PDB: 191 件ウェブページステータス検索Chemie searchBIRD

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5Z21	The ternary structure of D-lactate dehydrogenase from Fusobacterium nucleatum with NADH and oxamate 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase, OXAMIC ACID 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2017-12-28 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry, 57, 2018
3K5P	Crystal structure of amino acid-binding ACT: D-isomer specific 2-hydroxyacid dehydrogenase catalytic domain from Brucella melitensis 分子名称: 1,2-ETHANEDIOL, D-3-phosphoglycerate dehydrogenase, GLYCEROL 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-10-07 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of amino acid-binding ACT: D-isomer specific 2-hydroxyacid dehydrogenase catalytic domain from Brucella melitensis To be Published
5Z1Z	The apo-structure of D-lactate dehydrogenase from Escherichia coli 分子名称: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2017-12-28 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry, 57, 2018
7JP2	Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D-lactate dehydrogenase 著者 Brautigam, C.A, Deka, R.K, Norgard, M.V. 登録日 2020-08-07 公開日 2020-09-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Biophysical and Biochemical Characterization of TP0037, a d-Lactate Dehydrogenase, Supports an Acetogenic Energy Conservation Pathway in Treponema pallidum. Mbio, 11, 2020
8IQ7	Ambient Temperature Crystal Structure of Candida boidinii Formate Dehydrogenase 分子名称: Formate dehydrogenase 著者 Gul, M, DeMirci, H. 登録日 2023-03-16 公開日 2023-03-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography. Acta Crystallogr D Struct Biol, 79, 2023
4NU6	Crystal Structure of PTDH R301K 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphonate dehydrogenase, SULFATE ION 著者 Nair, S.K, Chekan, J.R. 登録日 2013-12-03 公開日 2014-03-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Chemical rescue and inhibition studies to determine the role of arg301 in phosphite dehydrogenase. Plos One, 9, 2014
8I5Z	LDH Mutant P101Q-(An unexpected single-point mutation triggers the unleashing of catalytic potential of a NADH-dependent dehydrogenase) 分子名称: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 著者 Liu, J.Q. 登録日 2023-01-26 公開日 2023-09-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Characterization of the Pro101Gln mutation that enhances the catalytic performance of T. indicus NADH-dependent d-lactate dehydrogenase. Structure, 31, 2023
3N7U	NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana in complex with NAD and azide 分子名称: AZIDE ION, Formate dehydrogenase, GLYCEROL, ... 著者 Shabalin, I.G, Polyakov, K.M, Serov, A.E, Skirgello, O.E, Sadykhov, E.G, Dorovatovskiy, P.V, Tishkov, V.I, Popov, V.O. 登録日 2010-05-27 公開日 2010-06-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana To be Published
6ABI	The apo-structure of D-lactate dehydrogenase from Fusobacterium nucleatum 分子名称: D-lactate dehydrogenase, GLYCEROL, SULFATE ION 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2018-07-21 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria Biochemistry, 57, 2018
6ABJ	The apo-structure of D-lactate dehydrogenase from Pseudomonas aeruginosa 分子名称: ACETATE ION, D-lactate dehydrogenase (Fermentative) 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2018-07-21 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria Biochemistry, 57, 2018
6BII	Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW) 分子名称: GLYCEROL, Glyoxylate reductase, MALONATE ION, ... 著者 Lassalle, L, Shabalin, I.G, Girard, E, Minor, W. 登録日 2017-11-02 公開日 2018-01-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases. Sci Rep, 6, 2016
7KWM	CtBP1 (28-375) L182F/V185T - AMP 分子名称: ADENOSINE MONOPHOSPHATE, C-terminal-binding protein 1, CALCIUM ION 著者 Royer, W.E, Del Campo, M. 登録日 2020-12-01 公開日 2021-02-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 NAD(H) phosphates mediate tetramer assembly of human C-terminal binding protein (CtBP). J.Biol.Chem., 296, 2021
3NAQ	Apo-form of NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana 分子名称: Formate dehydrogenase, SULFATE ION 著者 Shabalin, I.G, Polyakov, K.M, Serov, A.E, Skirgello, O.E, Sadykhov, E.G, Dorovatovskiy, P.V, Tishkov, V.I, Popov, V.O. 登録日 2010-06-02 公開日 2010-07-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana to be published
3EVT	Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum 分子名称: Phosphoglycerate dehydrogenase 著者 Bonanno, J.B, Gilmore, M, Bain, K.T, Do, J, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2008-10-13 公開日 2008-10-21 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum To be Published
4EBF	SeMet thermostable phosphite dehydrogenase Glu175-Ala mutant 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase 著者 Zou, Y, Zhang, H, Nair, S.K. 登録日 2012-03-23 公開日 2012-05-30 最終更新日 2012-06-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012
4E5K	Thermostable phosphite dehydrogenase in complex with NAD and sulfite 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphite dehydrogenase (thermostable variant), SULFITE ION 著者 Zou, Y, Zhang, H, Nair, S.K. 登録日 2012-03-14 公開日 2012-05-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry, 51, 2012
6IH8	Crystal structure of Phosphite Dehydrogenase mutant I151R/P176R/M207A from Ralstonia sp. 4506 分子名称: Phosphite dehydrogenase 著者 Song, X, Feng, Y, Liu, Y, Zhao, Z. 登録日 2018-09-28 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor Acs Catalysis, 9, 2019
2CUK	Crystal structure of TT0316 protein from Thermus thermophilus HB8 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, glycerate dehydrogenase/glyoxylate reductase 著者 Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-05-26 公開日 2006-08-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of TT0316 protein from Thermus thermophilus HB8 To be Published
6PEX	An aldo keto reductase with 2-keto- L-gulonate reductase activity 分子名称: aldo keto reductase 著者 Yong, J, Crystal, S, Robert, D.H, John, B.B. 登録日 2019-06-21 公開日 2019-09-11 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.581 Å) 主引用文献 An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C inVitis vinifera. J.Biol.Chem., 294, 2019
6PLF	Crystal structure of human PHGDH complexed with Compound 1 分子名称: 1,2-ETHANEDIOL, 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid, D-3-phosphoglycerate dehydrogenase 著者 Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K. 登録日 2019-06-30 公開日 2019-07-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells. Bioorg.Med.Chem.Lett., 29, 2019
2D0I	Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 分子名称: dehydrogenase 著者 Lokanath, N.K, Terao, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-02 公開日 2006-02-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 To be Published
6JX1	Crystal structure of Formate dehydrogenase mutant V198I/C256I/P260S/E261P/S381N/S383F from Pseudomonas sp. 101 分子名称: Formate dehydrogenase, GLYCEROL 著者 Feng, Y, Xue, S, Guo, X, Zhao, Z. 登録日 2019-04-21 公開日 2020-05-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.233 Å) 主引用文献 Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor. Chemistry, 26, 2020
6JUK	Crystal structure of Formate dehydrogenase mutant C256I/E261P/S381I from Pseudomonas sp. 101 in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide 分子名称: Formate dehydrogenase, GLYCEROL, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate 著者 Feng, Y, Xue, S, Guo, X, Zhao, Z. 登録日 2019-04-14 公開日 2020-05-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.293 Å) 主引用文献 Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor. Chemistry, 26, 2020
6JUJ	Crystal structure of Formate dehydrogenase mutant V198I/C256I/P260S/E261P/S381N/S383F from Pseudomonas sp. 101in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide 分子名称: Formate dehydrogenase, GLYCEROL, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate 著者 Feng, Y, Guo, X, Xue, S, Zhao, Z. 登録日 2019-04-14 公開日 2020-05-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.183 Å) 主引用文献 Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor. Chemistry, 26, 2020
4DGS	The crystals structure of dehydrogenase from Rhizobium meliloti 分子名称: Dehydrogenase 著者 Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2012-01-26 公開日 2012-02-08 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The crystals structure of dehydrogenase from Rhizobium meliloti To be Published

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