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1EEG
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A(GGGG)A HEXAD PAIRING ALIGMENT FOR THE D(G-G-A-G-G-A-G) SEQUENCE
分子名称: DNA (5'-D(*GP*GP*AP*GP*GP*A)-3')
著者Kettani, A, Gorin, A, Majumdar, A, Hermann, T, Skripkin, E, Zhao, H, Jones, R, Patel, D.J.
登録日2000-01-31
公開日2000-04-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A dimeric DNA interface stabilized by stacked A.(G.G.G.G).A hexads and coordinated monovalent cations.
J.Mol.Biol., 297, 2000
8CGM
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BU of 8cgm by Molmil
Structure of the lipoprotein transporter LolA from Porphyromonas gingivalis
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Persson, K, Jaiman, D, Nagampalli, R.
登録日2023-02-06
公開日2023-06-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A comparative analysis of lipoprotein transport proteins: LolA and LolB from Vibrio cholerae and LolA from Porphyromonas gingivalis.
Sci Rep, 13, 2023
1EF7
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CRYSTAL STRUCTURE OF HUMAN CATHEPSIN X
分子名称: CATHEPSIN X
著者Guncar, G, Klemencic, I, Turk, B, Turk, V, Karaoglanovic-Carmona, A, Juliano, L, Turk, D.
登録日2000-02-07
公開日2000-03-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Crystal structure of cathepsin X: a flip-flop of the ring of His23 allows carboxy-monopeptidase and carboxy-dipeptidase activity of the protease.
Structure Fold.Des., 8, 2000
8C9N
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BU of 8c9n by Molmil
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle
分子名称: Penton protein
著者Bufton, J.C, Capin, J, Boruku, U, Garzoni, F, Schaffitzel, C, Berger, I.
登録日2023-01-23
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献In vitro generated antibodies guide thermostable ADDomer nanoparticle design for nasal vaccination and passive immunization against SARS-CoV-2.
Antib Ther, 6, 2023
6MSF
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BU of 6msf by Molmil
F6 APTAMER MS2 COAT PROTEIN COMPLEX
分子名称: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3')
著者Convery, M.A, Rowsell, S, Stonehouse, N.J, Ellington, A.D, Hirao, I, Murray, J.B, Peabody, D.S, Phillips, S.E.V, Stockley, P.G.
登録日1998-01-06
公開日1998-07-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nat.Struct.Biol., 5, 1998
7WNR
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BU of 7wnr by Molmil
Data-driven HADDOCK model of mycobacterial nMazE6-operator DNA complex
分子名称: Antitoxin MazE6, DNA (5'-D(P*CP*CP*GP*GP*TP*TP*AP*TP*AP*CP*TP*AP*TP*CP*TP*GP*TP*A)-3'), DNA (5'-D(P*TP*AP*CP*AP*GP*AP*TP*AP*GP*TP*AP*TP*AP*AP*CP*CP*GP*G)-3')
著者Kumari, K, Sarma, S.P.
登録日2022-01-19
公開日2022-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and mutational analysis of MazE6-operator DNA complex provide insights into autoregulation of toxin-antitoxin systems.
Commun Biol, 5, 2022
7WJ0
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BU of 7wj0 by Molmil
Solution structure of N-terminal domain (nMazE6) of mycobacterial antitoxin MazE6 from MazEF6 TA system
分子名称: Antitoxin MazE6
著者Kumari, K, Sarma, S.P.
登録日2022-01-05
公開日2022-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and mutational analysis of MazE6-operator DNA complex provide insights into autoregulation of toxin-antitoxin systems.
Commun Biol, 5, 2022
2RC3
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BU of 2rc3 by Molmil
Crystal structure of CBS domain, NE2398
分子名称: BROMIDE ION, CBS domain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Dong, A, Xu, X, Korniyenko, Y, Yakunin, A, Zheng, H, Walker, J.R, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-09-19
公開日2007-10-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of CBS domain, NE2398.
To be Published
2R9G
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BU of 2r9g by Molmil
Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium
分子名称: AAA ATPase, central region, ACETATE ION, ...
著者Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Shi, W, Toro, R, Meyer, A.J, Rutter, M, Wu, B, Groshong, C, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-09-12
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal Structure of the C-Terminal Domain of AAA ATPase from Enterococcus faecium.
To be Published
2REX
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BU of 2rex by Molmil
Crystal structure of the effector domain of PLXNB1 bound with Rnd1 GTPase
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Tong, Y, Tempel, W, Shen, L, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2007-09-27
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the effector domain of PLXNB1 bound with Rnd1 GTPase.
To be Published
4V4J
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BU of 4v4j by Molmil
Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.
分子名称: 16S RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ...
著者Korostelev, A, Trakhanov, S, Asahara, H, Laurberg, M, Noller, H.F.
登録日2007-07-18
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.83 Å)
主引用文献Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6Y1H
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BU of 6y1h by Molmil
Major subunit ComGC from S. pneumoniae Com pseudopili
分子名称: Competence protein
著者Sheppard, D, Berry, J.L, Matthews, S.J, Pelicic, V.
登録日2020-02-12
公開日2020-04-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold.
J.Biol.Chem., 295, 2020
5Z26
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BU of 5z26 by Molmil
solution structure of SMAP-18
分子名称: SMAP-18
著者Jung, B, Lee, C.W.
登録日2017-12-29
公開日2019-01-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献solution structure of SMAP-18
To Be Published
4WBC
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BU of 4wbc by Molmil
2.13 A STRUCTURE OF A KUNITZ-TYPE WINGED BEAN CHYMOTRYPSIN INHIBITOR PROTEIN
分子名称: PROTEIN (CHYMOTRYPSIN INHIBITOR), SULFATE ION
著者Ravichandran, S, Sen, U, Chakrabarti, C, Dattagupta, J.K.
登録日1999-03-04
公開日1999-03-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.138 Å)
主引用文献Cryocrystallography of a Kunitz-type serine protease inhibitor: the 90 K structure of winged bean chymotrypsin inhibitor (WCI) at 2.13 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
6R95
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BU of 6r95 by Molmil
The solution NMR structure of cis-dicarba-brevinin-1BYa in 33% trifluoroethanol
分子名称: Brevinin-1BYa
著者Timmons, P.B, O'Flynn, D.P, Conlon, J.M, Hewage, C.M.
登録日2019-04-02
公開日2019-09-25
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Insights into conformation and membrane interactions of the acyclic and dicarba-bridged brevinin-1BYa antimicrobial peptides.
Eur.Biophys.J., 48, 2019
6R96
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The solution NMR structure of cis-dicarba-brevinin-1BYa in sodium dodecyl sulphate micelles
分子名称: Brevinin-1BYa
著者Timmons, P.B, O'Flynn, D.P, Conlon, J.M, Hewage, C.M.
登録日2019-04-02
公開日2019-09-25
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Insights into conformation and membrane interactions of the acyclic and dicarba-bridged brevinin-1BYa antimicrobial peptides.
Eur.Biophys.J., 48, 2019
6RVV
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BU of 6rvv by Molmil
Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
分子名称: GOLD ION, Transcription attenuation protein MtrB
著者Malay, A.D, Miyazaki, N, Biela, A.P, Iwasaki, K, Heddle, J.G.
登録日2019-06-03
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献An ultra-stable gold-coordinated protein cage displaying reversible assembly.
Nature, 569, 2019
6FE6
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BU of 6fe6 by Molmil
Solution structure of a last generation P2-P4 macrocyclic inhibitor
分子名称: (3aR,7S,10S,12R,24aR)-7-cyclopentyl-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-5,8-dioxo-1,2,3,3a,5,6,7,8,11,12,20,21,22,23,24,24a-hexadecahydro-10H-9,12-methanocyclopenta[18,19][1,10,3,6]dioxadiazacyclononadecino[12,11-b]quinoline-10-carboxamide, Non-structural 3 protease, ZINC ION
著者Gallo, M, Eliseo, T, Cicero, D.O.
登録日2017-12-29
公開日2019-01-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a last generation macrocyclic inhibitor. Hepatitis C virus NS3 protease complex: when S prime region occupancy is not enough to stabilize the protein conformation in the absence of NS4A.
To Be Published
6TXT
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BU of 6txt by Molmil
Major subunit ComGC from S. sanguinis Com pseudopili
分子名称: Competence pilin-like protein ComGC
著者Sheppard, D, Berry, J.L, Matthews, S.J, Pelicic, V.
登録日2020-01-14
公開日2020-04-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold.
J.Biol.Chem., 295, 2020
5MWW
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BU of 5mww by Molmil
Sigma1.1 domain of sigmaA from Bacillus subtilis
分子名称: RNA polymerase sigma factor SigA
著者Zachrdla, M, Padrta, P, Rabatinova, A, Sanderova, H, Barvik, I, Krasny, L, Zidek, L.
登録日2017-01-20
公開日2017-06-14
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of domain 1.1 of the sigma (A) factor from Bacillus subtilis is preformed for binding to the RNA polymerase core.
J. Biol. Chem., 292, 2017
7JK9
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BU of 7jk9 by Molmil
Helical filaments of plant light-dependent protochlorophyllide oxidoreductase (LPOR) bound to NADPH, Pchlide, and membrane
分子名称: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protochlorophyllide, ...
著者Nguyen, H.C, Gabruk, M, Frost, A.
登録日2020-07-28
公開日2021-03-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Photocatalytic LPOR forms helical lattices that shape membranes for chlorophyll synthesis.
Nat.Plants, 7, 2021
7HBI
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BU of 7hbi by Molmil
SCAPHARCA DIMERIC HEMOGLOBIN, MUTANT T72V, CO-LIGANDED FORM
分子名称: CARBON MONOXIDE, HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者Royer Junior, W.E.
登録日1998-06-25
公開日1998-11-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mutational destabilization of the critical interface water cluster in Scapharca dimeric hemoglobin: structural basis for altered allosteric activity.
J.Mol.Biol., 284, 1998
8PXS
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BU of 8pxs by Molmil
Short RNA binding to peptide amyloids
分子名称: RNA (5'-R(P*GP*UP*CP*A)-3'), VAL-ALA-GLN-ALA-GLN-ILE-ASN-ILE
著者Rout, S.K, Cadalbert, R, Schroder, N, Wiegand, T, Zehnder, J, Gampp, O, Guntert, P, Kringler, D, Kreutz, C, Knorlein, A, Hall, J, Greenwald, J, Riek, R.
登録日2023-07-24
公開日2023-10-18
実験手法SOLID-STATE NMR
主引用文献An Analysis of Nucleotide-Amyloid Interactions Reveals Selective Binding to Codon-Sized RNA.
J.Am.Chem.Soc., 145, 2023
3M0W
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BU of 3m0w by Molmil
Structure of S100A4 with PCP
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine, CALCIUM ION, ...
著者Ramagopal, U.A, Dulyaninova, N.G, Almo, S.C, Bresnick, A.R.
登録日2010-03-03
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of S100A4 with PCP
To be published
3M1R
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The crystal structure of formimidoylglutamase from Bacillus subtilis subsp. subtilis str. 168
分子名称: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Tan, K, Bigelow, L, Trevino, D, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-03-05
公開日2010-03-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献The crystal structure of formimidoylglutamase from Bacillus subtilis subsp. subtilis str. 168
To be Published

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