Agrochemical Antifungals. PLoS ONE, 11, 2016
8JQ1	Solution NMR Structure of zinc fingers 1-2 (fragment 257-320) from human insulinoma-associated protein 1(INSM1) 分子名称: Insulinoma-associated protein 1, ZINC ION 著者 He, X.L, Yang, Y.H. 登録日 2023-06-13 公開日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution NMR Structure of zinc fingers 1-2 (fragment 257-320) from human insulinoma-associated protein 1(INSM1) To Be Published
5OB0	Crystal structure of the c-Src-SH3 domain Q128E mutant in complex with the high affinity peptide APP12 分子名称: APP12, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION 著者 Camara-Artigas, A. 登録日 2017-06-25 公開日 2017-07-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.172 Å) 主引用文献 Crystal structure of the c-Src-SH3 domain Q128E mutant in complex with the high affinity peptide APP12 to be published
5OB6	X-ray structure of the adduct formed upon reaction of lysozyme with the compound fac-[RuII(CO)3Cl2(N3-IM), IM=imidazole 分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ... 著者 Pontillo, N, Ferraro, G, Merlino, A. 登録日 2017-06-26 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Ru-Based CO releasing molecules with azole ligands: interaction with proteins and the CO release mechanism disclosed by X-ray crystallography. Dalton Trans, 46, 2017
5OBD	X-ray structure of the adduct formed upon reaction of ribonuclease A with the compound fac-[RuII(CO)3Cl2(N3-MIM), MIM=methyl-imidazole 分子名称: PHOSPHATE ION, Ribonuclease pancreatic, tris(oxidaniumylidynemethyl)-tris(oxidanyl)ruthenium 著者 Pontillo, N, Ferraro, G, Merlino, A. 登録日 2017-06-26 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Ru-Based CO releasing molecules with azole ligands: interaction with proteins and the CO release mechanism disclosed by X-ray crystallography. Dalton Trans, 46, 2017
5OCO	Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method. 分子名称: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GTPase KRas, ... 著者 Cruz-Migoni, A, Ehebauer, M.T, Phillips, S.E.V, Quevedo, C.E, Rabbitts, T.H. 登録日 2017-07-03 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment. Nat Commun, 9, 2018
5E4P	X-ray Crystal Structure Analysis of Magnetically Oriented Microcrystals of Lysozyme at 1.8 angstrom Resolution 分子名称: Lysozyme C 著者 Tsukui, S, Kimura, F, Garman, E.F, Baba, S, Mizuno, N, Mikami, B, Kimura, T. 登録日 2015-10-06 公開日 2016-08-31 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.792 Å) 主引用文献 X-ray crystal structure analysis of magnetically oriented microcrystals of lysozyme at 1.8 A resolution J.Appl.Crystallogr., 49, 2016
5DR1	Endothiapepsin in complex with fragment 278 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Schiebel, J, Heine, A, Klebe, G. 登録日 2015-09-15 公開日 2016-09-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystallographic Fragment Screening of an Entire Library To Be Published
5EAH	Saccharomyces cerevisiae CYP51 complexed with the plant pathogen inhibitor Difenoconazole 分子名称: 1-[[(2~{R},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole, 1-[[(2~{R},4~{S})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole, 1-[[(2~{S},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole, ... 著者 Tyndall, J.D.A, Sabherwal, M, Keniya, M.V, Wilson, R.K, Woods, M.V, Monk, B.C. 登録日 2015-10-16 公開日 2016-02-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.541 Å) 主引用文献 Structural and Functional Elucidation of Yeast Lanosterol 14 alpha-Demethylase in Complex with Agrochemical Antifungals. PLoS ONE, 11, 2016
5EC7	Crystal structure of a chimeric c-Src-SH3 domain with the sequence of the RT-loop from the Abl-SH3 domain at pH 5.0 分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src 著者 Camara-Artigas, A. 登録日 2015-10-20 公開日 2016-11-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of a chimeric c-Src-SH3 domain with the sequence of the RT-loop from the Abl-SH3 domain at pH 5.0 to be published
5DZM	HIV-1 Reverse Transcriptase RH domain 分子名称: Ribonuclease H 著者 Pedersen, L.C, London, R.E, Gabel, S.A, Zheng, X.H. 登録日 2015-09-25 公開日 2016-05-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Unfolding the HIV-1 reverse transcriptase RNase H domain - how to lose a molecular tug-of-war. Nucleic Acids Res., 44, 2016
8K3A	SOD1 and Nanobody2 complex 分子名称: NB2, Superoxide dismutase [Cu-Zn], ZINC ION 著者 Cheng, S. 登録日 2023-07-14 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 SOD1 and Nanobody1 complex To Be Published
8K3L	SOD1 and Nanobody3 complex 分子名称: COPPER (II) ION, NB3, Superoxide dismutase [Cu-Zn], ... 著者 Cheng, S, Liu, R, Ding, Y. 登録日 2023-07-16 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 SOD1 and Nanobody1 complex To Be Published
8K33	SOD1 and Nanobody1 complex 分子名称: NB1, Superoxide dismutase [Cu-Zn], ZINC ION 著者 Cheng, S. 登録日 2023-07-14 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 SOD1 and Nanobody1 complex To Be Published
5DMJ	Structure of the extracellular domain of the CD40 in complex with 3H56-5 DAB 分子名称: 3H65-5 domain antibody (dAb), POTASSIUM ION, Tumor necrosis factor receptor superfamily member 5 著者 Sheriff, S. 登録日 2015-09-08 公開日 2016-06-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Functional Antagonism of Human CD40 Achieved by Targeting a Unique Species-Specific Epitope. J.Mol.Biol., 428, 2016
8HYI	Crystal structure of human P-cadherin MEC12 (X dimer) in complex with 2-(2-methyl-5-phenyl-1H-indole-3-yl)ethan-1-amine 分子名称: 2-(2-methyl-5-phenyl-1H-indole-3-yl)ethan-1-amine, CALCIUM ION, Cadherin-3, ... 著者 Senoo, A, Ito, S, Ueno, G, Nagatoishi, S, Tsumoto, K. 登録日 2023-01-06 公開日 2023-08-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Modulation of a conformational ensemble by a small molecule that inhibits key protein-protein interactions involved in cell adhesion. Protein Sci., 32, 2023
5E53	Crystal structure of chicken CNTN1 FN1-FN3 domains 分子名称: Contactin-1, IMIDAZOLE 著者 Nikolaienko, R.M, Bouyain, S. 登録日 2015-10-07 公開日 2016-08-31 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.497 Å) 主引用文献 Structural Basis for Interactions Between Contactin Family Members and Protein-tyrosine Phosphatase Receptor Type G in Neural Tissues. J.Biol.Chem., 291, 2016
8IQ0	Crystal structure of hydrogen sulfide-bound superoxide dismutase in oxidized state 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... 著者 Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C. 登録日 2023-03-15 公開日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme. Cell Rep, 42, 2023
5BQB	Crystal structure of Norrin, a Wnt signalling activator, Crystal Form III 分子名称: CHLORIDE ION, CITRIC ACID, Norrin 著者 Chang, T.-H, Hsieh, F.-L, Harlos, K, Jones, E.Y. 登録日 2015-05-28 公開日 2015-07-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure and functional properties of Norrin mimic Wnt for signalling with Frizzled4, Lrp5/6, and proteoglycan. Elife, 4, 2015
5B85	X-ray structure of ferric F138Y sperm whale myoglobin 分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE 著者 Yuan, H. 登録日 2016-06-12 公開日 2016-08-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Distinct roles of a tyrosine-associated hydrogen-bond network in fine-tuning the structure and function of heme proteins: two cases designed for myoglobin Mol Biosyst, 12, 2016
8IBX	Structure of R2 with 3'UTR and DNA in unwinding state 分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ... 著者 Deng, P, Tan, S, Wang, J, Liu, J.J. 登録日 2023-02-10 公開日 2023-09-20 実験手法 ELECTRON MICROSCOPY (3.74 Å) 主引用文献 Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon. Cell, 186, 2023
8IQ1	Crystal structure of hydrogen sulfide-bound superoxide dismutase in reduced state 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... 著者 Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C. 登録日 2023-03-15 公開日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme. Cell Rep, 42, 2023
8IA3	Crystal structure of human USF2 bHLHLZ domain in complex with DNA 分子名称: DNA (5'-D(*GP*CP*GP*CP*GP*TP*CP*AP*CP*GP*TP*GP*CP*CP*CP*GP*TP*C)-3'), DNA (5'-D(P*GP*AP*CP*GP*GP*GP*CP*AP*CP*GP*TP*GP*AP*CP*GP*CP*GP*C)-3'), Upstream stimulatory factor 2 著者 Huang, C, Fang, P, Wang, J. 登録日 2023-02-07 公開日 2023-09-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Tetramerization of upstream stimulating factor USF2 requires the elongated bent leucine zipper of the bHLH-LZ domain. J.Biol.Chem., 299, 2023
8IBW	Structure of R2 with 3'UTR and DNA in binding state 分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ... 著者 Deng, P, Tan, S, Wang, J, Liu, J.J. 登録日 2023-02-10 公開日 2023-09-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon. Cell, 186, 2023
8IBZ	Structure of R2 with 5'ORF and 3'UTR 分子名称: 5ORF-linker-3UTR, Reverse transcriptase-like protein, ZINC ION 著者 Deng, P, Tan, S, Wang, J, Liu, J.J. 登録日 2023-02-10 公開日 2023-09-20 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon. Cell, 186, 2023

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