PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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8FTD	Structure of Escherichia coli CedA in complex with transcription initiation complex 分子名称: CHAPSO, Cell division activator CedA, DNA-directed RNA polymerase subunit alpha, ... 著者 Liu, M, Vassyliev, N, Nudler, E. 登録日 2023-01-11 公開日 2024-01-10 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 General transcription factor from Escherichia coli with a distinct mechanism of action. Nat.Struct.Mol.Biol., 31, 2024
7ADB	Transcription termination intermediate complex 1 delta NusG 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, C.M. 登録日 2020-09-14 公開日 2020-11-04 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
7NVR	Human Mediator with RNA Polymerase II Pre-initiation complex 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Rengachari, S, Schilbach, S, Aibara, S, Cramer, P. 登録日 2021-03-15 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
8EOS	M. tuberculosis RNAP elongation complex with NusG and CMPCPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (36-MER), DNA (38-MER), ... 著者 Vishwakarma, R.K, Murakami, K.S. 登録日 2022-10-04 公開日 2023-02-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase. Proc.Natl.Acad.Sci.USA, 120, 2023
4FMN	Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer bound to a fragment of NTG2 分子名称: 1,2-ETHANEDIOL, DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, ... 著者 Gueneau, E, Legrand, P, Charbonnier, J.B. 登録日 2012-06-18 公開日 2013-02-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structure of the MutL alpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site. Nat.Struct.Mol.Biol., 20, 2013
7ADE	Transcription termination complex IVa 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, C.M. 登録日 2020-09-14 公開日 2020-11-25 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
4XLR	Crystal structure of T.aquaticus transcription initiation complex with CarD containing bubble promoter and RNA 分子名称: CarD-like transcriptional regulator, DNA (48-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-13 公開日 2015-09-23 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex. Elife, 4, 2015
1ICG	STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF IR(NH3)6+++ 分子名称: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UFP))-3', CHLORIDE ION, IRIDIUM HEXAMMINE ION 著者 Cruse, W, Saludjian, P, Neuman, A, Prange, T. 登録日 2001-03-31 公開日 2001-04-09 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues. Acta Crystallogr.,Sect.D, 57, 2001
1ID9	STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF RH(NH3)6+++ 分子名称: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UFP))-3', CHLORIDE ION, RHODIUM HEXAMINE ION 著者 Cruse, W, Saludjian, P, Neuman, A, Prange, T. 登録日 2001-04-04 公開日 2001-04-12 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues. Acta Crystallogr.,Sect.D, 57, 2001
6L9H	The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties 分子名称: Histone H2A type 1-B/E, Histone H2B type 1-K, Histone H3.1, ... 著者 Soman, A, Liew, C.W, Teo, H.L, Berezhnoy, N, Korolev, N, Rhodes, D, Nordenskiold, L. 登録日 2019-11-10 公開日 2020-04-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The human telomeric nucleosome displays distinct structural and dynamic properties. Nucleic Acids Res., 48, 2020
8WAK	Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positioned 2nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-07 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (5.47 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAR	Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positioned 8nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (7.2 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
6PSU	Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi2) with TraR and rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
6PSR	Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1) with TraR and rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
6PSW	Escherichia coli RNA polymerase promoter unwinding intermediate (TRPo) with TraR and rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
6PSQ	Escherichia coli RNA polymerase closed complex (TRPc) with TraR and rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
6PST	Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1.5b) with TraR and mutant rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
6PSV	Escherichia coli RNA polymerase promoter unwinding intermediate (TpreRPo) with TraR and rpsT P2 promoter 分子名称: CHAPSO, DNA (85-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Chen, J, Chiu, C.E, Campbell, E.A, Darst, S.A. 登録日 2019-07-13 公開日 2020-03-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Stepwise Promoter Melting by Bacterial RNA Polymerase. Mol.Cell, 78, 2020
8WAS	Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positioned 9nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (6.13 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAL	Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positioned 3nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-07 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (8.52 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAP	Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positioned 6nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (5.85 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAN	Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positioned 4nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-07 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (6.07 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAO	Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positioned 5nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-07 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (6.4 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8WAQ	Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positioned 7nt downstream of TSS. 分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ... 著者 Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y. 登録日 2023-09-08 公開日 2023-12-06 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (6.29 Å) 主引用文献 Structural visualization of transcription initiation in action. Science, 382, 2023
8X1C	Structure of nucleosome-bound SRCAP-C in the ADP-bound state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y. 登録日 2023-11-06 公開日 2024-03-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into histone exchange by human SRCAP complex. Cell Discov, 10, 2024

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