PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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2XOG	Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A 分子名称: (2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-N-[[(2S,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-4-HYDROXY-2-(HYDROXYMETHYL)OXOLAN-3-YL]METHYLSULFONYL]-3,4-DIHYDROXY-OXOLANE-2-CARBOXAMIDE, RIBONUCLEASE PANCREATIC 著者 Thiyagarajan, N, Smith, B.D, Raines, R.T, Acharya, K.R. 登録日 2010-08-16 公開日 2011-01-19 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A. FEBS J., 278, 2011
1NW3	Structure of the Catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase 分子名称: ACETATE ION, S-ADENOSYLMETHIONINE, SULFATE ION, ... 著者 Min, J.R, Feng, Q, Li, Z.H, Zhang, Y, Xu, R.M. 登録日 2003-02-05 公開日 2003-03-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the Catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase Cell(Cambridge,Mass.), 112, 2003
4FKY	Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to GTP 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-06-13 公開日 2012-06-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase B from Trypanosma brucei bound to GTP To be Published
3GP9	Crystal structure of the Mimivirus NDK complexed with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase, ... 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2009-03-23 公開日 2009-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
3GPA	Crystal structure of the Mimivirus NDK N62L mutant complexed with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase, ... 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2009-03-23 公開日 2009-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
6ZHY	Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class. 分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (110-MER) Widom 601 sequence, Histone H2A type 1, ... 著者 Bacic, L, Gaullier, G, Deindl, S. 登録日 2020-06-24 公開日 2020-12-23 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch. Cell Rep, 33, 2020
3KXB	Structural characterization of H3K56Q nucleosomes and nucleosomal arrays 分子名称: Histone H2A, Histone H2B 1.1, Histone H3.2, ... 著者 Clark, N.J, Lilyestrom, W.G. 登録日 2009-12-02 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural characterization of H3K56Q nucleosomes and nucleosomal arrays. Biochim.Biophys.Acta, 1799, 2010
1EQZ	X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION 分子名称: 146 NUCLEOTIDES LONG DNA, CACODYLATE ION, CHLORIDE ION, ... 著者 Hanson, B.L, Harp, J.M, Timm, D.E, Bunick, G.J. 登録日 2000-04-06 公開日 2000-04-17 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Asymmetries in the nucleosome core particle at 2.5 A resolution. Acta Crystallogr.,Sect.D, 56, 2000
6UPL	Structure of FACT_subnucleosome complex 2 分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... 著者 Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. 登録日 2019-10-17 公開日 2019-12-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (7.4 Å) 主引用文献 FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
6UPK	Structure of FACT_subnucleosome complex 1 分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... 著者 Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. 登録日 2019-10-17 公開日 2019-12-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
8C4A	Structural and interactional insights into the glideosome-associated connector from Toxoplasma gondii 分子名称: Putative anonymous antigen-1 著者 Kumar, A, Morgan, R.M.L, Matthews, S.J. 登録日 2023-01-03 公開日 2023-07-19 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.675 Å) 主引用文献 Structural and regulatory insights into the glideosome-associated connector from Toxoplasma gondii. Elife, 12, 2023
8CBQ	structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Novacek, J, Veverka, V. 登録日 2023-01-25 公開日 2023-09-06 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8CBN	structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Novacek, J, Veverka, V. 登録日 2023-01-25 公開日 2023-12-27 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.34 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
4FKX	Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to CDP 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-06-13 公開日 2012-06-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to CDP To be Published
6ODL	Crystal structure of GluN2A agonist binding domain with 4-butyl-(S)-CCG-IV 分子名称: (1S,2R)-2-[(S)-amino(carboxy)methyl]-1-butylcyclopropane-1-carboxylic acid, Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, ... 著者 Mou, T.C, Clausen, R.P, Sprang, S.R, Hansen, K.B. 登録日 2019-03-26 公開日 2020-04-01 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Stereoselective synthesis of novel 2'-(S)-CCG-IV analogues as potent NMDA receptor agonists. Eur.J.Med.Chem., 212, 2021
3KWQ	Structural characterization of H3K56Q nucleosomes and nucleosomal arrays 分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ... 著者 Lilyestrom, W.G, Clark, N. 登録日 2009-12-01 公開日 2010-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural characterization of H3K56Q nucleosomes and nucleosomal arrays. Biochim.Biophys.Acta, 1799
3MPD	Crystal structure of nucleoside diphosphate kinase from encephalitozoon cuniculi, cubic form, apo 分子名称: 1,2-ETHANEDIOL, Nucleoside diphosphate kinase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-04-26 公開日 2010-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase from encephalitozoon cuniculi To be published
1F66	2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z 分子名称: HISTONE H2A.Z, HISTONE H2B, HISTONE H3, ... 著者 Suto, R.K, Clarkson, M.J, Tremethick, D.J, Luger, K. 登録日 2000-06-20 公開日 2000-11-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of a nucleosome core particle containing the variant histone H2A.Z. Nat.Struct.Biol., 7, 2000
1LPW	Solution structure of the yeast spliceosomal U2 snRNA-intron branch site helix featuring a conserved pseudouridine 分子名称: 5'-R(*GP*GP*UP*GP*(PSU)P*AP*GP*UP*A)-3', 5'-R(*UP*AP*CP*UP*AP*AP*CP*AP*CP*C)-3' 著者 Newby, M.I, Greenbaum, N.L. 登録日 2002-05-08 公開日 2002-11-27 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Sculpting of the Spliceosomal Branch Site Recognition Motif by a Conserved Pseudouridine Nat.Struct.Biol., 12, 2002
1N1O	Crystal Structure of a B-form DNA Duplex Containing (L)-alpha-threofuranosyl (3'-2') Nucleosides: A Four-Carbon Sugar is Easily Accommodated into the Backbone of DNA 分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*(TFT)P*TP*CP*GP*CP*G)-3', MAGNESIUM ION 著者 Wilds, C.J, Wawrzak, Z, Krishnamurthy, R, Eschenmoser, A, Egli, M. 登録日 2002-10-18 公開日 2002-11-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal Structure of a B-Form DNA Duplex Containing (L)-alpha-Threofuranosyl (3'-->2') Nucleosides: A Four-Carbon Sugar Is Easily Accommodated into the Backbone of DNA J.Am.Chem.Soc., 124, 2002
6UXW	SWI/SNF nucleosome complex with ADP-BeFx 分子名称: 601 sequence bottom strand, 601 sequence top strand, ADENOSINE-5'-DIPHOSPHATE, ... 著者 He, Y, Han, Y. 登録日 2019-11-08 公開日 2020-03-18 最終更新日 2025-05-21 実験手法 ELECTRON MICROSCOPY (8.96 Å) 主引用文献 Cryo-EM structure of SWI/SNF complex bound to a nucleosome. Nature, 579, 2020
6VEN	Yeast COMPASS in complex with a ubiquitinated nucleosome 分子名称: 601 DNA (146-MER), COMPASS component BRE2, COMPASS component SDC1, ... 著者 Worden, E.J, Wolberger, C. 登録日 2020-01-02 公開日 2020-01-15 最終更新日 2024-11-20 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome. Elife, 9, 2020
8CTM	Crystal structure of the nucleoside hydrolase from Leishmania donovani. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... 著者 Chen, Y, Tolbert, W.D, Pazgier, M. 登録日 2022-05-16 公開日 2023-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Crystal structure of the nucleoside hydrolase from Leishmania donovani. To Be Published
6ZN3	Plasmodium facliparum glideosome trimeric sub-complex 分子名称: Myosin A tail domain interacting protein, Myosin essential light chain ELC, Myosin-A 著者 Pazicky, S, Loew, C. 登録日 2020-07-06 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structural role of essential light chains in the apicomplexan glideosome. Commun Biol, 3, 2020
7U0G	structure of LIN28b nucleosome bound 3 OCT4 分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ... 著者 Lian, T, Guan, R, Bai, Y. 登録日 2022-02-18 公開日 2023-06-28 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural mechanism of LIN28B nucleosome targeting by OCT4. Mol.Cell, 83, 2023

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