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6WVD
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BU of 6wvd by Molmil
Human JAGN1
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Green fluorescent protein, Protein jagunal homolog 1 chimera
著者Yang, Y, Liu, S, Li, W.
登録日2020-05-05
公開日2021-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Termini restraining of small membrane proteins enables structure determination at near-atomic resolution.
Sci Adv, 6, 2020
6WVN
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BU of 6wvn by Molmil
Crystal Structure of Nsp16-Nsp10 from SARS-CoV-2 in Complex with 7-methyl-GpppA and S-Adenosylmethionine.
分子名称: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, ADENINE, ...
著者Minasov, G, Shuvalova, L, Rosas-Lemus, M, Kiryukhina, O, Brunzelle, J.S, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-05-06
公開日2020-05-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design.
Sci.Signal., 13, 2020
3QXT
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BU of 3qxt by Molmil
Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody in Complex with Methotrexate
分子名称: Anti-Methotrexate CDR1-3 Graft VHH, METHOTREXATE, SODIUM ION
著者Fanning, S.W, Horn, J.R.
登録日2011-03-02
公開日2011-07-06
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop.
Protein Sci., 20, 2011
6WXC
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BU of 6wxc by Molmil
Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with potential repurposing drug Tipiracil
分子名称: 1,2-ETHANEDIOL, 5-CHLORO-6-(1-(2-IMINOPYRROLIDINYL) METHYL) URACIL, FORMIC ACID, ...
著者Kim, Y, Maltseva, N, Jedrzejczak, R, Welk, L, Endres, M, Chang, C, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-05-10
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Tipiracil binds to uridine site and inhibits Nsp15 endoribonuclease NendoU from SARS-CoV-2.
Commun Biol, 4, 2021
4KKL
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BU of 4kkl by Molmil
Structure of the E148A mutant of CLC-ec1 delta NC construct in 100mM fluoride
分子名称: FLUORIDE ION, Fab, heavy chain, ...
著者Stockbridge, R.B, Lim, H.-H, Miller, C.
登録日2013-05-06
公開日2013-08-21
最終更新日2013-12-04
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter.
Nat.Chem.Biol., 9, 2013
1E7J
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BU of 1e7j by Molmil
HMG-D complexed to a bulge DNA
分子名称: DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*CP*AP*AP*TP*AP*TP*CP*G)-3'), HIGH MOBILITY GROUP PROTEIN D
著者Cerdan, R, Payet, D, Yang, J.-C, Travers, A.A, Neuhaus, D.
登録日2000-08-29
公開日2001-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Hmg-D Complexed to a Bulge DNA: An NMR Model
Protein Sci., 10, 2001
4ZKB
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The chemokine binding protein of orf virus complexed with CCL3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-C motif chemokine 3, Chemokine binding protein, ...
著者Knapp, K.M, Nakatani, Y, Krause, K.L.
登録日2015-04-30
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of Orf Virus Chemokine Binding Protein in Complex with Host Chemokines Reveal Clues to Broad Binding Specificity.
Structure, 23, 2015
4KK3
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YwlE arginine phosphatase - wildtype
分子名称: Low molecular weight protein-tyrosine-phosphatase YwlE, PHOSPHATE ION
著者Fuhrmann, J, Clausen, T.
登録日2013-05-05
公開日2013-07-03
最終更新日2013-07-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for recognizing phosphoarginine and evolving residue-specific protein phosphatases in gram-positive bacteria.
Cell Rep, 3, 2013
4KK4
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YwlE arginine phosphatase - C7S mutant with phosphorylated active site serine
分子名称: Low molecular weight protein-tyrosine-phosphatase YwlE
著者Fuhrmann, J, Clausen, T.
登録日2013-05-05
公開日2013-07-03
最終更新日2013-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for recognizing phosphoarginine and evolving residue-specific protein phosphatases in gram-positive bacteria.
Cell Rep, 3, 2013
4ZLH
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Structure of the LapB cytoplasmic domain at 2 angstroms
分子名称: Lipopolysaccharide assembly protein B, ZINC ION
著者Prince, C.C, Jia, Z.
登録日2015-05-01
公開日2015-11-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An Unexpected Duo: Rubredoxin Binds Nine TPR Motifs to Form LapB, an Essential Regulator of Lipopolysaccharide Synthesis.
Structure, 23, 2015
4KNC
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BU of 4knc by Molmil
Structural and functional characterization of Pseudomonas aeruginosa AlgX
分子名称: Alginate biosynthesis protein AlgX
著者Riley, L.M, Weadge, J.T, Baker, P, Robinson, H, Codee, J.D.C, Tipton, P.A, Ohman, D.E, Howell, P.L.
登録日2013-05-09
公開日2013-06-26
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structural and Functional Characterization of Pseudomonas aeruginosa AlgX: ROLE OF AlgX IN ALGINATE ACETYLATION.
J.Biol.Chem., 288, 2013
4KKN
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Crystal structure of bovine CTLA-4, PSI-NYSGRC-012704
分子名称: Cytotoxic T-lymphocyte associated protein 4, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kumar, P.R, Ahmed, M, Banu, R, Bhosle, R, Bonanno, J, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Scott Glenn, A, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2013-05-06
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.253 Å)
主引用文献Crystal structure of bovine CTLA-4, PSI-NYSGRC-012704
to be published
4KKQ
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BU of 4kkq by Molmil
Crystal structure of Vibrio cholerae RbmA (crystal form 1)
分子名称: RbmA protein
著者Sondermann, H, Giglio, K.M.
登録日2013-05-06
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural Basis for Biofilm Formation via the Vibrio cholerae Matrix Protein RbmA.
J.Bacteriol., 195, 2013
4ZM1
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BU of 4zm1 by Molmil
Shigella flexneri lipopolysaccharide O-antigen chain-length regulator WzzBSF - wild type
分子名称: CITRIC ACID, Chain length determinant protein, MAGNESIUM ION
著者Ericsson, D.J, Chang, C.-W, Lonhienne, T, Casey, L, Benning, F, Kobe, B, Tran, E.N.H, Morona, R.
登録日2015-05-02
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and Biochemical Analysis of a Single Amino-Acid Mutant of WzzBSF That Alters Lipopolysaccharide O-Antigen Chain Length in Shigella flexneri.
Plos One, 10, 2015
6X3I
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BU of 6x3i by Molmil
NNAS Fc mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain, beta-D-mannopyranose
著者Wei, R, Zhou, Y.F.
登録日2020-05-21
公開日2020-09-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.268 Å)
主引用文献Engineered Fc-glycosylation switch to eliminate antibody effector function.
Mabs, 12, 2020
4KMA
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BU of 4kma by Molmil
Crystal structure of Drosophila Suppressor of Fused
分子名称: GM14141p
著者Zhang, Y, Qi, X, Zhang, Z, Wu, G.
登録日2013-05-08
公開日2013-11-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural insight into the mutual recognition and regulation between Suppressor of Fused and Gli/Ci.
Nat Commun, 4, 2013
4ZOH
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BU of 4zoh by Molmil
Crystal structure of glyceraldehyde oxidoreductase
分子名称: ACETIC ACID, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Nishimasu, H, Fushinobu, S, Wakagi, T.
登録日2015-05-06
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Archaeal Mo-Containing Glyceraldehyde Oxidoreductase Isozymes Exhibit Diverse Substrate Specificities through Unique Subunit Assemblies.
Plos One, 11, 2016
8B7V
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BU of 8b7v by Molmil
Automated simulation-based refinement of maltoporin into a cryo-EM density
分子名称: Maltoporin
著者Yvonnesdotter, L, Rovsnik, U, Blau, C, Lycksell, M, Howard, R.J, Lindahl, E.
登録日2022-10-03
公開日2023-06-21
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Automated simulation-based membrane protein refinement into cryo-EM data.
Biophys.J., 122, 2023
8BBY
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BU of 8bby by Molmil
VarB H/L (SLPL/SLPH) complex from C. difficile SlpA (R20291 strain)
分子名称: S-layer protein, SODIUM ION
著者Barwinska-Sendra, A, Salgado, P.S.
登録日2022-10-14
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献An intact S-layer is advantageous to Clostridioides difficile within the host.
Plos Pathog., 19, 2023
4KML
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BU of 4kml by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody
分子名称: Major prion protein, Nanobody
著者Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
登録日2013-05-08
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014
4ZP2
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BU of 4zp2 by Molmil
Crystal structure of E. coli multidrug transporter MdfA in complex with n-dodecyl-N,N-dimethylamine-N-oxide
分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Multidrug transporter MdfA
著者Zhang, X.C, Heng, J, Zhao, Y, Wang, X.
登録日2015-05-07
公開日2015-08-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate-bound structure of the E. coli multidrug resistance transporter MdfA
Cell Res., 25, 2015
4ZPA
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BU of 4zpa by Molmil
Coxsackievirus B3 Polymerase - F364Y mutant
分子名称: RNA-directed RNA polymerase, SULFATE ION
著者Peersen, O.B, McDonald, S.M.
登録日2015-05-07
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.665 Å)
主引用文献Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo.
J.Biol.Chem., 291, 2016
6WEN
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BU of 6wen by Molmil
Crystal Structure of ADP ribose phosphatase of NSP3 from SARS-CoV-2 in the apo form
分子名称: CHLORIDE ION, Non-structural protein 3
著者Michalska, K, Stols, L, Jedrzejczak, R, Endres, M, Babnigg, G, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-02
公開日2020-04-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structures of SARS-CoV-2 ADP-ribose phosphatase: from the apo form to ligand complexes.
Iucrj, 7, 2020
5AXM
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BU of 5axm by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
分子名称: MAGNESIUM ION, RNA (75-MER), tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
1E52
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Solution structure of Escherichia coli UvrB C-terminal domain
分子名称: EXCINUCLEASE ABC SUBUNIT
著者Alexandrovich, A.A, Kelly, G.G, Frenkiel, T.A, Moolenaar, G.F, Goosen, N.N, Sanderson, M.R, Lane, A.N.
登録日2000-07-14
公開日2001-07-12
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution Structure, Hydrodynamics and Thermodynamics of the Uvrb C-Terminal Domain.
J.Biomol.Struct.Dyn., 19, 2001

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