PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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5YDU	Crystal structure of Utp30 分子名称: PHOSPHATE ION, Ribosome biogenesis protein UTP30 著者 Hu, J, Zhu, X, Ye, K. 登録日 2017-09-14 公開日 2017-11-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.646 Å) 主引用文献 Structure and RNA recognition of ribosome assembly factor Utp30. RNA, 23, 2017
7SF1	SARS-CoV-2 Main Protease (Mpro) in Complex with ML1001 分子名称: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(3,3-dimethylbutanoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase 著者 Westberg, M, Fernandez, D, Lin, M.Z. 登録日 2021-10-02 公開日 2022-10-05 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 An orally bioavailable SARS-CoV-2 main protease inhibitor exhibits improved affinity and reduced sensitivity to mutations. Sci Transl Med, 16, 2024
2BKL	Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Inter-Domain Dynamics in Catalysis and Specificity 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, N-[(BENZYLOXY)CARBONYL]-L-ALANYL-L-PROLINE, PROLYL ENDOPEPTIDASE, ... 著者 Khosla, C, Shan, L, Mathews, I.I. 登録日 2005-02-16 公開日 2005-03-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Interdomain Dynamics in Catalysis and Specificity Proc.Natl.Acad.Sci.USA, 102, 2005
3FN4	Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation 分子名称: GLYCEROL, NAD-dependent formate dehydrogenase, SULFATE ION 著者 Shabalin, I.G, Polyakov, K.M, Filippova, E.V, Dorovatovskiy, P.V, Tikhonova, T.V, Sadykhov, E.G, Tishkov, V.I, Popov, V.O. 登録日 2008-12-23 公開日 2009-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft Acta Crystallogr.,Sect.D, 65, 2009
4LMK	GLIC Liganded-closed-channel Conformation, Mutant Y27'A 分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ... 著者 Grosman, C, Gonzalez-Gutierrez, G. 登録日 2013-07-10 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Gating of the proton-gated ion channel from Gloeobacter violaceus at pH 4 as revealed by X-ray crystallography. Proc.Natl.Acad.Sci.USA, 110, 2013
7S8U	Cryo-EM structure of a mammalian peptide transporter (PepT1/slc15a1) in nanodisc 分子名称: Solute carrier family 15 member 1 著者 Shen, J, Zhou, M. 登録日 2021-09-19 公開日 2022-07-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Extracellular domain of PepT1 interacts with TM1 to facilitate substrate transport. Structure, 30, 2022
7SHJ	Crystal structure of Acinetobacter baumannii ZnuA in the metal-free state 分子名称: SODIUM ION, Zinc ABC transporter solute-binding protein 著者 Luo, Z, McDevitt, C.A, Kobe, B. 登録日 2021-10-09 公開日 2022-10-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Structural and biochemical characterization of Acinetobacter baumannii ZnuA. J.Inorg.Biochem., 231, 2022
7W5B	The cryo-EM structure of human C* complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
7W5A	The cryo-EM structure of human pre-C*-II complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
6MVS	Structure of a bacterial ALDH16 complexed with NAD 分子名称: Aldehyde dehydrogenase, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Tanner, J.J, Liu, L. 登録日 2018-10-28 公開日 2018-12-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer. J. Mol. Biol., 431, 2019
5YPP	Crystal structure of IlvN.Val-1a 分子名称: ACETATE ION, Acetolactate synthase isozyme 1 small subunit, DI(HYDROXYETHYL)ETHER, ... 著者 Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. 登録日 2017-11-02 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
3A43	Crystal structure of HypA 分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION 著者 Watanabe, S, Arai, T, Matsumi, R, Aromi, H, Imanaka, T, Miki, K. 登録日 2009-06-30 公開日 2009-10-06 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation. J.Mol.Biol., 394, 2009
5C5K	Structure of the Pfr form of a canonical phytochrome 分子名称: 1,2-ETHANEDIOL, ACETATE ION, BILIVERDINE IX ALPHA, ... 著者 Burgie, E.S, Vierstra, R.D. 登録日 2015-06-20 公開日 2016-02-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion. Structure, 24, 2016
4LMJ	GLIC Liganded-closed-channel Conformation, Mutant T25'A 分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ... 著者 Grosman, C, Gonzalez-Gutierrez, G. 登録日 2013-07-10 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.44 Å) 主引用文献 Gating of the proton-gated ion channel from Gloeobacter violaceus at pH 4 as revealed by X-ray crystallography. Proc.Natl.Acad.Sci.USA, 110, 2013
3EW1	Crystal structure of rhizavidin 分子名称: rhizavidin 著者 Livnah, O, Meir, A. 登録日 2008-10-14 公開日 2008-12-23 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer. J.Mol.Biol., 386, 2009
3F72	Crystal Structure of the Staphylococcus aureus pI258 CadC Metal Binding Site 2 Mutant 分子名称: Cadmium efflux system accessory protein, SODIUM ION 著者 Kandegedara, A, Thiyagarajan, S, Kondapalli, K.C, Stemmler, T.L, Rosen, B.P. 登録日 2008-11-07 公開日 2009-04-07 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Role of bound Zn(II) in the CadC Cd(II)/Pb(II)/Zn(II)-responsive repressor. J.Biol.Chem., 284, 2009
3ADG	Structure of Arabidopsis HYL1 and its molecular implications for miRNA processing 分子名称: F21M12.9 protein 著者 Yuan, Y.A, Chen, H.Y. 登録日 2010-01-22 公開日 2010-05-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of arabidopsis HYPONASTIC LEAVES1 and its molecular implications for miRNA processing Structure, 18, 2010
3ADJ	Structure of Arabidopsis HYL1 and its molecular implications for miRNA processing 分子名称: F21M12.9 protein 著者 Yuan, Y.A, Chen, H.Y. 登録日 2010-01-22 公開日 2010-05-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of arabidopsis HYPONASTIC LEAVES1 and its molecular implications for miRNA processing Structure, 18, 2010
1F93	CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE DIMERIZATION DOMAIN OF HNF-1 ALPHA AND THE COACTIVATOR DCOH 分子名称: DIMERIZATION COFACTOR OF HEPATOCYTE NUCLEAR FACTOR 1-ALPHA, HEPATOCYTE NUCLEAR FACTOR 1-ALPHA 著者 Rose, R.B, Bayle, J.H, Endrizzi, J.A, Cronk, J.D, Crabtree, G.R, Alber, T. 登録日 2000-07-06 公開日 2000-09-20 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis of dimerization, coactivator recognition and MODY3 mutations in HNF-1alpha. Nat.Struct.Biol., 7, 2000
3IX0	Crystal structure of human seminal plasma protein PSP94 分子名称: Beta-microseminoprotein 著者 Kumar, M, Kumar, A, Jagtap, D.D, Mahale, S.D. 登録日 2009-09-03 公開日 2010-03-16 最終更新日 2014-02-05 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of prostate secretory protein PSP94 shows an edge-to-edge association of two monomers to form a homodimer J.Mol.Biol., 397, 2010
5YPW	Crystal structure of IlvN.Val-1b 分子名称: Acetolactate synthase isozyme 1 small subunit, VALINE 著者 Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. 登録日 2017-11-03 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
5YR0	Structure of Beclin1-UVRAG coiled coil domain complex 分子名称: Beclin-1, UV radiation resistance associated protein 著者 Pan, X, Zhao, Y, He, Y. 登録日 2017-11-08 公開日 2018-06-13 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Targeting the potent Beclin 1-UVRAG coiled-coil interaction with designed peptides enhances autophagy and endolysosomal trafficking. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3KG0	Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.7 resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SnoaB 著者 Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G. 登録日 2009-10-28 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism Biochemistry, 49, 2010
4LML	GLIC double mutant I9'A T25'A 分子名称: Proton-gated ion channel 著者 Grosman, C, Gonzalez-Gutierrez, G. 登録日 2013-07-10 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Gating of the proton-gated ion channel from Gloeobacter violaceus at pH 4 as revealed by X-ray crystallography. Proc.Natl.Acad.Sci.USA, 110, 2013
3KJP	Crystal Structure of hPOT1V2-GGTTAGGGTTAG 分子名称: 5'-D(*G*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3', Protection of telomeres protein 1 著者 Nandakumar, J, Cech, T.R, Podell, E.R. 登録日 2009-11-03 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA. Proc.Natl.Acad.Sci.USA, 107, 2010

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