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7BH8
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3H4-Fab HLA-E-VL9 co-complex
分子名称: 3H4 Fab heavy chain, 3H4 Fab light chain, Beta-2-microglobulin, ...
著者Walters, L.C, Rozbesky, D.
登録日2021-01-10
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mouse and human antibodies bind HLA-E-leader peptide complexes and enhance NK cell cytotoxicity.
Commun Biol, 5, 2022
8YYQ
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Structure of the HitB F328L mutant
分子名称: Putative ATP-dependent b-aminoacyl-ACP synthetase, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(3~{S})-3-azanyl-3-(3-cyanophenyl)propanoyl]sulfamate
著者Wang, D, Miyanaga, A, Chisuga, T, Kudo, F, Eguchi, T.
登録日2024-04-04
公開日2024-06-05
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Engineering the Substrate Specificity of (S)-beta-Phenylalanine Adenylation Enzyme HitB.
Chembiochem, 25, 2024
4V1K
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SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1
分子名称: 2-HYDROXY BUTANE-1,4-DIOL, CALCIUM ION, CARBOHYDRATE BINDING MODULE, ...
著者Venditto, I, Goyal, A, Thompson, A, Ferreira, L.M.A, Fontes, C.M.G.A, Najmudin, S.
登録日2014-09-29
公開日2016-01-20
最終更新日2018-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects an Expansion in Glycan Recognition.
Proc.Natl.Acad.Sci.USA, 113, 2016
7BCA
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BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
分子名称: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
著者Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
登録日2020-12-18
公開日2022-07-13
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
8Z28
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FK506-binding protein 1B
分子名称: peptidylprolyl isomerase
著者Liu, X.H, Zhao, W.H.
登録日2024-04-12
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献FK506-binding protein 1B
To Be Published
4KI9
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BU of 4ki9 by Molmil
Crystal structure of the catalytic domain of human DUSP12 at 2.0 A resolution
分子名称: Dual specificity protein phosphatase 12, PHOSPHATE ION
著者Jeon, T.J, Chien, P.N, Ku, B, Kim, S.J, Ryu, S.E.
登録日2013-05-02
公開日2014-02-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The family-wide structure and function of human dual-specificity protein phosphatases
Acta Crystallogr.,Sect.D, 70, 2014
8YYR
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BU of 8yyr by Molmil
Structure of the HitB T293G mutant
分子名称: Putative ATP-dependent b-aminoacyl-ACP synthetase, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(3~{S})-3-azanyl-3-(2-bromophenyl)propanoyl]sulfamate
著者Wang, D, Miyanaga, A, Chisuga, T, Kudo, F, Eguchi, T.
登録日2024-04-04
公開日2024-06-05
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Engineering the Substrate Specificity of (S)-beta-Phenylalanine Adenylation Enzyme HitB.
Chembiochem, 25, 2024
4KIS
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Crystal Structure of a LSR-DNA Complex
分子名称: CALCIUM ION, DNA (26-MER), Putative integrase [Bacteriophage A118], ...
著者Rutherford, K, Yuan, P, Perry, K, Van Duyne, G.D.
登録日2013-05-02
公開日2013-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Attachment site recognition and regulation of directionality by the serine integrases.
Nucleic Acids Res., 41, 2013
8XUP
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BU of 8xup by Molmil
Crystal structure of lipoprotein NlpI in complex with MepS
分子名称: Lipoprotein NlpI, Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase
著者Tzeng, S.R, Wang, S, Huang, C.H.
登録日2024-01-13
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of lipoprotein NlpI in complex with MepS
To Be Published
9IK2
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BU of 9ik2 by Molmil
The co-crystal structure of SARS-CoV-2 Mpro in complex with compound H109
分子名称: 3C-like proteinase, tert-butyl N-[(2S)-1-[[(2S)-1-[[(2S)-1-azanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-3,3-dimethyl-1-oxidanylidene-butan-2-yl]carbamate
著者Feng, Y, Zheng, W.Y, Han, P, Fu, L.F, Qi, J.X.
登録日2024-06-26
公開日2024-07-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-guided discovery of a small molecule inhibitor of SARS-CoV-2 main protease with potent in vitro and in vivo antiviral activities
To Be Published
9CJA
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BU of 9cja by Molmil
Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure
分子名称: ZINC ION, Zinc finger protein 711
著者Rua, A.J, Alexandrescu, A.T.
登録日2024-07-05
公開日2024-07-17
実験手法SOLUTION NMR
主引用文献Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure
To Be Published
8ZN3
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BU of 8zn3 by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.41 A resolution.
分子名称: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHONOACETIC ACID, ...
著者Ahmad, N, Sharma, P, Bhushan, A, Sharma, S, Singh, T.P.
登録日2024-05-25
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.41 A resolution.
To Be Published
7BJQ
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BU of 7bjq by Molmil
Crystal structure of RecJCdc45 from Methanothermobacter thermoautotroficus in complex with ssDNA
分子名称: Conserved protein, DNA (5'-D(*5P*'P*-P*CP*AP*TP*GP*GP*CP*-P*3P*')-3'), MANGANESE (II) ION
著者De March, M, Onesti, S.
登録日2021-01-14
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of RecJCdc45 from Methanothermobacter thermoautotroficus
To Be Published
6X0L
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BU of 6x0l by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
分子名称: DNA (167-MER), Histone PARylation factor 1, Poly [ADP-ribose] polymerase 2
著者Halic, M, Bilokapic, S.
登録日2020-05-16
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
8XMT
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BU of 8xmt by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron EG.5.1 spike protein(6P), RBD-closed state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Li, L.J, Gu, Y.H, Shi, K.Y, Qi, J.X, Gao, G.F.
登録日2023-12-28
公開日2024-07-03
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 2024
6X0M
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BU of 6x0m by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
分子名称: DNA (167-MER), Histone PARylation factor 1, Poly [ADP-ribose] polymerase 2
著者Halic, M, Bilokapic, S.
登録日2020-05-16
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
4KO3
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BU of 4ko3 by Molmil
Low X-ray dose structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air
分子名称: CALCIUM ION, CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, ...
著者Volbeda, A, Cavazza, C, Fontecilla-Camps, J.C.
登録日2013-05-11
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural foundations for the O2 resistance of Desulfomicrobium baculatum [NiFeSe]-hydrogenase.
Chem.Commun.(Camb.), 49, 2013
4KPJ
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BU of 4kpj by Molmil
Crystal Structure of Farnesyl Pyrophosphate Synthase (Y204A) Mutant complexed with Mg, Pamidronate
分子名称: 1,2-ETHANEDIOL, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
著者Barnett, B.L, Tsoumpra, M.K, Muniz, J.R.C, Walter, R.L.
登録日2013-05-13
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Farnesyl Pyrophosphate Synthase (Y204A) Mutant complexed with Mg, Pamidronate
To be Published
4KQQ
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BU of 4kqq by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH (5S)-Penicilloic Acid
分子名称: (2S,4S)-2-[(R)-carboxy{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
著者Nettleship, J.E, Stuart, D.I, Owens, R.J, Ren, J.
登録日2013-05-15
公開日2013-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Binding of (5S)-Penicilloic Acid to Penicillin Binding Protein 3.
Acs Chem.Biol., 8, 2013
4KML
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BU of 4kml by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody
分子名称: Major prion protein, Nanobody
著者Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
登録日2013-05-08
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014
4JZ6
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BU of 4jz6 by Molmil
Crystal structure of a salicylaldehyde dehydrogenase from Pseudomonas putida G7 complexed with salicylaldehyde
分子名称: 1,2-ETHANEDIOL, SALICYLALDEHYDE, SULFATE ION, ...
著者Coitinho, J.B, Nagem, R.A.P.
登録日2013-04-02
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.417 Å)
主引用文献Structural and Kinetic Properties of the Aldehyde Dehydrogenase NahF, a Broad Substrate Specificity Enzyme for Aldehyde Oxidation.
Biochemistry, 55, 2016
4K11
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The structure of 1NA in complex with Src T338G
分子名称: 1-tert-butyl-3-(naphthalen-1-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Proto-oncogene tyrosine-protein kinase Src
著者Eck, M.J, Yun, C.H.
登録日2013-04-04
公開日2014-04-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structure of 1NA in complex with Src T338G
To be Published
7C95
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Crystal structure of the anti-human podoplanin antibody Fab fragment
分子名称: GLYCEROL, Heavy chain of Fab fragment, Light chain of Fab fragment, ...
著者Nakamura, S, Suzuki, K, Ogasawara, S, Naruchi, K, Shimabukuro, J, Tukahara, N, Kaneko, M.K, Kato, Y, Murata, T.
登録日2020-06-04
公開日2020-09-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of an anti-podoplanin antibody bound to a disialylated O-linked glycopeptide.
Biochem.Biophys.Res.Commun., 533, 2020
4V3P
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The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes
分子名称: 18S ribosomal RNA, 26S ribosomal RNA, 40S WHEAT GERM RIBOSOME protein 4, ...
著者Myasnikov, A.G, Afonina, Z.A, Menetret, J.F, Shirokov, V.A, Spirin, A.S, Klaholz, B.P.
登録日2014-10-20
公開日2015-04-22
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (34 Å)
主引用文献The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes.
Nat Commun, 5, 2014
4KQ8
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Structure of Recombinant Human Cytochrome P450 Aromatase
分子名称: 4-ANDROSTENE-3-17-DIONE, Cytochrome P450 19A1, PHOSPHATE ION, ...
著者Ghosh, D, Di Nardo, G, Griswold, J.
登録日2013-05-14
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structural basis for the functional roles of critical residues in human cytochrome p450 aromatase.
Biochemistry, 52, 2013

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件を2024-08-14に公開中

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