Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TOE
DownloadVisualize
BU of 6toe by Molmil
Imine Reductase from Myxococcus stipitatus V8 variant in complex with NAD+
分子名称: Coenzyme F420-dependent NADP oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Sharma, M, Nestl, B, Grogan, G.
登録日2019-12-11
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Inverting the Stereoselectivity of an NADH-Dependent Imine-Reductase Variant
Chemcatchem, 2021
6QAM
DownloadVisualize
BU of 6qam by Molmil
Solution NMR structure of outer membrane protein AlkL
分子名称: Outer membrane protein AlkL
著者Schubeis, T, Andreas, L.B, Pintacuda, G.
登録日2018-12-19
公開日2020-01-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A beta-barrel for oil transport through lipid membranes: Dynamic NMR structures of AlkL.
Proc.Natl.Acad.Sci.USA, 117, 2020
6TO4
DownloadVisualize
BU of 6to4 by Molmil
Imine Reductase from Myxococcus stipitatus in complex with NADP+
分子名称: Coenzyme F420-dependent NADP oxidoreductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Sharma, M, Nestl, B, Grogan, G.
登録日2019-12-11
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Inverting the Stereoselectivity of an NADH-Dependent Imine-Reductase Variant
Chemcatchem, 2021
7KBK
DownloadVisualize
BU of 7kbk by Molmil
Ricin bound to VHH antibody V6E11
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin, ...
著者Rudolph, M.J.
登録日2020-10-02
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
6HUE
DownloadVisualize
BU of 6hue by Molmil
ParkinS65N
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
著者McWilliams, T.G, Barini, E, Pohjolan-Pirhonen, R, Brooks, S.P, Singh, F, Burel, S, Balk, K, Kumar, A, Montava-Garriga, L, Prescott, A.R, Hassoun, S.M, Mouton-Liger, F, Ball, G, Hills, R, Knebel, A, Ulusoy, A, Di Monte, D.A, Tamjar, J, Antico, O, Fears, K, Smith, L, Brambilla, R, Palin, E, Valori, M, Eerola-Rautio, J, Tienari, P, Corti, O, Dunnett, S.B, Ganley, I.G, Suomalainen, A, Muqit, M.M.K.
登録日2018-10-07
公開日2018-10-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Phosphorylation of Parkin at serine 65 is essential for its activation in vivo .
Open Biology, 8, 2018
8BDS
DownloadVisualize
BU of 8bds by Molmil
Ternary complex between VCB, BRD4-BD1 and PROTAC 48
分子名称: (2S,4R)-N-[(1S)-1-(4-chlorophenyl)-3-[2-[2-[2-[2-[2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8$l^{5},11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]ethoxy]ethoxy]ethoxy]ethylamino]-3-oxidanylidene-propyl]-1-[(2R)-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-20
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
8BEB
DownloadVisualize
BU of 8beb by Molmil
Ternary complex between VCB, BRD4-BD1 and PROTAC 49
分子名称: (2~{S},4~{R})-~{N}-[(1~{S})-3-[4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]butylamino]-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxidanylidene-propyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, Elongin-B, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-21
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
6Q9T
DownloadVisualize
BU of 6q9t by Molmil
Protein-aromatic foldamer complex crystal structure
分子名称: Aromatic foldamer, Carbonic anhydrase 2, ZINC ION
著者Post, S, Langlois d'Estaintot, B, Fischer, L, Granier, T, Huc, I.
登録日2018-12-18
公開日2019-09-18
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structure Elucidation of Helical Aromatic Foldamer-Protein Complexes with Large Contact Surface Areas.
Chemistry, 25, 2019
6TBK
DownloadVisualize
BU of 6tbk by Molmil
Structure of a beta galactosidase with inhibitor
分子名称: 5-(dimethylamino)-~{N}-[6-[(2~{R},3~{R},4~{S},5~{R})-3-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-2-yl]hexyl]naphthalene-1-sulfonamide, Beta-galactosidase, putative, ...
著者Offen, W, Davies, G.
登録日2019-11-01
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
6TCN
DownloadVisualize
BU of 6tcn by Molmil
Crystal structure of the omalizumab Fab - crystal form II
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
登録日2019-11-06
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
5FW5
DownloadVisualize
BU of 5fw5 by Molmil
Crystal structure of human G3BP1 in complex with Semliki Forest Virus nsP3-25 comprising two FGDF motives
分子名称: ACETATE ION, GLYCEROL, NON-STRUCTURAL PROTEIN 3, ...
著者Schulte, T, Liu, L, Panas, M.D, Thaa, B, Goette, B, Achour, A, McInerney, G.M.
登録日2016-02-12
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Combined structural, biochemical and cellular evidence demonstrates that both FGDF motifs in alphavirus nsP3 are required for efficient replication.
Open Biol, 6, 2016
5KCQ
DownloadVisualize
BU of 5kcq by Molmil
Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4 in complex with geranyl S-thiolodiphosphate
分子名称: GERANYL S-THIOLODIPHOSPHATE, aromatic prenyltransferase
著者Sun, F, Gao, B.
登録日2016-06-06
公開日2016-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular insights into the enzyme promiscuity of an aromatic prenyltransferase.
Nat. Chem. Biol., 13, 2017
5KD1
DownloadVisualize
BU of 5kd1 by Molmil
Sperm whale myoglobin H64A with nitrosoamphetamine
分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Wang, B, Guan, Y, Thomas, L.M, Richter-Addo, G.B.
登録日2016-06-07
公開日2017-05-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Nitrosoamphetamine binding to myoglobin and hemoglobin: Crystal structure of the H64A myoglobin-nitrosoamphetamine adduct.
Nitric Oxide, 67, 2017
5KDA
DownloadVisualize
BU of 5kda by Molmil
Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4 in complex with dimethylallyl S-thiolodiphosphate and genistein
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, GENISTEIN, aromatic prenyltransferase
著者Sun, F, Gao, B.
登録日2016-06-07
公開日2016-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular insights into the enzyme promiscuity of an aromatic prenyltransferase.
Nat. Chem. Biol., 13, 2017
8C0G
DownloadVisualize
BU of 8c0g by Molmil
SARS-CoV nsp16-nsp10 complexed with N7-GTP
分子名称: DI(HYDROXYETHYL)ETHER, Non-structural protein 7, SODIUM ION, ...
著者Ferron, F, Debarnot, C, Coutard, B, Canard, B, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2022-12-16
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Observation of N7-GTP in nsp16-nsp10 Sars-CoV
To Be Published
8BZ7
DownloadVisualize
BU of 8bz7 by Molmil
Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose
分子名称: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, CHLORIDE ION, D(-)-TARTARIC ACID, ...
著者Cereija, T.B, Morais-Cabral, J.H.
登録日2022-12-14
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose
To Be Published
8G2K
DownloadVisualize
BU of 8g2k by Molmil
Structure of the H3 hemagglutinin of A/California/7/2004
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Venkatramani, L, Mooers, B.H.M, Air, G.M.
登録日2023-02-05
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of the H3 hemagglutinin of A/California/7/2004
To Be Published
6NL8
DownloadVisualize
BU of 6nl8 by Molmil
Crystal structure of de novo designed metal-controlled dimer of mutant B1 immunoglobulin-binding domain of Streptococcal Protein G (L12H, T16L, V29H, Y33H, N37L)-zinc
分子名称: CHLORIDE ION, Immunoglobulin G-binding protein G, ZINC ION
著者Maniaci, B, Stec, B, Huxford, T.
登録日2019-01-08
公開日2019-01-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Design of High-Affinity Metal-Controlled Protein Dimers.
Biochemistry, 58, 2019
6C3D
DownloadVisualize
BU of 6c3d by Molmil
O2-, PLP-dependent L-arginine hydroxylase RohP quinonoid II complex
分子名称: (2E,3E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pent-3-enoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Hedges, J.B, Ryan, K.S.
登録日2018-01-09
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6TBF
DownloadVisualize
BU of 6tbf by Molmil
Structure of a beta galactosidase with inhibitor
分子名称: (1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol, ACETATE ION, Beta-galactosidase, ...
著者Offen, W, Davies, G.
登録日2019-11-01
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
8CSC
DownloadVisualize
BU of 8csc by Molmil
WbbB D232N-Kdo adduct
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
6TAO
DownloadVisualize
BU of 6tao by Molmil
The cytotoxin MakE from Vibrio cholerae
分子名称: NICKEL (II) ION, Non-hemolytic enterotoxin lytic component L1, SULFATE ION
著者Persson, K, Nagampalli, R, Heidler, T, Wai, S.N.
登録日2019-10-30
公開日2020-11-18
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献A tripartite cytolytic toxin formed by Vibrio cholerae proteins with flagellum-facilitated secretion.
Proc.Natl.Acad.Sci.USA, 118, 2021
6VL4
DownloadVisualize
BU of 6vl4 by Molmil
Crystal Structure of mPGES-1 bound to DG-031
分子名称: (2R)-cyclopentyl{4-[(quinolin-2-yl)methoxy]phenyl}acetic acid, Prostaglandin E synthase, TETRAETHYLENE GLYCOL, ...
著者Ho, J.D, Lee, M.R, Rauch, C.T, Aznavour, K, Park, J.S, Luz, J.G, Antonysamy, S, Condon, B, Maletic, M, Zhang, A, Hickey, M.J, Hughes, N.E, Chandrasekhar, S, Sloan, A.V, Gooding, K, Harvey, A, Yu, X.P, Kahl, S.D, Norman, B.H.
登録日2020-01-22
公開日2020-12-02
最終更新日2020-12-16
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP).
Biochim Biophys Acta Gen Subj, 1865, 2020
6TB2
DownloadVisualize
BU of 6tb2 by Molmil
Structure of human haptoglobin-hemoglobin bound to S. aureus IsdH
分子名称: Cell wall surface anchor family protein, Haptoglobin, Hemoglobin subunit alpha, ...
著者Mikkelsen, J.H, Andersen, C.B.F.
登録日2019-10-31
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Haptoglobin is an inhibitor of Staphylococcus aureus IsdH-mediated heme-sequestering
To Be Published
6VSD
DownloadVisualize
BU of 6vsd by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-((thiophen-2-ylthio)methyl)benzoic acid (fragment 13)
分子名称: 3-(thiophen-2-ylsulfanylmethyl)benzoic acid, COBALT (II) ION, Dihydrofolate reductase, ...
著者Ribeiro, J.A, Dias, M.V.B.
登録日2020-02-11
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.693 Å)
主引用文献Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon