PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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2N05	Solution Structure of the non-phosphorylated N-terminal region of Human Cysteine String Protein (CSP) 分子名称: DnaJ homolog subfamily C member 5 著者 Patel, P, Lian, L, Morgan, A, Burgoyne, R. 登録日 2015-03-04 公開日 2016-07-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Phosphorylation of Cysteine String Protein Triggers a Major Conformational Switch. Structure, 24, 2016
6PRQ	Structural Basis for Client Recognition and Activity of Hsp40 Chaperones 分子名称: Alkaline phosphatase,Chaperone protein DnaJ 2 fusion 著者 Jiang, Y, Rossi, P, Kalodimos, C.G. 登録日 2019-07-10 公開日 2019-09-18 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural basis for client recognition and activity of Hsp40 chaperones. Science, 365, 2019
6PRJ	Structural Basis for Client Recognition and Activity of Hsp40 Chaperones 分子名称: Alkaline phosphatase,Chaperone protein DnaJ 2 fusion 著者 Jiang, Y, Rossi, P, Kalodimos, C.G. 登録日 2019-07-10 公開日 2019-09-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for client recognition and activity of Hsp40 chaperones. Science, 365, 2019
6PRI	Structural Basis for Client Recognition and Activity of Hsp40 Chaperones 分子名称: Alkaline phosphatase,Chaperone protein DnaJ 2 著者 Jiang, Y, Rossi, P, Kalodimos, C.G. 登録日 2019-07-10 公開日 2019-09-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for client recognition and activity of Hsp40 chaperones. Science, 365, 2019
2N04	Solution Structure of the phosphorylated N-terminal region of Human Cysteine String Protein (CSP) 分子名称: DnaJ homolog subfamily C member 5 著者 Patel, P, Lian, L, Morgan, A, Burgoyne, R. 登録日 2015-03-04 公開日 2016-07-13 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Phosphorylation of Cysteine String Protein Triggers a Major Conformational Switch. Structure, 24, 2016
4JNF	Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP 分子名称: Hsp70 CHAPERONE DnaK 著者 Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q. 登録日 2013-03-15 公開日 2013-05-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.621 Å) 主引用文献 Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP. Nat.Struct.Mol.Biol., 20, 2013
6E8M	Legionella Longbeachae LeSH (Llo2327) bound to the human DnaJ-A1 pTyr381 peptide 分子名称: DnaJ-A1 pTyr381 peptide, LeSH (Llo2327) 著者 Kaneko, T, Li, S.S.C. 登録日 2018-07-30 公開日 2018-11-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Identification and characterization of a large family of superbinding bacterial SH2 domains. Nat Commun, 9, 2018
2Y4T	Crystal structure of the human co-chaperone P58(IPK) 分子名称: DNAJ HOMOLOG SUBFAMILY C MEMBER 3 著者 Svard, M, Biterova, E.I, Bourhis, J.-M, Guy, J.E. 登録日 2011-01-10 公開日 2011-08-10 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The Crystal Structure of the Human Co-Chaperone P58Ipk Plos One, 6, 2011
4URL	Crystal Structure of Staph ParE43kDa in complex with KBD 分子名称: (1R,4aS,5S,6S,8aR)-5-{[(5S)-1-(3-O-acetyl-4-O-carbamoyl-6-deoxy-2-O-methyl-alpha-L-talopyranosyl)-4-hydroxy-2-oxo-5-(propan-2-yl)-2,5-dihydro-1H-pyrrol-3-yl]carbonyl}-6-methyl-4-methylidene-1,2,3,4,4a,5,6,8a-octahydronaphthalen-1-yl 2,6-dideoxy-3-C-[(1S)-1-{[(3,4-dichloro-5-methyl-1H-pyrrol-2-yl)carbonyl]amino}ethyl]-beta-D-ribo-hexopyranoside, DNA TOPOISOMERASE IV, B SUBUNIT 著者 Lu, J, Patel, S, Sharma, N, Soisson, S, Kishii, R, Takei, M, Fukuda, Y, Lumb, K.J, Singh, S.B. 登録日 2014-06-30 公開日 2014-07-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode. Acs Chem.Biol., 9, 2014
8BVW	RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W) 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. 登録日 2022-12-20 公開日 2023-05-03 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
5CRO	REFINED STRUCTURE OF CRO REPRESSOR PROTEIN FROM BACTERIOPHAGE LAMBDA 分子名称: CRO REPRESSOR PROTEIN, PHOSPHATE ION 著者 Ohlendorf, D.H, Tronrud, D.E, Matthews, B.W. 登録日 1998-04-17 公開日 1998-06-17 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Refined structure of Cro repressor protein from bacteriophage lambda suggests both flexibility and plasticity. J.Mol.Biol., 280, 1998
1I6H	RNA POLYMERASE II ELONGATION COMPLEX 分子名称: 5'-D(P*AP*AP*AP*TP*GP*CP*CP*TP*GP*GP*TP*CP*T)-3', 5'-R(P*GP*AP*CP*CP*AP*GP*GP*CP*A)-3', DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, ... 著者 Gnatt, A.L, Cramer, P, Kornberg, R.D. 登録日 2001-03-02 公開日 2001-04-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution. Science, 292, 2001
8GJ1	E. coli clamp loader with open clamp on primed template DNA (form 2) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GJ2	E. coli clamp loader with closed clamp on primed template DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GJ0	E. coli clamp loader with open clamp on primed template DNA (form 1) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
4V1M	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (6.6 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
8GJ3	E. coli clamp loader on primed template DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
1W7A	ATP bound MutS 分子名称: 5'-D(*AP*GP*CP*TP*GP*CP*CP*AP*GP*GP *CP*AP*CP*CP*AP*GP*TP*GP*TP*CP*AP*GP*CP*GP*TP*CP*CP*TP* AP*T)-3', 5'-D(*AP*TP*AP*GP*GP*AP*CP*GP*CP*TP *GP*AP*CP*AP*CP*TP*GP*GP*TP*GP*CP*TP*TP*GP*GP*CP*AP*GP* CP*T)-3', ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Lamers, M.H, Georgijevic, D, Lebbink, J, Winterwerp, H.H.K, Agianian, B, de Wind, N, Sixma, T.K. 登録日 2004-08-31 公開日 2004-09-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 ATP Increases the Affinity between Muts ATPase Domains: Implications for ATP Hydrolysis and Conformational Changes J.Biol.Chem., 279, 2004
8HSR	Thermus thermophilus Rho-engaged RNAP elongation complex (composite structure) 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (31-MER), ... 著者 Murayama, Y, Ehara, H, Sekine, S. 登録日 2022-12-20 公開日 2023-05-03 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of the transcription termination factor Rho engagement with transcribing RNA polymerase from Thermus thermophilus. Sci Adv, 9, 2023
4O0A	Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 分子名称: 5-{4-[({[4-(5-carboxyfuran-2-yl)-2-chlorophenyl]carbonothioyl}amino)methyl]phenyl}-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid, Replication protein A 70 kDa DNA-binding subunit 著者 Feldkamp, M.D, Frank, A.O, Kennedy, J.P, Waterson, A.G, Olejniczak, E.T, Pelz, N.F, Patrone, J.D, Vangamudi, B, Camper, D.V, Rossanese, O.W, Fesik, S.W, Chazin, W.J. 登録日 2013-12-13 公開日 2014-01-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J. Med. Chem., 56, 2013
8HSL	Thermus thermophilus RNA polymerase bound with an inverted Rho hexamer 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ... 著者 Murayama, Y, Ehara, H, Sekine, S. 登録日 2022-12-19 公開日 2023-05-03 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structural basis of the transcription termination factor Rho engagement with transcribing RNA polymerase from Thermus thermophilus. Sci Adv, 9, 2023
3UGP	Crystal structure of RNA-polymerase sigma subunit domain 2 complexed with -10 promoter element ssDNA oligo (TATAAT) 分子名称: 5'-D(*TP*GP*TP*AP*TP*AP*AP*TP*GP*GP*G)-3', POTASSIUM ION, RNA polymerase sigma factor 著者 Feklistov, A, Darst, S.A. 登録日 2011-11-02 公開日 2011-12-07 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.697 Å) 主引用文献 Structural basis for promoter-10 element recognition by the bacterial RNA polymerase sigma subunit. Cell(Cambridge,Mass.), 147, 2011
1HW5	THE CAP/CRP VARIANT T127L/S128A 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR 著者 Chu, S.Y, Tordova, M, Gilliland, G.L, Gorshkova, I, Shi, Y. 登録日 2001-01-09 公開日 2001-01-17 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 The structure of the T127L/S128A mutant of cAMP receptor protein facilitates promoter site binding J.Biol.Chem., 276, 2001
6QVW	Solution structure of the free FOXO1 DNA binding domain 分子名称: Forkhead box protein O1 著者 Psenakova, K, Obsil, T, Veverka, V, Obsilova, V, Kohoutova, K. 登録日 2019-03-05 公開日 2019-09-04 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Forkhead Domains of FOXO Transcription Factors Differ in both Overall Conformation and Dynamics. Cells, 8, 2019
3TQY	Structure of a single-stranded DNA-binding protein (ssb), from Coxiella burnetii 分子名称: Single-stranded DNA-binding protein 著者 Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2011-09-09 公開日 2011-09-21 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.6001 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015

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