PDB: 1523 件ウェブページステータス検索Chemie searchBIRD

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3ZDM	Crystal structure of the Sgt2 N domain and the Get5 UBL domain complex 分子名称: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT- CONTAINING PROTEIN 2, UBIQUITIN-LIKE PROTEIN MDY2 著者 Tung, J.-Y, Li, Y.-C, Hsiao, C.-D. 登録日 2012-11-29 公開日 2013-10-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.803 Å) 主引用文献 Structure of the Sgt2 Dimerization Domain Complexed with the Get5 Ubl Domain Involved in the Targeting of Tail-Anchored Membrane Proteins to the Endoplasmic Reticulum. Acta Crystallogr.,Sect.D, 69, 2013
4I6N	Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl ester 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, METHYL 4-AMINOBUTANOATE, SODIUM ION, ... 著者 Morrow, M.E, Ronau, J.A, White, R.R, Artavanis-Tsakonas, K, Das, C. 登録日 2012-11-29 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C-Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity. Biochemistry, 52, 2013
4I6L	Crystal structure of OTUB1 in complex with ubiquitin variant 分子名称: Ubiquitin, Ubiquitin thioesterase OTUB1 著者 Juang, Y.C, Sicheri, F. 登録日 2012-11-29 公開日 2013-01-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.488 Å) 主引用文献 A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
2M17	ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) 分子名称: Ubiquitin-like domain-containing CTD phosphatase 1 著者 Lee, W, Yun, J. 登録日 2012-11-19 公開日 2013-06-05 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase. Plos One, 8, 2013
4HXD	Diversity of ubiquitin and ISG15 specificity amongst nairoviruses viral ovarian tumor domain proteases 分子名称: 1.7.6 3-bromanylpropan-1-amine, Polyubiquitin-C, RNA-directed RNA polymerase L, ... 著者 Capodagli, G.C, Pegan, S.D. 登録日 2012-11-09 公開日 2013-02-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Diversity of Ubiquitin and ISG15 Specificity among Nairoviruses' Viral Ovarian Tumor Domain Proteases. J.Virol., 87, 2013
4HK2	U7Ub25.2540 分子名称: SULFATE ION, Ubiquitin 著者 Murray, J.M, Rouge, L. 登録日 2012-10-14 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization to be published
4HJK	U7Ub7 Disulfide variant 分子名称: PHOSPHATE ION, Ubiquitin 著者 Murray, J.M, Rouge, L. 登録日 2012-10-12 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.784 Å) 主引用文献 Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization to be published
4HCP	crystal structure of Burkholderia pseudomallei effector protein chbp in complex with nedd8 分子名称: GLYCEROL, NEDD8, Putative ATP/GTP binding protein, ... 著者 Yao, Q, Shao, F. 登録日 2012-10-01 公開日 2012-11-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis. Proc.Natl.Acad.Sci.USA, 109, 2012
4HCN	Crystal structure of Burkholderia pseudomallei effector protein CHBP in complex with ubiquitin 分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, PHOSPHATE ION, ... 著者 Yao, Q, Cui, J, Zhu, Y, Shao, F. 登録日 2012-09-30 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis. Proc.Natl.Acad.Sci.USA, 109, 2012
4BBN	NEDD4 HECT-Ub:Ub complex 分子名称: E3 UBIQUITIN-PROTEIN LIGASE NEDD4, POLYUBIQUITIN-B 著者 Maspero, E, Valentini, E, Mari, S, Cecatiello, V, Polo, S, Pasqualato, S. 登録日 2012-09-27 公開日 2013-05-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structure of a Ubiquitin-Loaded Hect Ligase Reveals the Molecular Basis for Catalytic Priming Nat.Struct.Mol.Biol., 20, 2013
2LZ6	Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional implications 分子名称: CD2-associated protein, Ubiquitin 著者 Ortega-Roldan, J, Azuaga, A, Blackledge, M, Van Nuland, N. 登録日 2012-09-24 公開日 2013-10-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Distinct Ubiquitin Binding Modes Exhibited by SH3 Domains: Molecular Determinants and Functional Implications. Plos One, 8, 2013
4B9K	pVHL-ELOB-ELOC complex_(2S,4R)-1-(3-amino-2-methylbenzoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide bound 分子名称: (2S,4R)-1-(3-amino-2-methylbenzoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ... 著者 Buckley, D.L, Gustafson, J.L, VanMolle, I, Roth, A.G, SeopTae, H, Gareiss, P.C, Jorgensen, W.L, Ciulli, A, Crews, C.M. 登録日 2012-09-05 公開日 2012-10-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Small-Molecule Inhibitors of the Interaction between the E3 Ligase Vhl and Hif1 Alpha Angew.Chem.Int.Ed.Engl., 51, 2012
4B95	pVHL-EloB-EloB-EloC complex_(2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide bound 分子名称: (2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ... 著者 Buckley, D.L, Gustafson, J.L, VanMolle, I, Roth, A.G, SeopTae, H, Gareiss, P.C, Jorgensen, W.L, Ciulli, A, Crews, C.M. 登録日 2012-08-31 公開日 2012-10-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Small-Molecule Inhibitors of the Interaction between the E3 Ligase Vhl and Hif1Alpha Angew.Chem.Int.Ed.Engl., 51, 2012
4GU2	Crystal structure of ubiquitin from Entamoeba histolytica to 1.35 Angstrom 分子名称: Ubiquitin 著者 Bosch, D.E, Siderovski, D.P. 登録日 2012-08-29 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
4GSW	Crystal structure of ubiquitin from Entamoeba histolytica to 2.15 Angstrom 分子名称: SULFATE ION, Ubiquitin 著者 Bosch, D.E, Siderovski, D.P. 登録日 2012-08-28 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
2LXA	Solution structure of the Get5 ubiquitin-like domain 分子名称: Ubiquitin-like protein MDY2 著者 Chartron, J.W, Vandervelde, D.G, Clemons Jr, W.M. 登録日 2012-08-19 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
2LXC	Solution structure of the complex between the Sgt2 homodimerization domain and the Get5 UBL domain 分子名称: Small glutamine-rich tetratricopeptide repeat-containing protein 2, Ubiquitin-like protein MDY2 著者 Chartron, J.W, Vandervelde, D.G, Clemons Jr, W.M. 登録日 2012-08-19 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
4GOC	Crystal structure of the Get5 ubiquitin-like domain 分子名称: Golgi to ER traffic protein 5 著者 Chartron, J.W, VanderVelde, D.G, Clemons Jr, W.M. 登録日 2012-08-19 公開日 2012-11-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
4GIV	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ183 分子名称: 3-(pyridin-3-yl)propyl (2S)-1-[(3-nitrophenyl)sulfonyl]piperidine-2-carboxylate, FORMIC ACID, Ubiquitin-like protein SMT3, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-08-09 公開日 2012-09-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
4V8T	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1 分子名称: 25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA, 5S RIBOSOMAL RNA, ... 著者 Greber, B.J, Boehringer, D, Montellese, C, Ban, N. 登録日 2012-08-07 公開日 2014-07-09 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Cryo-Em Structures of Arx1 and Maturation Factors Rei1 and Jjj1 Bound to the 60S Ribosomal Subunit Nat.Struct.Mol.Biol., 19, 2012
4GGQ	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with CJ40 分子名称: 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-08-07 公開日 2012-08-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
2LWP	The NMR solution structure of the the ubiquitin homology domain of mouse BAG-1 分子名称: BAG family molecular chaperone regulator 1 著者 Huang, H, Yu, C. 登録日 2012-08-05 公開日 2013-06-19 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The NMR solution structure of the ubiquitin homology domain of Bcl-2-associated athanogene 1 (BAG-1-UBH) from Mus musculus. Biochem.Biophys.Res.Commun., 431, 2013
4G50	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ168 分子名称: 1,2-ETHANEDIOL, 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, FORMIC ACID, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-07-17 公開日 2012-08-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
2LVQ	gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2LVO	Structure of the gp78CUE domain bound to monubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012

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