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8F9N
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BU of 8f9n by Molmil
H64A swMb-iPrNO adduct
分子名称: 2-nitrosopropane, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Herrera, V.E, Thomas, L.M.
登録日2022-11-24
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8F9H
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BU of 8f9h by Molmil
H64A swMb-MeNO adduct
分子名称: Myoglobin, NITROSOMETHANE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Herrera, V.E, Thomas, L.M.
登録日2022-11-23
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
7SVW
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BU of 7svw by Molmil
Strand-transfer complex of TnsB from ShCAST
分子名称: MAGNESIUM ION, STC_LE_For, STC_LE_Rev1, ...
著者Park, J, Tsai, A.W.T, Kellogg, E.H.
登録日2021-11-19
公開日2022-08-10
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Mechanistic details of CRISPR-associated transposon recruitment and integration revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
8F9I
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BU of 8f9i by Molmil
H64A swMb-EtNO adduct
分子名称: Myoglobin, NITROSOETHANE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Herrera, V.E, Thomas, L.N.
登録日2022-11-23
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8F9J
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BU of 8f9j by Molmil
H64A swMb-PrNO adduct
分子名称: 1-nitrosopropane, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Herrera, V.E, Thomas, L.M.
登録日2022-11-23
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8DF2
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BU of 8df2 by Molmil
The structure of the 'ALT' construct of the Amuc_1438 glycopeptidase
分子名称: CALCIUM ION, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
8DEK
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BU of 8dek by Molmil
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438
分子名称: 1,2-ETHANEDIOL, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-20
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
6ET9
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BU of 6et9 by Molmil
Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyl-CoA acetyltransferase thiolase, CHLORIDE ION, ...
著者Engilberge, S, Voegeli, B, Girard, E, Riobe, F, Maury, O, Erb, T.J, Shima, S, Wagner, T.
登録日2017-10-25
公開日2018-03-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6VGI
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BU of 6vgi by Molmil
Crystal Structures of FLAP bound to MK-866
分子名称: 3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic acid, 5-lipoxygenase-activating protein, SULFATE ION
著者Ho, J.D, Lee, M.R, Rauch, C.T, Aznavour, K, Park, J.S, Luz, J.G, Antonysamy, S, Condon, B, Maletic, M, Zhang, A, Hickey, M.J, Hughes, N.E, Chandrasekhar, S, Sloan, A.V, Gooding, K, Harvey, A, Yu, X.P, Kahl, S.D, Norman, B.H.
登録日2020-01-08
公開日2020-12-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP).
Biochim Biophys Acta Gen Subj, 1865, 2020
8D27
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BU of 8d27 by Molmil
Arginase Domain of Ornithine Decarboxylase/Arginase from Fusobacterium nucleatum
分子名称: Arginase
著者Chan, A.C, Kolesnikov, M, Murphy, M.E.
登録日2022-05-27
公開日2022-07-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Sequence Divergence in the Arginase Domain of Ornithine Decarboxylase/Arginase in Fusobacteriacea Leads to Loss of Function in Oral Associated Species.
Biochemistry, 61, 2022
4YB5
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BU of 4yb5 by Molmil
Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni in complex with the allosteric inhibitor histidine
分子名称: ATP phosphoribosyltransferase, DI(HYDROXYETHYL)ETHER, HISTIDINE, ...
著者Mittelstaedt, G, Moggre, G.-J, Parker, E.J.
登録日2015-02-18
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Campylobacter jejuni adenosine triphosphate phosphoribosyltransferase is an active hexamer that is allosterically controlled by the twisting of a regulatory tail.
Protein Sci., 25, 2016
7AH0
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BU of 7ah0 by Molmil
Crystal structure of the de novo designed two-heme binding protein, 4D2
分子名称: 4D2, PROTOPORPHYRIN IX CONTAINING FE
著者Hutchins, G.H, Parnell, A.E, Anderson, J.L.R.
登録日2020-09-23
公開日2021-10-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献An expandable, modular de novo protein platform for precision redox engineering.
Proc.Natl.Acad.Sci.USA, 120, 2023
4YEG
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BU of 4yeg by Molmil
Characterisation of Polyphosphate Kinase 2 from the Intracellular Pathogen Francisella tularensis
分子名称: Polyphosphate kinase 2
著者Parnell, A.E, Roach, P.L.
登録日2015-02-24
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Biochemical and structural characterization of polyphosphate kinase 2 from the intracellular pathogen Francisella tularensis.
Biosci.Rep., 36, 2016
8QYO
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BU of 8qyo by Molmil
Human proteasome 20S core particle
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Schulman, B.A, Hanna, J.W, Harper, J.W, Adolf, F, Du, J, Rawson, S.D, Walsh Jr, R.M, Goodall, E.A.
登録日2023-10-26
公開日2024-02-21
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Visualizing chaperone-mediated multistep assembly of the human 20S proteasome.
Nat.Struct.Mol.Biol., 2024
5F7Q
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BU of 5f7q by Molmil
ROK repressor Lmo0178 from Listeria monocytogenes bound to operator
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Light, S.H, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-12-08
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure to function of an alpha-glucan metabolic pathway that promotes Listeria monocytogenes pathogenesis.
Nat Microbiol, 2, 2016
8B1R
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BU of 8b1r by Molmil
RecBCD in complex with the phage protein gp5.9
分子名称: MAGNESIUM ION, Probable RecBCD inhibitor gp5.9, RecBCD enzyme subunit RecB, ...
著者Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
登録日2022-09-12
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
8J6L
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BU of 8j6l by Molmil
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound niacin
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Yuan, Q, Zhu, S, Duan, J, Xu, H.E, Duan, X.
登録日2023-04-26
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Molecular recognition of niacin and lipid-lowering drugs by the human hydroxycarboxylic acid receptor 2.
Cell Rep, 42, 2023
4DR3
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BU of 4dr3 by Molmil
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with streptomycin bound
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2012-02-16
公開日2012-11-14
最終更新日2013-01-30
実験手法X-RAY DIFFRACTION (3.348 Å)
主引用文献A structural basis for streptomycin-induced misreading of the genetic code.
Nat Commun, 4, 2013
5FNU
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BU of 5fnu by Molmil
Structure of the Keap1 Kelch domain in complex with a small molecule inhibitor.
分子名称: (3S)-3-(7-methoxy-1-methyl-1H-benzo[d][1,2,3]triazol-5-yl)-3-(4-methyl-3-(((R)-4-methyl-1,1-dioxido-3,4-dihydro-2H-benzo[b][1,4,5]oxathiazepin-2-yl)methyl)phenyl)propanoic acid, CHLORIDE ION, KELCH-LIKE ECH-ASSOCIATED PROTEIN 1
著者Davies, T.G, Wixted, W.E, Coyle, J.E, Griffiths-Jones, C, Hearn, K, McMenamin, R, Norton, D, Rich, S.J, Richardson, C, Saxty, G, Willems, H.M.G, Woolford, A.J, Cottom, J.E, Kou, J, Yonchuk, J.G, Feldser, H.G, Sanchez, Y, Foley, J.P, Bolognese, B.J, Logan, G, Podolin, P.L, Yan, H, Callahan, J.F, Heightman, T.D, Kerns, J.K.
登録日2015-11-16
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Mono-Acidic Inhibitors of the Kelch-Like Ech-Associated Protein 1 : Nuclear Factor Erythroid 2-Related Factor 2 (Keap1:Nrf2) Protein-Protein Interaction with High Cell Potency Identified by Fragment-Based Discovery.
J.Med.Chem., 59, 2016
8UWB
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BU of 8uwb by Molmil
Crystal structure of PP2A PPP2R1A-PPP2CA-PPP2R5E phosphatase.
分子名称: MANGANESE (II) ION, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Wachter, F, Nowak, R.P, Fischer, E.S.
登録日2023-11-06
公開日2024-04-17
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural characterization of methylation-independent PP2A assembly guides alphafold2Multimer prediction of family-wide PP2A complexes.
J.Biol.Chem., 300, 2024
8B1T
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BU of 8b1t by Molmil
RecBCD-DNA in complex with the phage protein Abc2
分子名称: Anti-RecBCD protein 2, DNA (70-MER), MAGNESIUM ION, ...
著者Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
登録日2022-09-12
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
8FHW
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BU of 8fhw by Molmil
Cryo-EM structure of Cryptococcus neoformans trehalose-6-phosphate synthase homotetramer in complex with uridine diphosphate and glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Alpha,alpha-trehalose-phosphate synthase (UDP-forming), URIDINE-5'-DIPHOSPHATE
著者Washington, E.J, Brennan, R.G.
登録日2022-12-15
公開日2023-12-20
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of trehalose-6-phosphate synthase, Tps1, from the fungal pathogen Cryptococcus neoformans : a target for novel antifungals.
Biorxiv, 2024
8R4X
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BU of 8r4x by Molmil
Structure of Chitinase-3-like protein 1 in complex with inhibitor 30
分子名称: (2~{S},5~{S})-4-[1-(4-chloranylpyridin-2-yl)piperidin-4-yl]-5-[(4-chlorophenyl)methyl]-2-methyl-morpholine, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-14
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8JND
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BU of 8jnd by Molmil
The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JNE
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BU of 8jne by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome without the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.68 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024

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