Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5T5H
DownloadVisualize
BU of 5t5h by Molmil
Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit
分子名称: 40S ribosomal protein L14, 5.8S rRNA, 5S rRNA, ...
著者Liu, Z, Gutierrez-Vargas, C, Wei, J, Grassucci, R.A, Ramesh, M, Espina, N, Sun, M, Tutuncuoglu, B, Madison-Antenucci, S, Woolford Jr, J.L, Tong, L, Frank, J.
登録日2016-08-31
公開日2016-10-12
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit.
Proc.Natl.Acad.Sci.USA, 113, 2016
6FDH
DownloadVisualize
BU of 6fdh by Molmil
Structure of H. salinarum RosR (vng0258) grown from KCl
分子名称: CHLORIDE ION, DNA binding protein, SULFATE ION
著者Shaanan, B, Kutnowski, N.
登録日2017-12-23
公開日2018-08-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The 3-D structure of VNG0258H/RosR - A haloarchaeal DNA-binding protein in its ionic shell.
J. Struct. Biol., 204, 2018
6LNZ
DownloadVisualize
BU of 6lnz by Molmil
NMR solution structure of VEGF G-quadruplex bound a non-planar cyclometalated-carbene platinum(II) complex
分子名称: DNA (5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), cyclometalated-carbene platinum(II) complex
著者Liu, W, Zhu, B.Z, Mao, Z.W.
登録日2020-01-02
公開日2021-01-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Selectivity and Targeting of G-Quadruplex Binders Activated by Adaptive Binding and Controlled by Chemical Kinetics.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZLU
DownloadVisualize
BU of 6zlu by Molmil
Closed-closed state of the Bt1762-Bt1763 levan transport system
分子名称: SusC homolog, SusD homolog
著者White, J.B.R, van den Berg, B, Ranson, N.A.
登録日2020-07-01
公開日2020-11-11
最終更新日2021-01-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6FAQ
DownloadVisualize
BU of 6faq by Molmil
Structure of H. salinarum RosR (vng0258) grown from KBr
分子名称: BROMIDE ION, DNA binding protein, SULFATE ION
著者Shaanan, B, Kutnowski, N.
登録日2017-12-16
公開日2018-08-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The 3-D structure of VNG0258H/RosR - A haloarchaeal DNA-binding protein in its ionic shell.
J. Struct. Biol., 204, 2018
6VJC
DownloadVisualize
BU of 6vjc by Molmil
LmFPPS mutant T164Y in complex with 476A, IPP & Ca
分子名称: 3-butyl-1-(2,2-diphosphonoethyl)pyridinium, ACETATE ION, CALCIUM ION, ...
著者Maheshwari, S, Kim, Y.S, Aripirala, S, Gabelli, S.B.
登録日2020-01-15
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Identifying Structural Determinants of Product Specificity in Leishmania major Farnesyl Diphosphate Synthase.
Biochemistry, 59, 2020
6W07
DownloadVisualize
BU of 6w07 by Molmil
Bruton's tyrosine kinase in complex with compound 1
分子名称: DIMETHYL SULFOXIDE, Tyrosine-protein kinase BTK, ~{N}-[[2-methyl-4-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]phenyl]methyl]-3-propan-2-yloxy-azetidine-1-carboxamide
著者Metrick, C.M, Marcotte, D.J.
登録日2020-02-29
公開日2020-12-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Discovery of BIIB068: A Selective, Potent, Reversible Bruton's Tyrosine Kinase Inhibitor as an Orally Efficacious Agent for Autoimmune Diseases.
J.Med.Chem., 63, 2020
7USE
DownloadVisualize
BU of 7use by Molmil
Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site
分子名称: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Ding, B, Yang, S, Chen, B, Chowdhury, S.
登録日2022-04-25
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
7USC
DownloadVisualize
BU of 7usc by Molmil
Cryo-EM structure of WAVE Regulatory Complex
分子名称: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, Nck-associated protein 1, ...
著者Ding, B, Yang, S, Chen, B, Chowdhury, S.
登録日2022-04-25
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
6T31
DownloadVisualize
BU of 6t31 by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, Streptavidin
著者Lechner, H, Hocker, B.
登録日2019-10-10
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
7USD
DownloadVisualize
BU of 7usd by Molmil
Cryo-EM structure of D-site Rac1-bound WAVE Regulatory Complex
分子名称: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Ding, B, Yang, S, Chen, B, Chowdhury, S.
登録日2022-04-25
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
6T3J
DownloadVisualize
BU of 6t3j by Molmil
Dual Epitope Targeting by Anti-DR5 Antibodies
分子名称: IgG1-hDR5-01-Heavy Chain, IgG1-hDR5-01-Light Chain, IgG1-hDR5-05-Heavy Chain, ...
著者Tauchert, M.J, Augustin, M, Krapp, S, Overdijk, M.B, Breij, E.C.W, Hibbert, R.G.
登録日2019-10-11
公開日2020-09-16
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Dual Epitope Targeting and Enhanced Hexamerization by DR5 Antibodies as a Novel Approach to Induce Potent Antitumor Activity Through DR5 Agonism.
Mol.Cancer Ther., 19, 2020
8V4F
DownloadVisualize
BU of 8v4f by Molmil
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
分子名称: CAB-A17 variable heavy-chain, CAB-A17 variable light chain, Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2023-11-29
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structural basis of broad SARS-CoV-2 cross-neutralization by affinity-matured public antibodies.
Cell Rep Med, 5, 2024
6T92
DownloadVisualize
BU of 6t92 by Molmil
NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex of N120C mutant protein with the reduced form of the cofactor NADH and the substrate formate at a secondary site.
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
著者Isupov, M.N, Yelmazer, B, De Rose, S.A, Littlechild, J.A.
登録日2019-10-25
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Structural insights into the NAD + -dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD + ternary complex of the Chaetomium thermophilum enzyme.
J.Struct.Biol., 212, 2020
6T8Z
DownloadVisualize
BU of 6t8z by Molmil
NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A ternary complex with the oxidised form of the cofactor NAD+ and the substrate formate both at a primary and secondary sites.
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
著者Isupov, M.N, Yelmazer, B, De Rose, S.A, Littlechild, J.A.
登録日2019-10-25
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Structural insights into the NAD + -dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD + ternary complex of the Chaetomium thermophilum enzyme.
J.Struct.Biol., 212, 2020
5LIH
DownloadVisualize
BU of 5lih by Molmil
Structure of a peptide-substrate bound to PKCiota core kinase domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MANGANESE (II) ION, ...
著者Soriano, E.V, Purkiss, A.G, McDonald, N.Q.
登録日2016-07-14
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.
Dev.Cell, 38, 2016
6TBI
DownloadVisualize
BU of 6tbi by Molmil
Structure of a beta galactosidase with inhibitor
分子名称: (1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol, ACETATE ION, Beta-galactosidase, ...
著者Offen, W, Davies, G.
登録日2019-11-01
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
6NYB
DownloadVisualize
BU of 6nyb by Molmil
Structure of a MAPK pathway complex
分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, ...
著者Park, E, Rawson, S, Li, K, Jeon, H, Eck, M.J.
登録日2019-02-11
公開日2019-10-09
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
8BGS
DownloadVisualize
BU of 8bgs by Molmil
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Behr, T.S, Ryskeldi-Falcon, B.
登録日2022-10-28
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
6W1A
DownloadVisualize
BU of 6w1a by Molmil
Crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2 bound to DNA
分子名称: DNA (30-MER), GLYCEROL, PHOSPHATE ION, ...
著者Capodagli, G.C, Neiditch, M.B.
登録日2020-03-03
公開日2020-10-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
Proc.Natl.Acad.Sci.USA, 117, 2020
8BGV
DownloadVisualize
BU of 8bgv by Molmil
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Behr, T.S, Ryskeldi-Falcon, B.
登録日2022-10-28
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
6R9N
DownloadVisualize
BU of 6r9n by Molmil
Peroxy diiron species of chemotaxis sensor ODP
分子名称: CHLORIDE ION, FE (III) ION, OXYGEN ATOM, ...
著者Muok, A.R, Crane, B.R.
登録日2019-04-03
公開日2019-06-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.074 Å)
主引用文献A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species.
Proc.Natl.Acad.Sci.USA, 116, 2019
6VO6
DownloadVisualize
BU of 6vo6 by Molmil
Crystal Structure of Cj1427, an Essential NAD-dependent Dehydrogenase from Campylobacter jejuni, in the Presence of NADH and GDP
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, ...
著者Anderson, T.K, Spencer, K.D, Thoden, J.B, Huddleston, J.P, Raushel, F.M, Holden, H.M.
登録日2020-01-30
公開日2020-04-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides ofCampylobacter jejuni.
Biochemistry, 59, 2020
5K78
DownloadVisualize
BU of 5k78 by Molmil
Dbr1 in complex with 16-mer branched RNA
分子名称: FE (II) ION, RNA lariat debranching enzyme, putative, ...
著者Clark, N.E, Taylor, A.B, Hart, P.J.
登録日2016-05-25
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献The RNA lariat debranching enzyme Dbr1: metal dependence and branched RNA co-crystal structures
Proc.Natl.Acad.Sci.USA, 2016
8DN0
DownloadVisualize
BU of 8dn0 by Molmil
E.coli DsbA in complex with N-(2-fluorophenyl)-5-methylisoxazole-3-carboxamide
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, N-(2-fluorophenyl)-5-methyl-1,2-oxazole-3-carboxamide, ...
著者Wang, G, Heras, B.
登録日2022-07-10
公開日2023-06-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献E.coli DsbA in complex with N-(2-fluorophenyl)-5-methylisoxazole-3-carboxamide
To Be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon