PDB: 194 件ウェブページステータス検索Chemie searchBIRD

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3EVT	Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum 分子名称: Phosphoglycerate dehydrogenase 著者 Bonanno, J.B, Gilmore, M, Bain, K.T, Do, J, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2008-10-13 公開日 2008-10-21 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum To be Published
5AOV	Ternary Crystal Structure of Pyrococcus furiosus Glyoxylate Hydroxypyruvate Reductase in presence of glyoxylate 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, GLYOXYLATE REDUCTASE, ... 著者 Lassalle, L, Girard, E. 登録日 2015-09-12 公開日 2016-03-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 New Insights Into the Mechanism of Substrates Trafficking in Glyoxylate/Hydroxypyruvate Reductases. Sci.Rep., 6, 2016
7JP2	Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D-lactate dehydrogenase 著者 Brautigam, C.A, Deka, R.K, Norgard, M.V. 登録日 2020-08-07 公開日 2020-09-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Biophysical and Biochemical Characterization of TP0037, a d-Lactate Dehydrogenase, Supports an Acetogenic Energy Conservation Pathway in Treponema pallidum. Mbio, 11, 2020
3NAQ	Apo-form of NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana 分子名称: Formate dehydrogenase, SULFATE ION 著者 Shabalin, I.G, Polyakov, K.M, Serov, A.E, Skirgello, O.E, Sadykhov, E.G, Dorovatovskiy, P.V, Tishkov, V.I, Popov, V.O. 登録日 2010-06-02 公開日 2010-07-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana to be published
3N7U	NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana in complex with NAD and azide 分子名称: AZIDE ION, Formate dehydrogenase, GLYCEROL, ... 著者 Shabalin, I.G, Polyakov, K.M, Serov, A.E, Skirgello, O.E, Sadykhov, E.G, Dorovatovskiy, P.V, Tishkov, V.I, Popov, V.O. 登録日 2010-05-27 公開日 2010-06-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana To be Published
6ABI	The apo-structure of D-lactate dehydrogenase from Fusobacterium nucleatum 分子名称: D-lactate dehydrogenase, GLYCEROL, SULFATE ION 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2018-07-21 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria Biochemistry, 57, 2018
6ABJ	The apo-structure of D-lactate dehydrogenase from Pseudomonas aeruginosa 分子名称: ACETATE ION, D-lactate dehydrogenase (Fermentative) 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2018-07-21 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria Biochemistry, 57, 2018
3ORR	Crystal Structure of N5-Carboxyaminoimidazole synthetase from Staphylococcus aureus 分子名称: N5-carboxyaminoimidazole ribonucleotide synthetase 著者 Brugarolas, P, Duguid, E.M, Zhang, W, Poor, C.B, He, C. 登録日 2010-09-07 公開日 2011-07-20 最終更新日 2013-04-24 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural and biochemical characterization of N5-carboxyaminoimidazole ribonucleotide synthetase and N5-carboxyaminoimidazole ribonucleotide mutase from Staphylococcus aureus. Acta Crystallogr.,Sect.D, 67, 2011
3OET	D-Erythronate-4-Phosphate Dehydrogenase complexed with NAD 分子名称: Erythronate-4-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Filippova, E.V, Wawrzak, Z, Onopriyenko, O, Savchenko, A, Edwards, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2010-08-13 公開日 2010-08-25 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 D-Erythronate-4-Phosphate Dehydrogenase complexed with NAD To be Published
3ORQ	Crystal Structure of N5-Carboxyaminoimidazole synthetase from Staphylococcus aureus complexed with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Brugarolas, P, Duguid, E.M, Zhang, W, Poor, C.B, He, C. 登録日 2010-09-07 公開日 2011-07-20 最終更新日 2012-03-28 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural and biochemical characterization of N5-carboxyaminoimidazole ribonucleotide synthetase and N5-carboxyaminoimidazole ribonucleotide mutase from Staphylococcus aureus. Acta Crystallogr.,Sect.D, 67, 2011
3GA0	CtBP1/BARS Gly172->Glu mutant structure: impairing NAD(H) binding and dimerization 分子名称: C-terminal-binding protein 1, FORMIC ACID 著者 Nardini, M, Valente, C, Ricagno, S, Luini, A, Corda, D, Bolognesi, M. 登録日 2009-02-16 公開日 2009-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 CtBP1/BARS Gly172-->Glu mutant structure: impairing NAD(H)-binding and dimerization Biochem.Biophys.Res.Commun., 381, 2009
6PLG	Crystal structure of human PHGDH complexed with Compound 15 分子名称: (2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid, D-3-phosphoglycerate dehydrogenase, D-MALATE 著者 Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K. 登録日 2019-06-30 公開日 2019-07-24 最終更新日 2019-09-04 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells. Bioorg.Med.Chem.Lett., 29, 2019
6PEX	An aldo keto reductase with 2-keto- L-gulonate reductase activity 分子名称: aldo keto reductase 著者 Yong, J, Crystal, S, Robert, D.H, John, B.B. 登録日 2019-06-21 公開日 2019-09-11 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.581 Å) 主引用文献 An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C inVitis vinifera. J.Biol.Chem., 294, 2019
6PLF	Crystal structure of human PHGDH complexed with Compound 1 分子名称: 1,2-ETHANEDIOL, 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid, D-3-phosphoglycerate dehydrogenase 著者 Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K. 登録日 2019-06-30 公開日 2019-07-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells. Bioorg.Med.Chem.Lett., 29, 2019
6BII	Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW) 分子名称: GLYCEROL, Glyoxylate reductase, MALONATE ION, ... 著者 Lassalle, L, Shabalin, I.G, Girard, E, Minor, W. 登録日 2017-11-02 公開日 2018-01-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases. Sci Rep, 6, 2016
6CDF	Human CtBP1 (28-378) 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C-terminal-binding protein 1, CALCIUM ION, ... 著者 Royer, W.E, Bellesis, A.G. 登録日 2018-02-08 公開日 2018-05-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Assembly of human C-terminal binding protein (CtBP) into tetramers. J. Biol. Chem., 293, 2018
6CDR	Human CtBP1 (28-378) 分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C-terminal-binding protein 1, ... 著者 Royer, W.E, Bellesis, A.G. 登録日 2018-02-09 公開日 2018-05-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.399 Å) 主引用文献 Assembly of human C-terminal binding protein (CtBP) into tetramers. J. Biol. Chem., 293, 2018
6CWA	CRYSTAL STRUCTURE PHGDH IN COMPLEX WITH NADH AND 3-PHOSPHOGLYCERATE AT 1.77 A RESOLUTION 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-PHOSPHOGLYCERIC ACID, D-3-phosphoglycerate dehydrogenase 著者 Davies, D.R, Edwards, T.E. 登録日 2018-03-30 公開日 2019-08-07 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Intracellular Trapping of the Selective Phosphoglycerate Dehydrogenase (PHGDH) InhibitorBI-4924Disrupts Serine Biosynthesis. J.Med.Chem., 62, 2019
6D4B	Crystal structure of Candida boidinii formate dehydrogenase V123A mutant complexed with NAD+ and azide 分子名称: AZIDE ION, CHLORIDE ION, Formate dehydrogenase, ... 著者 Guo, Q, Ye, H, Gakhar, L, Cheatum, C.M, Kohen, A. 登録日 2018-04-17 公開日 2019-04-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase Acs Catalysis, 2019
6D4C	Crystal structure of Candida boidinii formate dehydrogenase V123G mutant complexed with NAD+ and azide 分子名称: AZIDE ION, CHLORIDE ION, Formate dehydrogenase, ... 著者 Guo, Q, Ye, H, Gakhar, L, Cheatum, C.M, Kohen, A. 登録日 2018-04-17 公開日 2019-04-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase Acs Catalysis, 2019
3GG9	CRYSTAL STRUCTURE OF putative D-3-phosphoglycerate dehydrogenase oxidoreductase from Ralstonia solanacearum 分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ... 著者 Patskovsky, Y, Ramagopal, U, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-02-27 公開日 2009-03-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase from Ralstonia Solanacearum To be Published
2GUG	NAD-dependent formate dehydrogenase from Pseudomonas sp.101 in complex with formate 分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, Formate dehydrogenase, ... 著者 Filippova, E.V, Polyakov, K.M, Tikhonova, T.V, Boiko, K.M, Tishkov, V.I, Popov, V.O. 登録日 2006-04-30 公開日 2006-05-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Crystal structure of the complex of NAD-dependent formate dehydrogenase from metylotrophic bacterium Pseudomonas sp.101 with formate. KRISTALLOGRAFIYA, 51, 2006
2GSD	NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C2 in complex with NAD and azide 分子名称: AZIDE ION, NAD-dependent formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Filippova, E.V, Polyakov, K.M, Tikhonova, T.V, Sadykhov, I.G, Shabalin, I.G, Tishkov, V.I, Popov, V.O. 登録日 2006-04-26 公開日 2006-05-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft. Acta Crystallogr.,Sect.D, 65, 2009
2D0I	Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 分子名称: dehydrogenase 著者 Lokanath, N.K, Terao, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-02 公開日 2006-02-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 To be Published
2GO1	NAD-dependent formate dehydrogenase from Pseudomonas sp.101 分子名称: NAD-dependent formate dehydrogenase, SULFATE ION 著者 Filippova, E.V, Polyakov, K.M, Tikhonova, T.V, Stekhanova, T.N, Boiko, K.M, Popov, V.O. 登録日 2006-04-12 公開日 2006-05-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of a new crystal modification of the bacterial NAD-dependent formate dehydrogenase with a resolution of 2.1 A Crystallography reports, 50, 2005

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