Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7UR6
DownloadVisualize
BU of 7ur6 by Molmil
Cryo-EM structure of SHIV-elicited, FP-directed Rhesus Fab RM6561.DH1021.14 in complex with stabilized HIV-1 Env Ce1176 DS-SOSIP.664
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain, ...
著者Gorman, J, Kwong, P.D.
登録日2022-04-21
公開日2023-04-26
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Cryo-EM structure of SHIV-elicited, FP-directed Rhesus Fab RM6561.DH1021.14 in complex with stabilized HIV-1 Env Ce1176 DS-SOSIP.664
To Be Published
7CWE
DownloadVisualize
BU of 7cwe by Molmil
Human Fructose-1,6-bisphosphatase 1 in APO R-state
分子名称: Fructose-1,6-bisphosphatase 1, MAGNESIUM ION
著者Chen, Y, Zhang, J, Li, C, Cao, Y.
登録日2020-08-28
公開日2021-09-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Human Fructose-1,6-bisphosphatase 1 in APO R-state
To Be Published
5WN4
DownloadVisualize
BU of 5wn4 by Molmil
APE1 exonuclease substrate complex with a C/T mismatch
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Freudenthal, B.D, Whitaker, A.M.
登録日2017-07-31
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular snapshots of APE1 proofreading mismatches and removing DNA damage.
Nat Commun, 9, 2018
4BTK
DownloadVisualize
BU of 4btk by Molmil
TTBK1 in complex with inhibitor
分子名称: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, DIMETHYL SULFOXIDE, TAU-TUBULIN KINASE 1
著者Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
登録日2013-06-18
公開日2013-09-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
7G0P
DownloadVisualize
BU of 7g0p by Molmil
Crystal Structure of human FABP4 in complex with 3-[(4-phenyl-5-sulfanylidene-1,3,4-thiadiazol-2-yl)sulfanyl]propane-1-sulfonic acid, i.e. SMILES N1(c2ccccc2)C(=S)SC(=N1)SCCCS(=O)(=O)O with IC50=5.6 microM
分子名称: 1,2-ETHANEDIOL, 3-[(4-phenyl-5-sulfanylidene-4,5-dihydro-1,3,4-thiadiazol-2-yl)sulfanyl]propane-1-sulfonic acid, FORMIC ACID, ...
著者Ehler, A, Benz, J, Obst, U, Kumagai, Y, Rudolph, M.G.
登録日2023-04-27
公開日2023-06-14
最終更新日2025-08-13
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献A high-resolution data set of fatty acid-binding protein structures. III. Unexpectedly high occurrence of wrong ligands.
Acta Crystallogr D Struct Biol, 81, 2025
6BMX
DownloadVisualize
BU of 6bmx by Molmil
Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor SHP844
分子名称: 1-(3-chloro-4-{[1-(2-hydroxy-3-methoxyphenyl)-5-oxo[1,2,4]triazolo[4,3-a]quinazolin-4(5H)-yl]methyl}benzene-1-carbonyl)-L-proline, GLYCEROL, PHOSPHATE ION, ...
著者Stams, T, Fodor, M.
登録日2017-11-15
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.424 Å)
主引用文献Dual Allosteric Inhibition of SHP2 Phosphatase.
ACS Chem. Biol., 13, 2018
9ELH
DownloadVisualize
BU of 9elh by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein (one RBD up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELE
DownloadVisualize
BU of 9ele by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 RBD in complex with human ACE2 (local refinement of RBD and hACE2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELF
DownloadVisualize
BU of 9elf by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein in complex with human ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
4Y76
DownloadVisualize
BU of 4y76 by Molmil
Factor Xa complex with GTC000401
分子名称: CALCIUM ION, Coagulation factor X, N~2~-[(6-chloronaphthalen-2-yl)sulfonyl]-N~2~-{(3S)-1-[(2S)-1-(4-methyl-1,4-diazepan-1-yl)-1-oxopropan-2-yl]-2-oxopyrrolidin-3-yl}glycinamide
著者Convery, M.A, Young, R.J, Senger, S, Hamblin, J.N, Chan, C, Toomey, J.R, Watson, N.S.
登録日2015-02-13
公開日2015-09-30
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Factor Xa inhibitors: S1 binding interactions of a series of N-{(3S)-1-[(1S)-1-methyl-2-morpholin-4-yl-2-oxoethyl]-2-oxopyrrolidin-3-yl}sulfonamides.
J. Med. Chem., 50, 2007
9ELO
DownloadVisualize
BU of 9elo by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+S31 deletion spike protein (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
4CDM
DownloadVisualize
BU of 4cdm by Molmil
Crystal structure of M. mazei photolyase soaked with synthetic 8-HDF
分子名称: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, DEOXYRIBODIPYRIMIDINE PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kiontke, S, Batschauer, A, Essen, L.-O.
登録日2013-11-01
公開日2014-05-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Evolutionary Aspects of Antenna Chromophore Usage by Class II Photolyases.
J.Biol.Chem., 289, 2014
9ELI
DownloadVisualize
BU of 9eli by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELN
DownloadVisualize
BU of 9eln by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+S31 deletion spike protein (one RBD up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELP
DownloadVisualize
BU of 9elp by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11.1+S31 deletion spike protein (one RBD up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELQ
DownloadVisualize
BU of 9elq by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11.1+S31 deletion spike protein (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-05-28
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELL
DownloadVisualize
BU of 9ell by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11 spike protein (one RBD up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-06-04
最終更新日2025-08-27
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELJ
DownloadVisualize
BU of 9elj by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+Q493E+S31deletion spike protein (one RBD up state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-06-04
最終更新日2025-08-27
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELK
DownloadVisualize
BU of 9elk by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+Q493E+S31deletion spike protein (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-06-04
最終更新日2025-08-27
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
9ELM
DownloadVisualize
BU of 9elm by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11 spike protein (closed state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Feng, Z, Huang, J, Ward, A.B.
登録日2024-12-04
公開日2025-06-04
最終更新日2025-08-27
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structural and functional insights into the evolution of SARS-CoV-2 KP.3.1.1 spike protein.
Cell Rep, 44, 2025
6T5A
DownloadVisualize
BU of 6t5a by Molmil
Crystal structure of herpes simplex virus 1 pUL7:pUL51 complex
分子名称: CHLORIDE ION, Cytoplasmic envelopment protein 1, GLYCEROL, ...
著者Butt, B.G, Graham, S.C.
登録日2019-10-15
公開日2020-05-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Insights into herpesvirus assembly from the structure of the pUL7:pUL51 complex.
Elife, 9, 2020
1QGM
DownloadVisualize
BU of 1qgm by Molmil
THE SOLUTION STRUCTURE OF A 30 RESIDUE AMINO-TERMINAL DOMAIN OF THE CARP GRANULIN-1 PROTEIN.
分子名称: PROTEIN (AMINO-TERMINAL CARP GRANULIN-1)
著者Vranken, W.F, Xu, P, Ni, F.
登録日1999-05-01
公開日1999-12-22
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献A 30-residue fragment of the carp granulin-1 protein folds into a stack of two beta-hairpins similar to that found in the native protein.
J.Pept.Res., 53, 1999
6TCC
DownloadVisualize
BU of 6tcc by Molmil
Crystal structure of Salmo salar RidA-1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ricagno, S, Visentin, C, Di Pisa, F, Digiovanni, S, Oberti, L, Degani, G, Popolo, L, Bartorelli, A.
登録日2019-11-05
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Two novel fish paralogs provide insights into the Rid family of imine deaminases active in pre-empting enamine/imine metabolic damage.
Sci Rep, 10, 2020
6F83
DownloadVisualize
BU of 6f83 by Molmil
Crystal Structure of Human Galectin-1 in Complex With Thienyl-1,2, 3-triazolyl Thiodigalactoside Inhibitor
分子名称: 3-deoxy-3-[4-(thiophen-3-yl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-1-thio-3-[4-(thiophen-3-yl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranoside, Galectin-1
著者Collins, P.M, Blanchard, H.
登録日2017-12-12
公開日2019-01-30
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Aromatic heterocycle galectin-1 interactions for selective single-digit nM affinity ligands
To be published
5CYM
DownloadVisualize
BU of 5cym by Molmil
HIV-1 reverse transcriptase complexed with 4-iodopyrazole
分子名称: 1,2-ETHANEDIOL, 4-IODOPYRAZOLE, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
著者Bauman, J.D, Arnold, E.
登録日2015-07-30
公開日2015-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Rapid experimental SAD phasing and hot spot identification with halogenated fragments
Iucrj, 3, 2016

243531

件を2025-10-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon